RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 IGIPA6NJ69 53 aa7.71□□□□□ -1.18
COL8A1-208ENST00000621757 TEX43Q6ZNM6 134 aa7.71□□□□□ -1.18
COL8A1-208ENST00000621757 LINC00173Q6ZV60 143 aa7.71□□□□□ -1.18
COL8A1-208ENST00000621757 SLC7A5P1Q8MH63 180 aa7.71□□□□□ -1.18
COL8A1-208ENST00000621757 LINC00528Q8N1L1 170 aa7.71□□□□□ -1.18
COL8A1-208ENST00000621757 TRAPPC1Q9Y5R8 145 aa7.71□□□□□ -1.18
COL8A1-208ENST00000621757 IGHV3OR16-9A0A0B4J2B5 98 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 LINC01546A6NGU7 62 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 ZNF561-AS1K7EIQ3 104 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 CHTF8P0CG12 524 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 ZC2HC1BQ5TFG8 222 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 Q6ZN92 141 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 TOMM6Q96B49 74 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 CARD19Q96LW7 228 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 YPEL4Q96NS1 127 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 C2orf88Q9BSF0 95 aa7.7□□□□□ -1.18
COL8A1-208ENST00000621757 IGLV4-69A0A075B6H9 119 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 NPSP0C0P6 89 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 UBE2D1P51668 147 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 COX6A2Q02221 97 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 SPAG11BQ08648 103 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 CIRBPQ14011 172 aaKnown RBP7.69□□□□□ -1.18
COL8A1-208ENST00000621757 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 CBLN2Q8IUK8 224 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 AMELXQ99217 191 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
COL8A1-208ENST00000621757 APOMO95445 188 aa7.68□□□□□ -1.18
COL8A1-208ENST00000621757 G0S2P27469 103 aa7.68□□□□□ -1.18
COL8A1-208ENST00000621757 SYCNQ0VAF6 134 aa7.68□□□□□ -1.18
COL8A1-208ENST00000621757 FA2HQ7L5A8 372 aa7.68□□□□□ -1.18
COL8A1-208ENST00000621757 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
COL8A1-208ENST00000621757 VCX2Q9H322 139 aa7.68□□□□□ -1.18
COL8A1-208ENST00000621757 SMCO4Q9NRQ5 59 aa7.68□□□□□ -1.18
COL8A1-208ENST00000621757 Q6ZRU5 148 aa7.67□□□□□ -1.18
COL8A1-208ENST00000621757 OR10D4PQ8NGN7 298 aa7.67□□□□□ -1.18
COL8A1-208ENST00000621757 C18orf32Q8TCD1 76 aa7.67□□□□□ -1.18
COL8A1-208ENST00000621757 ORAOV1Q8WV07 137 aa7.67□□□□□ -1.18
COL8A1-208ENST00000621757 CAMK2N2Q96S95 79 aa7.67□□□□□ -1.18
COL8A1-208ENST00000621757 A0A087WZ39 114 aa7.66□□□□□ -1.18
COL8A1-208ENST00000621757 IGKV2-24A0A0C4DH68 120 aa7.66□□□□□ -1.18
COL8A1-208ENST00000621757 INAFM2P0DMQ5 153 aa7.66□□□□□ -1.18
COL8A1-208ENST00000621757 PAPPA-AS1Q5QFB9 102 aa7.66□□□□□ -1.18
COL8A1-208ENST00000621757 ERASQ7Z444 233 aa7.66□□□□□ -1.18
COL8A1-208ENST00000621757 URB1-AS1Q96HZ7 61 aa7.66□□□□□ -1.18
COL8A1-208ENST00000621757 SCGB3A1Q96QR1 104 aa7.66□□□□□ -1.18
COL8A1-208ENST00000621757 A0A096LNI7 61 aa7.65□□□□□ -1.18
COL8A1-208ENST00000621757 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
COL8A1-208ENST00000621757 C2orf48Q96LS8 159 aa7.65□□□□□ -1.18
COL8A1-208ENST00000621757 SRRM2Q9UQ35 2752 aaKnown RBP7.64□□□□□ -1.19
COL8A1-208ENST00000621757 A0A087WYN8 130 aa7.64□□□□□ -1.19
COL8A1-208ENST00000621757 A0A096LNJ9 63 aa7.64□□□□□ -1.19
COL8A1-208ENST00000621757 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
COL8A1-208ENST00000621757 MAJINQ3KP22 176 aa7.64□□□□□ -1.19
COL8A1-208ENST00000621757 FAM19A3Q7Z5A8 133 aa7.64□□□□□ -1.19
COL8A1-208ENST00000621757 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
COL8A1-208ENST00000621757 DPH3Q96FX2 82 aa7.63□□□□□ -1.19
COL8A1-208ENST00000621757 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
COL8A1-208ENST00000621757 LINC00614P0C842 121 aa7.62□□□□□ -1.19
COL8A1-208ENST00000621757 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
COL8A1-208ENST00000621757 HERVK_113P63121 156 aa7.62□□□□□ -1.19
COL8A1-208ENST00000621757 PMCHL1Q16048 86 aa7.62□□□□□ -1.19
COL8A1-208ENST00000621757 PLAC8Q9NZF1 115 aa7.62□□□□□ -1.19
COL8A1-208ENST00000621757 A0A0J9YXV3 536 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.61□□□□□ -1.19
COL8A1-208ENST00000621757 NDUFA1O15239 70 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 HBDP02042 147 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 PTTG1IPP53801 180 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 RPL37AP61513 92 aaKnown RBP7.61□□□□□ -1.19
COL8A1-208ENST00000621757 SEC11AP67812 179 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 KIAA0087Q14695 138 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 C10orf25Q5T742 122 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 LINC01561Q8N1V8 128 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 STPG4Q8N801 248 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 GEMIN7Q9H840 131 aaKnown RBP7.61□□□□□ -1.19
COL8A1-208ENST00000621757 MRPL35Q9NZE8 188 aaKnown RBP7.61□□□□□ -1.19
COL8A1-208ENST00000621757 LINC00474Q9P2X8 69 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 CDKN2A-AS1Q9UH64 79 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 MYCBP2O75592 4640 aa7.61□□□□□ -1.19
COL8A1-208ENST00000621757 FLG2Q5D862 2391 aaPredicted RBP7.6□□□□□ -1.19
COL8A1-208ENST00000621757 F8WDY8 70 aa7.6□□□□□ -1.19
COL8A1-208ENST00000621757 RAB5BP61020 215 aa7.6□□□□□ -1.19
COL8A1-208ENST00000621757 RPL18AQ02543 176 aaKnown RBP7.6□□□□□ -1.19
COL8A1-208ENST00000621757 GAGE2BQ13066 116 aa7.6□□□□□ -1.19
COL8A1-208ENST00000621757 RNF151Q2KHN1 245 aa7.6□□□□□ -1.19
COL8A1-208ENST00000621757 UNQ6190/PRO20217Q6UXQ8 127 aa7.6□□□□□ -1.19
COL8A1-208ENST00000621757 CST9LQ9H4G1 147 aa7.6□□□□□ -1.19
COL8A1-208ENST00000621757 TINCRA0A1B0GVN0 87 aa7.59□□□□□ -1.19
COL8A1-208ENST00000621757 PMVKQ15126 192 aa7.59□□□□□ -1.19
COL8A1-208ENST00000621757 C2orf82Q6UX34 121 aa7.59□□□□□ -1.19
COL8A1-208ENST00000621757 LINC00469Q8N7U9 141 aa7.59□□□□□ -1.19
COL8A1-208ENST00000621757 PACRGQ96M98 296 aaPredicted RBP7.59□□□□□ -1.19
COL8A1-208ENST00000621757 C6orf48Q9UBA6 75 aa7.59□□□□□ -1.19
COL8A1-208ENST00000621757 ATP6V1G1O75348 118 aa7.58□□□□□ -1.2
COL8A1-208ENST00000621757 TRGC2P03986 189 aa7.58□□□□□ -1.2
COL8A1-208ENST00000621757 PDZD11Q5EBL8 140 aa7.58□□□□□ -1.2
COL8A1-208ENST00000621757 TOMM7Q9P0U1 55 aa7.58□□□□□ -1.2
COL8A1-208ENST00000621757 IGLV5-45A0A087WSX0 123 aa7.57□□□□□ -1.2
COL8A1-208ENST00000621757 SMIM1B2RUZ4 78 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms