RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 RPL35P42766 123 aaKnown RBP4.73□□□□□ -1.65
TCF4-258ENST00000627320 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
TCF4-258ENST00000627320 MRPL52Q86TS9 123 aaKnown RBP4.73□□□□□ -1.65
TCF4-258ENST00000627320 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
TCF4-258ENST00000627320 XAGE1AQ9HD64 81 aa4.73□□□□□ -1.65
TCF4-258ENST00000627320 GAGE10A6NGK3 116 aa4.72□□□□□ -1.65
TCF4-258ENST00000627320 C1orf196B1AJZ1 125 aa4.72□□□□□ -1.65
TCF4-258ENST00000627320 SMKR1H3BMG3 65 aa4.72□□□□□ -1.65
TCF4-258ENST00000627320 SEC61BP60468 96 aaKnown RBP4.72□□□□□ -1.65
TCF4-258ENST00000627320 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
TCF4-258ENST00000627320 KRTAP13-1Q8IUC0 172 aa4.72□□□□□ -1.65
TCF4-258ENST00000627320 ENKURQ8TC29 256 aa4.72□□□□□ -1.65
TCF4-258ENST00000627320 IMMP2LQ96T52 175 aa4.72□□□□□ -1.65
TCF4-258ENST00000627320 NKX6-2Q9C056 277 aaPredicted RBP4.72□□□□□ -1.65
TCF4-258ENST00000627320 UBE2D4Q9Y2X8 147 aa4.72□□□□□ -1.65
TCF4-258ENST00000627320 TRBV20OR9-2A0A075B6H5 130 aa4.71□□□□□ -1.66
TCF4-258ENST00000627320 BCE1O60756 84 aa4.71□□□□□ -1.66
TCF4-258ENST00000627320 SCO1O75880 301 aa4.71□□□□□ -1.66
TCF4-258ENST00000627320 AKR1C8PQ5T2L2 129 aa4.71□□□□□ -1.66
TCF4-258ENST00000627320 TMUB2Q71RG4 321 aa4.71□□□□□ -1.66
TCF4-258ENST00000627320 OR10D4PQ8NGN7 298 aa4.71□□□□□ -1.66
TCF4-258ENST00000627320 C7orf77A4D0Y5 90 aa4.7□□□□□ -1.66
TCF4-258ENST00000627320 M0R2T5 61 aa4.7□□□□□ -1.66
TCF4-258ENST00000627320 NUPR1O60356 82 aa4.7□□□□□ -1.66
TCF4-258ENST00000627320 IFNA1P01562 189 aa4.7□□□□□ -1.66
TCF4-258ENST00000627320 RPL28P46779 137 aaKnown RBP4.7□□□□□ -1.66
TCF4-258ENST00000627320 BLOC1S1P78537 153 aa4.7□□□□□ -1.66
TCF4-258ENST00000627320 DAND5Q8N907 189 aa4.7□□□□□ -1.66
TCF4-258ENST00000627320 MARVELD1Q9BSK0 173 aa4.7□□□□□ -1.66
TCF4-258ENST00000627320 IGHV3OR16-9A0A0B4J2B5 98 aa4.69□□□□□ -1.66
TCF4-258ENST00000627320 RPL39P62891 51 aaKnown RBP4.69□□□□□ -1.66
TCF4-258ENST00000627320 PRLHP81277 87 aa4.69□□□□□ -1.66
TCF4-258ENST00000627320 IGKV2D-26A0A0A0MRZ7 120 aa4.68□□□□□ -1.66
TCF4-258ENST00000627320 NDUFC2-KCTD14E9PQ53 114 aa4.68□□□□□ -1.66
TCF4-258ENST00000627320 POLR2KP53803 58 aaKnown RBP4.68□□□□□ -1.66
TCF4-258ENST00000627320 RPS20P60866 119 aaKnown RBP4.68□□□□□ -1.66
TCF4-258ENST00000627320 CCL20P78556 96 aa4.68□□□□□ -1.66
TCF4-258ENST00000627320 C9orf62Q8N4C0 152 aa4.68□□□□□ -1.66
TCF4-258ENST00000627320 LINC00167Q96N53 147 aa4.68□□□□□ -1.66
TCF4-258ENST00000627320 CCDC32Q9BV29 185 aa4.68□□□□□ -1.66
TCF4-258ENST00000627320 CYTL1Q9NRR1 136 aa4.68□□□□□ -1.66
TCF4-258ENST00000627320 TRBV6-5A0A0K0K1A5 114 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 F2Z2F3 143 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 FAM229BQ4G0N7 80 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 PCOTHQ58A44 107 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 FAM213BQ8TBF2 198 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 SFT2D1Q8WV19 159 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 TCEAL7Q9BRU2 100 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 CNFNQ9BYD5 112 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 ST20Q9HBF5 79 aa4.67□□□□□ -1.66
TCF4-258ENST00000627320 FXYD6-FXYD2A0A087WZ82 144 aa4.66□□□□□ -1.66
TCF4-258ENST00000627320 K7EN84 100 aa4.66□□□□□ -1.66
TCF4-258ENST00000627320 PFDN1O60925 122 aa4.66□□□□□ -1.66
TCF4-258ENST00000627320 S100A9P06702 114 aaKnown RBP4.66□□□□□ -1.66
TCF4-258ENST00000627320 TMEM241Q24JQ0 296 aa4.66□□□□□ -1.66
TCF4-258ENST00000627320 MRPL55Q7Z7F7 128 aaKnown RBP4.66□□□□□ -1.66
TCF4-258ENST00000627320 KCNRGQ8N5I3 272 aa4.66□□□□□ -1.66
TCF4-258ENST00000627320 NEBP20929 6669 aa4.66□□□□□ -1.66
TCF4-258ENST00000627320 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
TCF4-258ENST00000627320 TRBV27A0A0K0K1C4 114 aa4.65□□□□□ -1.67
TCF4-258ENST00000627320 UPK1BO75841 260 aa4.65□□□□□ -1.67
TCF4-258ENST00000627320 UBE2AP49459 152 aa4.65□□□□□ -1.67
TCF4-258ENST00000627320 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
TCF4-258ENST00000627320 FP248Q71RG6 208 aaPredicted RBP4.65□□□□□ -1.67
TCF4-258ENST00000627320 C11orf52Q96A22 123 aa4.65□□□□□ -1.67
TCF4-258ENST00000627320 IGKV2-28A0A075B6P5 120 aa4.64□□□□□ -1.67
TCF4-258ENST00000627320 BORCS7-ASMTA0A0B4J1R7 106 aa4.64□□□□□ -1.67
TCF4-258ENST00000627320 ZNF727A8MUV8 499 aa4.64□□□□□ -1.67
TCF4-258ENST00000627320 IGKV2D-28P01615 120 aa4.64□□□□□ -1.67
TCF4-258ENST00000627320 AMN1Q8IY45 258 aa4.64□□□□□ -1.67
TCF4-258ENST00000627320 TRBV30A0A0K0K1B3 111 aa4.63□□□□□ -1.67
TCF4-258ENST00000627320 TMEM238C9JI98 176 aa4.63□□□□□ -1.67
TCF4-258ENST00000627320 GIPP09681 153 aaPredicted RBP4.63□□□□□ -1.67
TCF4-258ENST00000627320 FCER1GP30273 86 aa4.63□□□□□ -1.67
TCF4-258ENST00000627320 GNG4P50150 75 aa4.63□□□□□ -1.67
TCF4-258ENST00000627320 RPL32P62910 135 aaKnown RBP4.63□□□□□ -1.67
TCF4-258ENST00000627320 PNRC1Q12796 327 aaPredicted RBP4.63□□□□□ -1.67
TCF4-258ENST00000627320 Q8NBF4 154 aa4.63□□□□□ -1.67
TCF4-258ENST00000627320 MBD3L1Q8WWY6 194 aa4.63□□□□□ -1.67
TCF4-258ENST00000627320 PACRGQ96M98 296 aaPredicted RBP4.63□□□□□ -1.67
TCF4-258ENST00000627320 GNG13Q9P2W3 67 aa4.63□□□□□ -1.67
TCF4-258ENST00000627320 IFITM10A6NMD0 228 aa4.62□□□□□ -1.67
TCF4-258ENST00000627320 SMLR1H3BR10 107 aa4.62□□□□□ -1.67
TCF4-258ENST00000627320 RAB4AP20338 218 aa4.62□□□□□ -1.67
TCF4-258ENST00000627320 NRACQ8N912 160 aa4.62□□□□□ -1.67
TCF4-258ENST00000627320 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
TCF4-258ENST00000627320 TOMM7Q9P0U1 55 aa4.62□□□□□ -1.67
TCF4-258ENST00000627320 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
TCF4-258ENST00000627320 LBHQ53QV2 105 aaPredicted RBP4.61□□□□□ -1.67
TCF4-258ENST00000627320 XKRY2A2RUG3 117 aa4.6□□□□□ -1.67
TCF4-258ENST00000627320 F8WDY8 70 aa4.6□□□□□ -1.67
TCF4-258ENST00000627320 FAM19A1Q7Z5A9 133 aa4.6□□□□□ -1.67
TCF4-258ENST00000627320 PLEKHB2Q96CS7 222 aa4.6□□□□□ -1.67
TCF4-258ENST00000627320 ARPC5O15511 151 aa4.59□□□□□ -1.67
TCF4-258ENST00000627320 SUMO2P61956 95 aaKnown RBP4.59□□□□□ -1.67
TCF4-258ENST00000627320 TGIF2-C20orf24A0A0A6YYL0 155 aa4.58□□□□□ -1.68
TCF4-258ENST00000627320 TCAPO15273 167 aa4.58□□□□□ -1.68
TCF4-258ENST00000627320 HBBP68871 147 aa4.58□□□□□ -1.68
TCF4-258ENST00000627320 TEX261Q6UWH6 196 aa4.58□□□□□ -1.68
TCF4-258ENST00000627320 SMIM15Q7Z3B0 74 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms