RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SS18Q15532 418 aa5.39□□□□□ -1.55
TRIM49B-202ENST00000622138 C9orf129Q5T035 196 aaKnown RBP5.39□□□□□ -1.55
TRIM49B-202ENST00000622138 ENHOQ6UWT2 76 aa5.39□□□□□ -1.55
TRIM49B-202ENST00000622138 FAM104AQ969W3 186 aa5.39□□□□□ -1.55
TRIM49B-202ENST00000622138 IGLV5-39A0A0G2JS06 123 aa5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 A8MZ25 164 aa5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 JMJD7-PLA2G4BH0Y9G9 81 aa5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 RMI2Q96E14 147 aa5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 ZNF625Q96I27 306 aaPredicted RBP5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 UBL5Q9BZL1 73 aa5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 H3BUX3 64 aa5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 RHPN1-AS1Q9BWJ2 59 aa5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 Q9H8V8 135 aa5.38□□□□□ -1.55
TRIM49B-202ENST00000622138 SPG11Q96JI7 2443 aa5.37□□□□□ -1.55
TRIM49B-202ENST00000622138 CRYBG3Q68DQ2 2970 aa5.37□□□□□ -1.55
TRIM49B-202ENST00000622138 A0A087WYN8 130 aa5.37□□□□□ -1.55
TRIM49B-202ENST00000622138 A6NDX4 124 aa5.37□□□□□ -1.55
TRIM49B-202ENST00000622138 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
TRIM49B-202ENST00000622138 HOXD3P31249 432 aaPredicted RBP5.37□□□□□ -1.55
TRIM49B-202ENST00000622138 ORMDL1Q9P0S3 153 aa5.37□□□□□ -1.55
TRIM49B-202ENST00000622138 KLLNB2CW77 178 aa5.36□□□□□ -1.55
TRIM49B-202ENST00000622138 NCR3O14931 201 aa5.36□□□□□ -1.55
TRIM49B-202ENST00000622138 FAM74A4Q5TZK3 123 aa5.36□□□□□ -1.55
TRIM49B-202ENST00000622138 RETNQ9HD89 108 aa5.36□□□□□ -1.55
TRIM49B-202ENST00000622138 CFAP46Q8IYW2 2715 aa5.36□□□□□ -1.55
TRIM49B-202ENST00000622138 ESRGQ1W209 222 aa5.36□□□□□ -1.55
TRIM49B-202ENST00000622138 PIK3CD-AS1Q5SR53 167 aa5.36□□□□□ -1.55
TRIM49B-202ENST00000622138 SNURFQ9Y675 71 aa5.36□□□□□ -1.55
TRIM49B-202ENST00000622138 TMEM89A2RUT3 159 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 ERC2-IT1O76042 136 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 GNLYP22749 145 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 C10orf99Q6UWK7 81 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 MIR7-3HGQ8N6C7 128 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 WFDC9Q8NEX5 89 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 USMG5Q96IX5 58 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 Q96MF0 132 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 CDKN2A-AS1Q9UH64 79 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 TRBV7-4A0A0J9YYF1 115 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 MIFP14174 115 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 LINC00167Q96N53 147 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 CSPG4Q6UVK1 2322 aa5.35□□□□□ -1.55
TRIM49B-202ENST00000622138 FLNCQ14315 2725 aa5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 PIEZO1Q92508 2521 aa5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 UTP20O75691 2785 aaKnown RBP5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 IGHV4-30-2A0A087WSY4 118 aa5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 H3BUA1 57 aa5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 LECT2O14960 151 aa5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.34□□□□□ -1.55
TRIM49B-202ENST00000622138 IGKV3-20P01619 116 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 FAM229BQ4G0N7 80 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 SMIM11BQ8TCY0 68 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 DYNLRB2Q8TF09 96 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 ZANQ9Y493 2812 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 IGHV3-16A0A0C4DH30 117 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 PAX4O43316 350 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 LINC00337Q8N6G1 96 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 C11orf68Q9H3H3 251 aaKnown RBP5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 PKD1L2Q7Z442 2459 aa5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 USP9XQ93008 2570 aaPredicted RBP5.33□□□□□ -1.56
TRIM49B-202ENST00000622138 RNASE13Q5GAN3 156 aaKnown RBP5.32□□□□□ -1.56
TRIM49B-202ENST00000622138 MRPL55Q7Z7F7 128 aaKnown RBP5.32□□□□□ -1.56
TRIM49B-202ENST00000622138 CSMD2Q7Z408 3487 aa5.32□□□□□ -1.56
TRIM49B-202ENST00000622138 SORL1Q92673 2214 aa5.32□□□□□ -1.56
TRIM49B-202ENST00000622138 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
TRIM49B-202ENST00000622138 CCL19Q99731 98 aa5.32□□□□□ -1.56
TRIM49B-202ENST00000622138 CHCHD7Q9BUK0 85 aa5.32□□□□□ -1.56
TRIM49B-202ENST00000622138 DOPEY2Q9Y3R5 2298 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 IGKV2-28A0A075B6P5 120 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 IGKV2D-28P01615 120 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 MSMBP08118 114 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 CXCL6P80162 114 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 K7EMT4 169 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 IGHV4-59P01825 116 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 DAD1P61803 113 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 SPINK13Q1W4C9 94 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 C11orf72Q8NBR9 251 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 SND1-IT1Q9HBX3 110 aa5.31□□□□□ -1.56
TRIM49B-202ENST00000622138 TRAV10A0A0B4J240 114 aa5.3□□□□□ -1.56
TRIM49B-202ENST00000622138 TMEM256-PLSCR3K7ERE1 68 aa5.3□□□□□ -1.56
TRIM49B-202ENST00000622138 DOPEY1Q5JWR5 2465 aa5.3□□□□□ -1.56
TRIM49B-202ENST00000622138 USP9YO00507 2555 aaPredicted RBP5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 LINC01547P58512 204 aaPredicted RBP5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 RPL36AP83881 106 aaKnown RBP5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 Q1T7F1 81 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 TMEM254Q8TBM7 123 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 RPL36ALQ969Q0 106 aaKnown RBP5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 POLQO75417 2590 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 IGHV1OR15-1A0A075B7D0 117 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 K7EQG2 157 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 PRYO14603 147 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 LY6G6DO95868 133 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 DEFB112Q30KQ8 113 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 KRTAP3-3Q9BYR6 98 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 KRTAP3-2Q9BYR7 98 aa5.29□□□□□ -1.56
TRIM49B-202ENST00000622138 CREBBPQ92793 2442 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms