RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 HERVK_113P61574 105 aa7.32□□□□□ -1.24
VPS11-208ENST00000621676 ZFAND6Q6FIF0 208 aa7.32□□□□□ -1.24
VPS11-208ENST00000621676 LOC107984156A0A0G2JMH3 177 aa7.32□□□□□ -1.24
VPS11-208ENST00000621676 ARL17AQ8IVW1 177 aa7.32□□□□□ -1.24
VPS11-208ENST00000621676 Q9H8V8 135 aa7.32□□□□□ -1.24
VPS11-208ENST00000621676 TRBV6-4A0A1B0GX49 114 aa7.31□□□□□ -1.24
VPS11-208ENST00000621676 C9orf116Q5BN46 136 aaPredicted RBP7.31□□□□□ -1.24
VPS11-208ENST00000621676 LINC00242Q5T6M2 205 aa7.31□□□□□ -1.24
VPS11-208ENST00000621676 BOD1L2Q8IYS8 172 aa7.31□□□□□ -1.24
VPS11-208ENST00000621676 MYMXA0A1B0GTQ4 84 aa7.31□□□□□ -1.24
VPS11-208ENST00000621676 NDUFA12Q9UI09 145 aa7.31□□□□□ -1.24
VPS11-208ENST00000621676 FBN3Q75N90 2809 aa7.31□□□□□ -1.24
VPS11-208ENST00000621676 A0A1B0GV72 72 aa7.3□□□□□ -1.24
VPS11-208ENST00000621676 TIMM17AQ99595 171 aa7.3□□□□□ -1.24
VPS11-208ENST00000621676 Q1RN00 199 aa7.3□□□□□ -1.24
VPS11-208ENST00000621676 HIGD2BQ4VC39 106 aa7.3□□□□□ -1.24
VPS11-208ENST00000621676 IL17DQ8TAD2 202 aa7.3□□□□□ -1.24
VPS11-208ENST00000621676 MIFP14174 115 aa7.3□□□□□ -1.24
VPS11-208ENST00000621676 CDC42SE2Q9NRR3 84 aa7.3□□□□□ -1.24
VPS11-208ENST00000621676 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
VPS11-208ENST00000621676 FUSP35637 526 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS11-208ENST00000621676 KIR2DL5BQ8NHK3 375 aa7.29□□□□□ -1.24
VPS11-208ENST00000621676 M0R2N4 97 aa7.29□□□□□ -1.24
VPS11-208ENST00000621676 PIK3CD-AS1Q5SR53 167 aa7.28□□□□□ -1.24
VPS11-208ENST00000621676 ADAMTSL4-AS1Q5T5F5 129 aa7.28□□□□□ -1.24
VPS11-208ENST00000621676 C6orf223Q8N319 242 aa7.28□□□□□ -1.24
VPS11-208ENST00000621676 TRBV10-1A0A0K0K1A3 114 aa7.28□□□□□ -1.24
VPS11-208ENST00000621676 C6orf226Q5I0X4 101 aa7.28□□□□□ -1.24
VPS11-208ENST00000621676 C10orf126Q8N4M7 172 aa7.28□□□□□ -1.24
VPS11-208ENST00000621676 MALP21145 153 aa7.27□□□□□ -1.24
VPS11-208ENST00000621676 VPS25Q9BRG1 176 aa7.27□□□□□ -1.24
VPS11-208ENST00000621676 GTSF1LQ9H1H1 148 aa7.27□□□□□ -1.24
VPS11-208ENST00000621676 LINC00158P58513 81 aa7.27□□□□□ -1.25
VPS11-208ENST00000621676 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
VPS11-208ENST00000621676 TRAV12-1A0A0B4J245 112 aa7.27□□□□□ -1.25
VPS11-208ENST00000621676 LYRM9A8MSI8 78 aa7.27□□□□□ -1.25
VPS11-208ENST00000621676 E9PLD3 99 aa7.27□□□□□ -1.25
VPS11-208ENST00000621676 PRR3P79522 188 aaKnown RBP7.27□□□□□ -1.25
VPS11-208ENST00000621676 ESRGQ1W209 222 aa7.27□□□□□ -1.25
VPS11-208ENST00000621676 PAPPA-AS1Q5QFB9 102 aa7.27□□□□□ -1.25
VPS11-208ENST00000621676 NFE4Q86UQ8 179 aa7.27□□□□□ -1.25
VPS11-208ENST00000621676 IGKV2D-24A0A075B6R9 120 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 UBE2D1P51668 147 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 MUSTN1Q8IVN3 82 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 OCIAD2Q56VL3 154 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 SAMD5Q5TGI4 173 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 ICOSQ9Y6W8 199 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 SMIM13P0DJ93 91 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 SCGB1C2P0DMR2 95 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 REG3AQ06141 175 aa7.26□□□□□ -1.25
VPS11-208ENST00000621676 SMIM9A6NGZ8 99 aa7.25□□□□□ -1.25
VPS11-208ENST00000621676 SPANXA1Q9NS26 97 aa7.25□□□□□ -1.25
VPS11-208ENST00000621676 A4D1N5 150 aa7.24□□□□□ -1.25
VPS11-208ENST00000621676 LINC01546A6NGU7 62 aa7.24□□□□□ -1.25
VPS11-208ENST00000621676 PSMB2P49721 201 aa7.24□□□□□ -1.25
VPS11-208ENST00000621676 LYPD5Q6UWN5 251 aa7.24□□□□□ -1.25
VPS11-208ENST00000621676 LINC00959A0A1B0GUT2 108 aa7.24□□□□□ -1.25
VPS11-208ENST00000621676 AMELXQ99217 191 aa7.24□□□□□ -1.25
VPS11-208ENST00000621676 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
VPS11-208ENST00000621676 CRPP02741 224 aa7.23□□□□□ -1.25
VPS11-208ENST00000621676 LINC01620Q4KN68 170 aa7.23□□□□□ -1.25
VPS11-208ENST00000621676 CHCHD10Q8WYQ3 142 aaPredicted RBP7.23□□□□□ -1.25
VPS11-208ENST00000621676 CMYA5Q8N3K9 4069 aa7.23□□□□□ -1.25
VPS11-208ENST00000621676 HSD52Q0P140 79 aa7.23□□□□□ -1.25
VPS11-208ENST00000621676 CEND1Q8N111 149 aa7.23□□□□□ -1.25
VPS11-208ENST00000621676 OR13C6PQ8NH95 151 aa7.23□□□□□ -1.25
VPS11-208ENST00000621676 A0A0J9YXY3 114 aa7.22□□□□□ -1.25
VPS11-208ENST00000621676 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
VPS11-208ENST00000621676 A6NDN8 102 aa7.22□□□□□ -1.25
VPS11-208ENST00000621676 EGFEM1PQ0D2K5 195 aa7.22□□□□□ -1.25
VPS11-208ENST00000621676 IGHV1-58A0A0C4DH39 117 aa7.22□□□□□ -1.25
VPS11-208ENST00000621676 H3BRM9 83 aa7.22□□□□□ -1.25
VPS11-208ENST00000621676 MRPS36P82909 103 aaKnown RBP7.22□□□□□ -1.25
VPS11-208ENST00000621676 XAGE1AQ9HD64 81 aa7.22□□□□□ -1.25
VPS11-208ENST00000621676 SMIM1B2RUZ4 78 aa7.21□□□□□ -1.25
VPS11-208ENST00000621676 SS18Q15532 418 aa7.21□□□□□ -1.25
VPS11-208ENST00000621676 H3BMG7 143 aa7.21□□□□□ -1.26
VPS11-208ENST00000621676 RPL32P62910 135 aaKnown RBP7.21□□□□□ -1.26
VPS11-208ENST00000621676 SPATA25Q9BR10 227 aa7.21□□□□□ -1.26
VPS11-208ENST00000621676 PRKDCP78527 4128 aaKnown RBP7.2□□□□□ -1.26
VPS11-208ENST00000621676 GAGE10A6NGK3 116 aa7.2□□□□□ -1.26
VPS11-208ENST00000621676 CKS1BP61024 79 aa7.2□□□□□ -1.26
VPS11-208ENST00000621676 HERVK_113P63121 156 aa7.2□□□□□ -1.26
VPS11-208ENST00000621676 UBE2DNLQ8IWF7 75 aa7.2□□□□□ -1.26
VPS11-208ENST00000621676 MIR7-3HGQ8N6C7 128 aa7.2□□□□□ -1.26
VPS11-208ENST00000621676 PYGO1Q9Y3Y4 419 aa7.2□□□□□ -1.26
VPS11-208ENST00000621676 LEPROTO15243 131 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 GAGE2EQ4V326 116 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 CASC10Q5T4H9 136 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 GAGE2DQ9UEU5 116 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 TINCRA0A1B0GVN0 87 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 C10orf25Q5T742 122 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 UNQ6190/PRO20217Q6UXQ8 127 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.19□□□□□ -1.26
VPS11-208ENST00000621676 K7ERU9 68 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 SPCS1Q9Y6A9 102 aa7.19□□□□□ -1.26
VPS11-208ENST00000621676 SRRM2Q9UQ35 2752 aaKnown RBP7.18□□□□□ -1.26
VPS11-208ENST00000621676 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms