RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 NDUFA1O15239 70 aa12.39□□□□□ -0.43
FAM3A-222ENST00000621967 RPL36AP83881 106 aaKnown RBP12.39□□□□□ -0.43
FAM3A-222ENST00000621967 DGAT2L7PQ6IED9 249 aa12.39□□□□□ -0.43
FAM3A-222ENST00000621967 RPL36ALQ969Q0 106 aaKnown RBP12.39□□□□□ -0.43
FAM3A-222ENST00000621967 WFDC10AQ9H1F0 79 aa12.39□□□□□ -0.43
FAM3A-222ENST00000621967 H7C2G1 150 aa12.39□□□□□ -0.43
FAM3A-222ENST00000621967 SMAGPQ0VAQ4 97 aa12.39□□□□□ -0.43
FAM3A-222ENST00000621967 DAZ2Q13117 558 aaKnown RBP12.39□□□□□ -0.43
FAM3A-222ENST00000621967 DAZ4Q86SG3 579 aaKnown RBP12.39□□□□□ -0.43
FAM3A-222ENST00000621967 TMEM101Q96IK0 257 aa12.39□□□□□ -0.43
FAM3A-222ENST00000621967 DAZ3Q9NR90 486 aaKnown RBP12.39□□□□□ -0.43
FAM3A-222ENST00000621967 IGLV5-39A0A0G2JS06 123 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 SLC25A20O43772 301 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 PRSS2P07478 247 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 GIG44P09565 113 aaPredicted RBP12.38□□□□□ -0.43
FAM3A-222ENST00000621967 LINC00694P0DN24 101 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 HERVK_113P63121 156 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 COX6A2Q02221 97 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 ANKRD29Q8N6D5 301 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 LINC01600Q96MT4 127 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 CDIP1Q9H305 208 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 C19orf73Q9NVV2 129 aa12.38□□□□□ -0.43
FAM3A-222ENST00000621967 DNAH3Q8TD57 4116 aa12.37□□□□□ -0.43
FAM3A-222ENST00000621967 Q1RN00 199 aa12.37□□□□□ -0.43
FAM3A-222ENST00000621967 LINC00242Q5T6M2 205 aa12.37□□□□□ -0.43
FAM3A-222ENST00000621967 NTM-AS1Q6ZSK4 140 aa12.37□□□□□ -0.43
FAM3A-222ENST00000621967 C9JAW5 83 aa12.37□□□□□ -0.43
FAM3A-222ENST00000621967 TRIAP1O43715 76 aa12.37□□□□□ -0.43
FAM3A-222ENST00000621967 IFITM1P13164 125 aa12.37□□□□□ -0.43
FAM3A-222ENST00000621967 ATXN8Q156A1 80 aa12.37□□□□□ -0.43
FAM3A-222ENST00000621967 KPRPQ5T749 579 aaPredicted RBP12.37□□□□□ -0.43
FAM3A-222ENST00000621967 PLAC8L1A1L4L8 177 aa12.35□□□□□ -0.43
FAM3A-222ENST00000621967 LINC01620Q4KN68 170 aa12.34□□□□□ -0.43
FAM3A-222ENST00000621967 ICOSQ9Y6W8 199 aa12.34□□□□□ -0.43
FAM3A-222ENST00000621967 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
FAM3A-222ENST00000621967 C16orf74Q96GX8 76 aa12.33□□□□□ -0.44
FAM3A-222ENST00000621967 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
FAM3A-222ENST00000621967 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
FAM3A-222ENST00000621967 CDC42SE2Q9NRR3 84 aa12.33□□□□□ -0.44
FAM3A-222ENST00000621967 GAGE12JA6NER3 117 aa12.31□□□□□ -0.44
FAM3A-222ENST00000621967 NPC2P61916 151 aa12.31□□□□□ -0.44
FAM3A-222ENST00000621967 GAGE4Q13068 117 aa12.31□□□□□ -0.44
FAM3A-222ENST00000621967 GAGE5Q13069 117 aa12.31□□□□□ -0.44
FAM3A-222ENST00000621967 CIDEAO60543 219 aa12.31□□□□□ -0.44
FAM3A-222ENST00000621967 IGHV4-30-4P0DP06 118 aa12.31□□□□□ -0.44
FAM3A-222ENST00000621967 RPL35AP18077 110 aaKnown RBP12.31□□□□□ -0.44
FAM3A-222ENST00000621967 Q9H8V8 135 aa12.31□□□□□ -0.44
FAM3A-222ENST00000621967 F5H768 121 aa12.3□□□□□ -0.44
FAM3A-222ENST00000621967 CIRBPQ14011 172 aaKnown RBP12.3□□□□□ -0.44
FAM3A-222ENST00000621967 CSNK1G2-AS1Q8NCQ2 148 aa12.3□□□□□ -0.44
FAM3A-222ENST00000621967 OVOL2Q9BRP0 275 aa12.3□□□□□ -0.44
FAM3A-222ENST00000621967 TRBV10-2A0A0K0K1G8 114 aa12.29□□□□□ -0.44
FAM3A-222ENST00000621967 DAND5Q8N907 189 aa12.29□□□□□ -0.44
FAM3A-222ENST00000621967 ZNF625Q96I27 306 aaPredicted RBP12.29□□□□□ -0.44
FAM3A-222ENST00000621967 TRAV13-1A0A0B4J241 112 aa12.28□□□□□ -0.44
FAM3A-222ENST00000621967 TRBV6-4A0A1B0GX49 114 aa12.28□□□□□ -0.44
FAM3A-222ENST00000621967 COX6CP09669 75 aa12.28□□□□□ -0.44
FAM3A-222ENST00000621967 LINC00308Q8TCZ7 52 aa12.28□□□□□ -0.44
FAM3A-222ENST00000621967 TMEM243Q9BU79 118 aa12.28□□□□□ -0.44
FAM3A-222ENST00000621967 H7C423 109 aa12.27□□□□□ -0.44
FAM3A-222ENST00000621967 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.44
FAM3A-222ENST00000621967 K7EIL1 84 aa12.27□□□□□ -0.45
FAM3A-222ENST00000621967 GAGE7O76087 117 aa12.27□□□□□ -0.45
FAM3A-222ENST00000621967 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
FAM3A-222ENST00000621967 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
FAM3A-222ENST00000621967 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
FAM3A-222ENST00000621967 XGP55808 180 aa12.27□□□□□ -0.45
FAM3A-222ENST00000621967 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 TMEM262E9PQX1 116 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 APOC4P55056 127 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
FAM3A-222ENST00000621967 LST1O00453 97 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 UBE2L6O14933 153 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 MT-ATP8P03928 68 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 DEFB121Q5J5C9 76 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 COPS9Q8WXC6 57 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
FAM3A-222ENST00000621967 LOC100131303A0A0U1RQF7 123 aa12.24□□□□□ -0.45
FAM3A-222ENST00000621967 HERV-K104P63124 156 aa12.24□□□□□ -0.45
FAM3A-222ENST00000621967 H3BT86 120 aa12.23□□□□□ -0.45
FAM3A-222ENST00000621967 SOSTDC1Q6X4U4 206 aa12.23□□□□□ -0.45
FAM3A-222ENST00000621967 KIR2DL5BQ8NHK3 375 aa12.23□□□□□ -0.45
FAM3A-222ENST00000621967 CLEC2BQ92478 149 aa12.23□□□□□ -0.45
FAM3A-222ENST00000621967 MRAPQ8TCY5 172 aa12.22□□□□□ -0.45
FAM3A-222ENST00000621967 FHL2Q14192 279 aa12.21□□□□□ -0.45
FAM3A-222ENST00000621967 TRGV4A0A0C4DH28 118 aa12.21□□□□□ -0.46
FAM3A-222ENST00000621967 C2orf82Q6UX34 121 aa12.21□□□□□ -0.46
FAM3A-222ENST00000621967 UBE2WQ96B02 151 aa12.2□□□□□ -0.46
FAM3A-222ENST00000621967 TEX49A0A1B0GTD5 131 aa12.19□□□□□ -0.46
FAM3A-222ENST00000621967 MEIG1Q5JSS6 88 aa12.19□□□□□ -0.46
FAM3A-222ENST00000621967 TRBV6-8A0A0A6YYG3 113 aa12.18□□□□□ -0.46
FAM3A-222ENST00000621967 A0A0U1RRA0 63 aa12.18□□□□□ -0.46
FAM3A-222ENST00000621967 A0A1B0GV72 72 aa12.18□□□□□ -0.46
FAM3A-222ENST00000621967 DEFB135Q30KP9 77 aa12.17□□□□□ -0.46
FAM3A-222ENST00000621967 COX7A2LO14548 114 aa12.16□□□□□ -0.46
FAM3A-222ENST00000621967 GAGE6Q13070 117 aa12.16□□□□□ -0.46
FAM3A-222ENST00000621967 MEGF8Q7Z7M0 2845 aa12.16□□□□□ -0.46
FAM3A-222ENST00000621967 LINC00612Q8N6U2 182 aa12.16□□□□□ -0.46
FAM3A-222ENST00000621967 IGLV4-60A0A075B6I1 120 aa12.15□□□□□ -0.46
FAM3A-222ENST00000621967 COX7B2Q8TF08 81 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms