RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 TMEM242Q9NWH2 141 aa4.09□□□□□ -1.75
LINC00963-218ENST00000624138 UBE2D4Q9Y2X8 147 aa4.09□□□□□ -1.75
LINC00963-218ENST00000624138 C22orf24Q9Y442 160 aa4.09□□□□□ -1.75
LINC00963-218ENST00000624138 TRBV30A0A0K0K1B3 111 aa4.08□□□□□ -1.76
LINC00963-218ENST00000624138 TRBV27A0A0K0K1C4 114 aa4.08□□□□□ -1.76
LINC00963-218ENST00000624138 PFDN1O60925 122 aa4.08□□□□□ -1.76
LINC00963-218ENST00000624138 FOXA3P55318 350 aaPredicted RBP4.08□□□□□ -1.76
LINC00963-218ENST00000624138 LBHQ53QV2 105 aaPredicted RBP4.08□□□□□ -1.76
LINC00963-218ENST00000624138 RNASE13Q5GAN3 156 aaKnown RBP4.08□□□□□ -1.76
LINC00963-218ENST00000624138 MBD3L1Q8WWY6 194 aa4.08□□□□□ -1.76
LINC00963-218ENST00000624138 SMIM12Q96EX1 92 aa4.08□□□□□ -1.76
LINC00963-218ENST00000624138 ST20Q9HBF5 79 aa4.08□□□□□ -1.76
LINC00963-218ENST00000624138 IGKV2D-26A0A0A0MRZ7 120 aa4.07□□□□□ -1.76
LINC00963-218ENST00000624138 SMAGPQ0VAQ4 97 aa4.07□□□□□ -1.76
LINC00963-218ENST00000624138 CENPWQ5EE01 88 aa4.07□□□□□ -1.76
LINC00963-218ENST00000624138 KRTAP13-1Q8IUC0 172 aa4.07□□□□□ -1.76
LINC00963-218ENST00000624138 C11orf52Q96A22 123 aa4.07□□□□□ -1.76
LINC00963-218ENST00000624138 UPK1BO75841 260 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 IFITM3Q01628 133 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 Q5BKY6 102 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 SPAG11AQ6PDA7 123 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 Q6ZUT4 128 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 SMIM15Q7Z3B0 74 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 NUDT10Q8NFP7 164 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 FAM104AQ969W3 186 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 NUDT11Q96G61 164 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 PACRGQ96M98 296 aaPredicted RBP4.06□□□□□ -1.76
LINC00963-218ENST00000624138 TIMM21Q9BVV7 248 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 TP73-AS1Q9UF72 201 aa4.06□□□□□ -1.76
LINC00963-218ENST00000624138 RAB19A4D1S5 217 aa4.05□□□□□ -1.76
LINC00963-218ENST00000624138 CCL20P78556 96 aa4.05□□□□□ -1.76
LINC00963-218ENST00000624138 LINC00299Q6ZSB3 139 aa4.05□□□□□ -1.76
LINC00963-218ENST00000624138 KCNRGQ8N5I3 272 aa4.05□□□□□ -1.76
LINC00963-218ENST00000624138 SFT2D1Q8WV19 159 aa4.05□□□□□ -1.76
LINC00963-218ENST00000624138 BIN3Q9NQY0 253 aa4.05□□□□□ -1.76
LINC00963-218ENST00000624138 ZNF727A8MUV8 499 aa4.04□□□□□ -1.76
LINC00963-218ENST00000624138 VCYO14598 125 aa4.04□□□□□ -1.76
LINC00963-218ENST00000624138 GNG4P50150 75 aa4.04□□□□□ -1.76
LINC00963-218ENST00000624138 C2orf82Q6UX34 121 aa4.04□□□□□ -1.76
LINC00963-218ENST00000624138 MRPL55Q7Z7F7 128 aaKnown RBP4.04□□□□□ -1.76
LINC00963-218ENST00000624138 S100ZQ8WXG8 99 aa4.04□□□□□ -1.76
LINC00963-218ENST00000624138 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
LINC00963-218ENST00000624138 TRBV20OR9-2A0A075B6H5 130 aa4.03□□□□□ -1.76
LINC00963-218ENST00000624138 A0A1B0GV50 99 aa4.03□□□□□ -1.76
LINC00963-218ENST00000624138 FCER1GP30273 86 aa4.03□□□□□ -1.76
LINC00963-218ENST00000624138 XP32Q5T750 250 aa4.03□□□□□ -1.76
LINC00963-218ENST00000624138 C3orf22Q8N5N4 141 aa4.03□□□□□ -1.76
LINC00963-218ENST00000624138 LINC00167Q96N53 147 aa4.03□□□□□ -1.76
LINC00963-218ENST00000624138 A0A1B0GVG6 124 aa4.02□□□□□ -1.77
LINC00963-218ENST00000624138 LINC00469Q8N7U9 141 aa4.02□□□□□ -1.77
LINC00963-218ENST00000624138 FAM213BQ8TBF2 198 aa4.02□□□□□ -1.77
LINC00963-218ENST00000624138 TMEM18Q96B42 140 aa4.02□□□□□ -1.77
LINC00963-218ENST00000624138 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
LINC00963-218ENST00000624138 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
LINC00963-218ENST00000624138 UMAD1C9J7I0 102 aa4.01□□□□□ -1.77
LINC00963-218ENST00000624138 RAB4AP20338 218 aa4.01□□□□□ -1.77
LINC00963-218ENST00000624138 UBE2AP49459 152 aa4.01□□□□□ -1.77
LINC00963-218ENST00000624138 MRPS36P82909 103 aaKnown RBP4.01□□□□□ -1.77
LINC00963-218ENST00000624138 TMEM191AQ9H0A3 160 aa4.01□□□□□ -1.77
LINC00963-218ENST00000624138 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
LINC00963-218ENST00000624138 MANBALQ9NQG1 85 aa4.01□□□□□ -1.77
LINC00963-218ENST00000624138 FXYD6-FXYD2A0A087WZ82 144 aa4□□□□□ -1.77
LINC00963-218ENST00000624138 TGIF2-C20orf24A0A0A6YYL0 155 aa4□□□□□ -1.77
LINC00963-218ENST00000624138 GAGE10A6NGK3 116 aa4□□□□□ -1.77
LINC00963-218ENST00000624138 GIPP09681 153 aaPredicted RBP4□□□□□ -1.77
LINC00963-218ENST00000624138 H2AFB1P0C5Y9 115 aa4□□□□□ -1.77
LINC00963-218ENST00000624138 RPL39P62891 51 aaKnown RBP4□□□□□ -1.77
LINC00963-218ENST00000624138 LINC01561Q8N1V8 128 aa4□□□□□ -1.77
LINC00963-218ENST00000624138 DAND5Q8N907 189 aa4□□□□□ -1.77
LINC00963-218ENST00000624138 NRACQ8N912 160 aa4□□□□□ -1.77
LINC00963-218ENST00000624138 KIR2DL4Q99706 377 aa4□□□□□ -1.77
LINC00963-218ENST00000624138 K7EN84 100 aa3.99□□□□□ -1.77
LINC00963-218ENST00000624138 SUMO2P61956 95 aaKnown RBP3.99□□□□□ -1.77
LINC00963-218ENST00000624138 HBBP68871 147 aa3.99□□□□□ -1.77
LINC00963-218ENST00000624138 PLEKHB2Q96CS7 222 aa3.99□□□□□ -1.77
LINC00963-218ENST00000624138 SPANXA1Q9NS26 97 aa3.99□□□□□ -1.77
LINC00963-218ENST00000624138 GNG13Q9P2W3 67 aa3.99□□□□□ -1.77
LINC00963-218ENST00000624138 IGLV5-37A0A075B6J1 123 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 IFITM10A6NMD0 228 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 SMKR1H3BMG3 65 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 M0R2T5 61 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 PPP1R2P9O14990 202 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 PDE6DO43924 150 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 PPP1R17O96001 155 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 RPL32P62910 135 aaKnown RBP3.98□□□□□ -1.77
LINC00963-218ENST00000624138 PNRC1Q12796 327 aaPredicted RBP3.98□□□□□ -1.77
LINC00963-218ENST00000624138 PET117Q6UWS5 81 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 AMN1Q8IY45 258 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 OCC1Q8TAD7 63 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 MED9Q9NWA0 146 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 NDUFA13Q9P0J0 144 aa3.98□□□□□ -1.77
LINC00963-218ENST00000624138 A8MWL6 223 aa3.97□□□□□ -1.77
LINC00963-218ENST00000624138 SPINK1P00995 79 aa3.97□□□□□ -1.77
LINC00963-218ENST00000624138 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
LINC00963-218ENST00000624138 USH2AO75445 5202 aa3.97□□□□□ -1.77
LINC00963-218ENST00000624138 IGLV8-61A0A075B6I0 122 aa3.96□□□□□ -1.78
LINC00963-218ENST00000624138 A0A1B0GUT8 65 aa3.96□□□□□ -1.78
LINC00963-218ENST00000624138 TCAPO15273 167 aa3.96□□□□□ -1.78
LINC00963-218ENST00000624138 ARPC5O15511 151 aa3.96□□□□□ -1.78
LINC00963-218ENST00000624138 GATCO43716 136 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms