RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 TULP4Q9NRJ4 1543 aa2.41□□□□□ -2.02
ATRX-212ENST00000623706 FER1L6Q2WGJ9 1857 aa2.41□□□□□ -2.02
ATRX-212ENST00000623706 ROBO1Q9Y6N7 1651 aa2.41□□□□□ -2.02
ATRX-212ENST00000623706 PATE3B3GLJ2 98 aa2.4□□□□□ -2.02
ATRX-212ENST00000623706 EIF4EBP1Q13541 118 aaPredicted RBP2.4□□□□□ -2.02
ATRX-212ENST00000623706 C17orf58Q2M2W7 97 aa2.4□□□□□ -2.02
ATRX-212ENST00000623706 Q6ZR54 194 aa2.4□□□□□ -2.02
ATRX-212ENST00000623706 LINC01006Q8NI28 216 aa2.4□□□□□ -2.02
ATRX-212ENST00000623706 ABCA4P78363 2273 aa2.4□□□□□ -2.02
ATRX-212ENST00000623706 WT1-ASQ06250 92 aa2.4□□□□□ -2.02
ATRX-212ENST00000623706 Q8N1X5 172 aa2.4□□□□□ -2.02
ATRX-212ENST00000623706 SMCR5Q8TEV8 140 aa2.4□□□□□ -2.02
ATRX-212ENST00000623706 TRPM6Q9BX84 2022 aa2.4□□□□□ -2.03
ATRX-212ENST00000623706 UTRNP46939 3433 aa2.4□□□□□ -2.03
ATRX-212ENST00000623706 CDC42BPGQ6DT37 1551 aa2.4□□□□□ -2.03
ATRX-212ENST00000623706 CDC42SE2Q9NRR3 84 aa2.4□□□□□ -2.03
ATRX-212ENST00000623706 PRRC2AP48634 2157 aaKnown RBP2.4□□□□□ -2.03
ATRX-212ENST00000623706 BBC3Q96PG8 261 aaPredicted RBP2.4□□□□□ -2.03
ATRX-212ENST00000623706 PTPRQQ9UMZ3 2332 aa2.4□□□□□ -2.03
ATRX-212ENST00000623706 ODF3L2Q3SX64 289 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 DLG5Q8TDM6 1919 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 PARP4Q9UKK3 1724 aaKnown RBP2.39□□□□□ -2.03
ATRX-212ENST00000623706 TRBV7-4A0A0J9YYF1 115 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 I3L2K1 104 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 Q8N9P0 234 aaPredicted RBP2.39□□□□□ -2.03
ATRX-212ENST00000623706 PLCE1Q9P212 2302 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 NWD2Q9ULI1 1742 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 DEFB132Q7Z7B7 95 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 KIF13BQ9NQT8 1826 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 DUOX1Q9NRD9 1551 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 MCM3APO60318 1980 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 PKD1L3Q7Z443 1732 aa2.39□□□□□ -2.03
ATRX-212ENST00000623706 OTOGLQ3ZCN5 2332 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 MYH4Q9Y623 1939 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 NFAT5O94916 1531 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 TDRD15B5MCY1 1934 aaKnown RBP2.38□□□□□ -2.03
ATRX-212ENST00000623706 C16orf90A8MZG2 172 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 GBF1Q92538 1859 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 Q6ZRX8 168 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 TRIOBPQ9H2D6 2365 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 PRR14LQ5THK1 2151 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 A0A1B0GU33 70 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 BCE1O60756 84 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 ZFP36P26651 326 aaKnown RBP2.38□□□□□ -2.03
ATRX-212ENST00000623706 DSCR10P59022 87 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 PLXNB1O43157 2135 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 LY75O60449 1722 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 DOCK2Q92608 1830 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 TRIP12Q14669 1992 aaPredicted RBP2.38□□□□□ -2.03
ATRX-212ENST00000623706 IGHV3OR16-9A0A0B4J2B5 98 aa2.38□□□□□ -2.03
ATRX-212ENST00000623706 LRRC37A3O60309 1634 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 EML5Q05BV3 1969 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 KRTAP24-1Q3LI83 254 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 Q8IZM0 81 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 COL5A3P25940 1745 aaPredicted RBP2.37□□□□□ -2.03
ATRX-212ENST00000623706 UBR2Q8IWV8 1755 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 ITSN1Q15811 1721 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 MAP2P11137 1827 aaKnown RBP2.37□□□□□ -2.03
ATRX-212ENST00000623706 MGAMO43451 1857 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 FREM3P0C091 2139 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 MYH1P12882 1939 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 KRTAP25-1Q3LHN0 102 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 MED12LQ86YW9 2145 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 PAPPA2Q9BXP8 1791 aa2.37□□□□□ -2.03
ATRX-212ENST00000623706 BRCA1P38398 1863 aaKnown RBP2.37□□□□□ -2.03
ATRX-212ENST00000623706 FHL3Q13643 280 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 Q8N7P7 452 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 CCDC88AQ3V6T2 1871 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 NAV3Q8IVL0 2385 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 SPTBN5Q9NRC6 3674 aaKnown RBP2.36□□□□□ -2.03
ATRX-212ENST00000623706 P0C879 139 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 SLIT3O75094 1523 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 CASP8AP2Q9UKL3 1982 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 DOCK1Q14185 1865 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 M0QY20 66 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 P0C880 135 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 E7EUB6 86 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 IGLV1-47P01700 117 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 FLVCR1-AS1Q8TAF5 88 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 DLEC1Q9Y238 1755 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 CACNA1BQ00975 2339 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 CNOT1A5YKK6 2376 aaKnown RBP2.36□□□□□ -2.03
ATRX-212ENST00000623706 MAP1BP46821 2468 aaKnown RBP2.36□□□□□ -2.03
ATRX-212ENST00000623706 UBR4Q5T4S7 5183 aa2.36□□□□□ -2.03
ATRX-212ENST00000623706 SHROOM3Q8TF72 1996 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 H7BZZ5 65 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 LINC00315P59091 139 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 SCN11AQ9UI33 1791 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 SHANK1Q9Y566 2161 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 GREB1Q4ZG55 1949 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 YLPM1P49750 1951 aaKnown RBP2.35□□□□□ -2.03
ATRX-212ENST00000623706 PHF3Q92576 2039 aaKnown RBP2.35□□□□□ -2.03
ATRX-212ENST00000623706 N4BP2Q86UW6 1770 aaPredicted RBP2.35□□□□□ -2.03
ATRX-212ENST00000623706 AGRNO00468 2067 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 KMT2EQ8IZD2 1858 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 M0R2T5 61 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 CACNA1EQ15878 2313 aa2.35□□□□□ -2.03
ATRX-212ENST00000623706 TP53BP1Q12888 1972 aaPredicted RBP2.35□□□□□ -2.03
ATRX-212ENST00000623706 EGFEM1PQ0D2K5 195 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms