RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 C5orf38Q86SI9 138 aa13.66□□□□□ -0.22
SRRT-218ENST00000620394 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.65□□□□□ -0.22
SRRT-218ENST00000620394 SPINK6Q6UWN8 80 aa13.65□□□□□ -0.22
SRRT-218ENST00000620394 Q6ZRP5 223 aa13.65□□□□□ -0.22
SRRT-218ENST00000620394 OR10D4PQ8NGN7 298 aa13.65□□□□□ -0.22
SRRT-218ENST00000620394 IGHV3OR16-9A0A0B4J2B5 98 aa13.64□□□□□ -0.23
SRRT-218ENST00000620394 SPAG11BQ08648 103 aa13.64□□□□□ -0.23
SRRT-218ENST00000620394 GAGE2BQ13066 116 aa13.64□□□□□ -0.23
SRRT-218ENST00000620394 REG3GQ6UW15 175 aa13.64□□□□□ -0.23
SRRT-218ENST00000620394 ATP5L2Q7Z4Y8 100 aa13.64□□□□□ -0.23
SRRT-218ENST00000620394 SRSF9Q13242 221 aaKnown RBP eCLIP13.63□□□□□ -0.23
SRRT-218ENST00000620394 RNF151Q2KHN1 245 aa13.63□□□□□ -0.23
SRRT-218ENST00000620394 A0A1W2PNN7 141 aa13.61□□□□□ -0.23
SRRT-218ENST00000620394 F8WDY8 70 aa13.61□□□□□ -0.23
SRRT-218ENST00000620394 ORMDL3Q8N138 153 aa13.61□□□□□ -0.23
SRRT-218ENST00000620394 KRTAP10-8P60410 259 aa13.6□□□□□ -0.23
SRRT-218ENST00000620394 OPRPNQ99935 248 aaPredicted RBP13.6□□□□□ -0.23
SRRT-218ENST00000620394 MRPL35Q9NZE8 188 aaKnown RBP13.6□□□□□ -0.23
SRRT-218ENST00000620394 ORAOV1Q8WV07 137 aa13.59□□□□□ -0.23
SRRT-218ENST00000620394 IFITM10A6NMD0 228 aa13.58□□□□□ -0.24
SRRT-218ENST00000620394 RPL18AQ02543 176 aaKnown RBP13.58□□□□□ -0.24
SRRT-218ENST00000620394 C9orf116Q5BN46 136 aaPredicted RBP13.58□□□□□ -0.24
SRRT-218ENST00000620394 PRELID3AQ96N28 172 aa13.57□□□□□ -0.24
SRRT-218ENST00000620394 PYGO1Q9Y3Y4 419 aa13.57□□□□□ -0.24
SRRT-218ENST00000620394 PRSS47A8MTI9 375 aa13.56□□□□□ -0.24
SRRT-218ENST00000620394 TMEM136Q6ZRR5 245 aa13.56□□□□□ -0.24
SRRT-218ENST00000620394 NDUFA1O15239 70 aa13.55□□□□□ -0.24
SRRT-218ENST00000620394 IFI27P40305 119 aaPredicted RBP13.55□□□□□ -0.24
SRRT-218ENST00000620394 LAMTOR2Q9Y2Q5 125 aa13.55□□□□□ -0.24
SRRT-218ENST00000620394 TLX1NBP0CAT3 122 aa13.54□□□□□ -0.24
SRRT-218ENST00000620394 RAB5AP20339 215 aa13.54□□□□□ -0.24
SRRT-218ENST00000620394 PNRC1Q12796 327 aaPredicted RBP13.54□□□□□ -0.24
SRRT-218ENST00000620394 PSORS1C2Q9UIG4 136 aa13.54□□□□□ -0.24
SRRT-218ENST00000620394 IGLV4-3A0A075B6K6 122 aa13.53□□□□□ -0.24
SRRT-218ENST00000620394 TGIF2-C20orf24A0A0A6YYL0 155 aa13.53□□□□□ -0.24
SRRT-218ENST00000620394 IMMP2LQ96T52 175 aa13.53□□□□□ -0.24
SRRT-218ENST00000620394 A0A087WZ39 114 aa13.52□□□□□ -0.25
SRRT-218ENST00000620394 C10orf25Q5T742 122 aa13.52□□□□□ -0.25
SRRT-218ENST00000620394 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
SRRT-218ENST00000620394 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
SRRT-218ENST00000620394 C6orf48Q9UBA6 75 aa13.51□□□□□ -0.25
SRRT-218ENST00000620394 KIAA0087Q14695 138 aa13.5□□□□□ -0.25
SRRT-218ENST00000620394 PHF5AQ7RTV0 110 aaKnown RBP13.5□□□□□ -0.25
SRRT-218ENST00000620394 ANAPC16Q96DE5 110 aa13.5□□□□□ -0.25
SRRT-218ENST00000620394 MT-ND6P03923 174 aa13.49□□□□□ -0.25
SRRT-218ENST00000620394 UNQ6190/PRO20217Q6UXQ8 127 aa13.49□□□□□ -0.25
SRRT-218ENST00000620394 MAP1LC3AQ9H492 121 aa13.49□□□□□ -0.25
SRRT-218ENST00000620394 MT-ND4LP03901 98 aa13.47□□□□□ -0.25
SRRT-218ENST00000620394 UBE2D1P51668 147 aa13.47□□□□□ -0.25
SRRT-218ENST00000620394 LINC01561Q8N1V8 128 aa13.47□□□□□ -0.25
SRRT-218ENST00000620394 Q8N8P6 123 aa13.47□□□□□ -0.25
SRRT-218ENST00000620394 TEX43Q6ZNM6 134 aa13.46□□□□□ -0.25
SRRT-218ENST00000620394 LINC00173Q6ZV60 143 aa13.46□□□□□ -0.25
SRRT-218ENST00000620394 CYSLTR1Q9Y271 337 aa13.46□□□□□ -0.25
SRRT-218ENST00000620394 TRBV30A0A0K0K1B3 111 aa13.45□□□□□ -0.26
SRRT-218ENST00000620394 LOC389332A0A1B0GUA5 103 aa13.45□□□□□ -0.26
SRRT-218ENST00000620394 FAM168BA1KXE4 195 aa13.45□□□□□ -0.26
SRRT-218ENST00000620394 NPSP0C0P6 89 aa13.45□□□□□ -0.26
SRRT-218ENST00000620394 C1orf137Q5JT78 98 aa13.45□□□□□ -0.26
SRRT-218ENST00000620394 C2orf66Q6UXQ4 117 aa13.45□□□□□ -0.26
SRRT-218ENST00000620394 AMELXQ99217 191 aa13.45□□□□□ -0.26
SRRT-218ENST00000620394 K7EMI3 77 aa13.44□□□□□ -0.26
SRRT-218ENST00000620394 C2orf88Q9BSF0 95 aa13.44□□□□□ -0.26
SRRT-218ENST00000620394 ORMDL2Q53FV1 153 aa13.43□□□□□ -0.26
SRRT-218ENST00000620394 FAM19A3Q7Z5A8 133 aa13.42□□□□□ -0.26
SRRT-218ENST00000620394 KRTAP7-1Q8IUC3 87 aa13.42□□□□□ -0.26
SRRT-218ENST00000620394 IGLV7-43P04211 117 aa13.41□□□□□ -0.26
SRRT-218ENST00000620394 C2orf82Q6UX34 121 aa13.41□□□□□ -0.26
SRRT-218ENST00000620394 Q6ZN92 141 aa13.41□□□□□ -0.26
SRRT-218ENST00000620394 KRTAP11-1Q8IUC1 163 aa13.41□□□□□ -0.26
SRRT-218ENST00000620394 IGIPA6NJ69 53 aa13.4□□□□□ -0.26
SRRT-218ENST00000620394 RAB14P61106 215 aa13.4□□□□□ -0.26
SRRT-218ENST00000620394 GAGE2EQ4V326 116 aa13.4□□□□□ -0.26
SRRT-218ENST00000620394 FAM19A5Q7Z5A7 132 aaPredicted RBP13.4□□□□□ -0.26
SRRT-218ENST00000620394 GAGE2DQ9UEU5 116 aa13.4□□□□□ -0.26
SRRT-218ENST00000620394 LPAP08519 4548 aa13.4□□□□□ -0.26
SRRT-218ENST00000620394 NDUFC2-KCTD14E9PQ53 114 aa13.39□□□□□ -0.27
SRRT-218ENST00000620394 ZC2HC1BQ5TFG8 222 aa13.39□□□□□ -0.27
SRRT-218ENST00000620394 NXT2Q9NPJ8 142 aaKnown RBP13.39□□□□□ -0.27
SRRT-218ENST00000620394 DIRC1Q969H9 104 aa13.38□□□□□ -0.27
SRRT-218ENST00000620394 VCX2Q9H322 139 aa13.38□□□□□ -0.27
SRRT-218ENST00000620394 M0QXV9 152 aa13.37□□□□□ -0.27
SRRT-218ENST00000620394 PACRGQ96M98 296 aaPredicted RBP13.37□□□□□ -0.27
SRRT-218ENST00000620394 CLLU1Q5K131 121 aa13.36□□□□□ -0.27
SRRT-218ENST00000620394 C9orf129Q5T035 196 aaKnown RBP13.36□□□□□ -0.27
SRRT-218ENST00000620394 CTDSP1Q9GZU7 261 aa13.36□□□□□ -0.27
SRRT-218ENST00000620394 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
SRRT-218ENST00000620394 H0Y9J4 135 aa13.34□□□□□ -0.27
SRRT-218ENST00000620394 Q8IZM0 81 aa13.34□□□□□ -0.27
SRRT-218ENST00000620394 ADCYAP1P18509 176 aa13.33□□□□□ -0.28
SRRT-218ENST00000620394 PAPPA-AS1Q5QFB9 102 aa13.33□□□□□ -0.28
SRRT-218ENST00000620394 PRSS2P07478 247 aa13.32□□□□□ -0.28
SRRT-218ENST00000620394 G0S2P27469 103 aa13.32□□□□□ -0.28
SRRT-218ENST00000620394 HERVK_113P63121 156 aa13.32□□□□□ -0.28
SRRT-218ENST00000620394 SEC11AP67812 179 aa13.32□□□□□ -0.28
SRRT-218ENST00000620394 TOMM6Q96B49 74 aa13.32□□□□□ -0.28
SRRT-218ENST00000620394 TRAV9-1A0A075B6T8 112 aa13.31□□□□□ -0.28
SRRT-218ENST00000620394 TOMM7Q9P0U1 55 aa13.3□□□□□ -0.28
SRRT-218ENST00000620394 CDKN2A-AS1Q9UH64 79 aa13.3□□□□□ -0.28
SRRT-218ENST00000620394 KRTAP1-4P0C5Y4 121 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms