RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	LINC00308	Q8TCZ7	52 aa		10.37	□□□□□ -0.75
SMTN-223	ENST00000619644	DNAJC30	Q96LL9	226 aa		10.37	□□□□□ -0.75
SMTN-223	ENST00000619644	USP24	Q9UPU5	2620 aa		10.37	□□□□□ -0.75
SMTN-223	ENST00000619644	UQCRQ	O14949	82 aa		10.37	□□□□□ -0.75
SMTN-223	ENST00000619644	RS1	O15537	224 aa		10.37	□□□□□ -0.75
SMTN-223	ENST00000619644	LINC00242	Q5T6M2	205 aa		10.37	□□□□□ -0.75
SMTN-223	ENST00000619644	WFDC10A	Q9H1F0	79 aa		10.37	□□□□□ -0.75
SMTN-223	ENST00000619644		Q8N2B8	174 aa		10.36	□□□□□ -0.75
SMTN-223	ENST00000619644	SETX	Q7Z333	2677 aa	Known RBP	10.36	□□□□□ -0.75
SMTN-223	ENST00000619644	HERVK_113	P63121	156 aa		10.36	□□□□□ -0.75
SMTN-223	ENST00000619644	C1orf158	Q8N1D5	194 aa		10.36	□□□□□ -0.75
SMTN-223	ENST00000619644	EDA2R	Q9HAV5	297 aa		10.35	□□□□□ -0.75
SMTN-223	ENST00000619644	KLK5	Q9Y337	293 aa	Predicted RBP	10.35	□□□□□ -0.75
SMTN-223	ENST00000619644	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.35	□□□□□ -0.75
SMTN-223	ENST00000619644	LOC107984640	A0A0U1RRK4	108 aa		10.35	□□□□□ -0.75
SMTN-223	ENST00000619644	LINC00526	Q96FQ7	95 aa		10.35	□□□□□ -0.75
SMTN-223	ENST00000619644	LOC100131303	A0A0U1RQF7	123 aa		10.34	□□□□□ -0.75
SMTN-223	ENST00000619644		K7EQD1	137 aa		10.34	□□□□□ -0.75
SMTN-223	ENST00000619644	PLA2G2A	P14555	144 aa		10.34	□□□□□ -0.75
SMTN-223	ENST00000619644	PIK3CD-AS1	Q5SR53	167 aa		10.34	□□□□□ -0.75
SMTN-223	ENST00000619644	RNF152	Q8N8N0	203 aa		10.34	□□□□□ -0.75
SMTN-223	ENST00000619644	CR1	P17927	2039 aa		10.34	□□□□□ -0.75
SMTN-223	ENST00000619644	APC	P25054	2843 aa		10.34	□□□□□ -0.75
SMTN-223	ENST00000619644	BAALC-AS2	P0C853	105 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	NBEAL2	Q6ZNJ1	2754 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	BEAN1	Q3B7T3	259 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	SOSTDC1	Q6X4U4	206 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	NTM-AS1	Q6ZSK4	140 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	CCL24	O00175	119 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	TIRAP	P58753	221 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	DEFB113	Q30KQ7	82 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	SDIM1	Q6ZPB5	146 aa		10.33	□□□□□ -0.76
SMTN-223	ENST00000619644	SMIM1	B2RUZ4	78 aa		10.32	□□□□□ -0.76
SMTN-223	ENST00000619644	ATP5G1	P05496	136 aa		10.32	□□□□□ -0.76
SMTN-223	ENST00000619644	C11orf68	Q9H3H3	251 aa	Known RBP	10.32	□□□□□ -0.76
SMTN-223	ENST00000619644	C22orf24	Q9Y442	160 aa		10.32	□□□□□ -0.76
SMTN-223	ENST00000619644	AKAP9	Q99996	3911 aa		10.32	□□□□□ -0.76
SMTN-223	ENST00000619644	FSHB	P01225	129 aa		10.31	□□□□□ -0.76
SMTN-223	ENST00000619644	CSDC2	Q9Y534	153 aa	Known RBP	10.31	□□□□□ -0.76
SMTN-223	ENST00000619644	TRAC	P01848	142 aa		10.31	□□□□□ -0.76
SMTN-223	ENST00000619644	C5orf38	Q86SI9	138 aa		10.31	□□□□□ -0.76
SMTN-223	ENST00000619644	FAM218A	Q96MZ4	157 aa		10.31	□□□□□ -0.76
SMTN-223	ENST00000619644	IGLV5-45	A0A087WSX0	123 aa		10.31	□□□□□ -0.76
SMTN-223	ENST00000619644	TRGV4	A0A0C4DH28	118 aa		10.31	□□□□□ -0.76
SMTN-223	ENST00000619644	GAGE2A	Q6NT46	116 aa		10.31	□□□□□ -0.76
SMTN-223	ENST00000619644		A8MTW9	85 aa		10.3	□□□□□ -0.76
SMTN-223	ENST00000619644	BBC3	Q96PG8	261 aa	Predicted RBP	10.3	□□□□□ -0.76
SMTN-223	ENST00000619644	GCN1	Q92616	2671 aa	Known RBP	10.3	□□□□□ -0.76
SMTN-223	ENST00000619644	COX7C	P15954	63 aa		10.3	□□□□□ -0.76
SMTN-223	ENST00000619644	CXCL5	P42830	114 aa		10.3	□□□□□ -0.76
SMTN-223	ENST00000619644	TMEM243	Q9BU79	118 aa		10.29	□□□□□ -0.76
SMTN-223	ENST00000619644	IGLV5-39	A0A0G2JS06	123 aa		10.29	□□□□□ -0.76
SMTN-223	ENST00000619644	DNAJC9-AS1	A6NH13	148 aa		10.29	□□□□□ -0.76
SMTN-223	ENST00000619644	LINC00158	P58513	81 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644	HIST2H2BC	Q6DN03	193 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644	C2orf48	Q96LS8	159 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644		Q9HAA7	133 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644	CDC42SE2	Q9NRR3	84 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644	NOTCH2	Q04721	2471 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644		J3KT08	172 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644	INAFM2	P0DMQ5	153 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644	WFDC11	Q8NEX6	87 aa		10.28	□□□□□ -0.76
SMTN-223	ENST00000619644	PFN2	P35080	140 aa		10.27	□□□□□ -0.77
SMTN-223	ENST00000619644	FAM222A	Q5U5X8	452 aa		10.27	□□□□□ -0.77
SMTN-223	ENST00000619644	COPS9	Q8WXC6	57 aa		10.27	□□□□□ -0.77
SMTN-223	ENST00000619644	HIVEP2	P31629	2446 aa		10.26	□□□□□ -0.77
SMTN-223	ENST00000619644	DEFB130B	P0DP73	79 aa		10.26	□□□□□ -0.77
SMTN-223	ENST00000619644	DEFB130A	P0DP74	79 aa		10.26	□□□□□ -0.77
SMTN-223	ENST00000619644	LRRC75A-AS1	Q8N1F1	130 aa		10.26	□□□□□ -0.77
SMTN-223	ENST00000619644	MIR7-3HG	Q8N6C7	128 aa		10.26	□□□□□ -0.77
SMTN-223	ENST00000619644	TRBV10-1	A0A0K0K1A3	114 aa		10.25	□□□□□ -0.77
SMTN-223	ENST00000619644	CRYGA	P11844	174 aa		10.25	□□□□□ -0.77
SMTN-223	ENST00000619644	MAL	P21145	153 aa		10.25	□□□□□ -0.77
SMTN-223	ENST00000619644	HIST1H4A	P62805	103 aa	Known RBP	10.25	□□□□□ -0.77
SMTN-223	ENST00000619644	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.25	□□□□□ -0.77
SMTN-223	ENST00000619644		A0A1B0GX51	115 aa		10.24	□□□□□ -0.77
SMTN-223	ENST00000619644	hADV29S1	A0JD25	119 aa		10.24	□□□□□ -0.77
SMTN-223	ENST00000619644	ATOX1	O00244	68 aa		10.24	□□□□□ -0.77
SMTN-223	ENST00000619644	OR13C6P	Q8NH95	151 aa		10.24	□□□□□ -0.77
SMTN-223	ENST00000619644		A0A096LPF7	62 aa		10.24	□□□□□ -0.77
SMTN-223	ENST00000619644	CRP	P02741	224 aa		10.24	□□□□□ -0.77
SMTN-223	ENST00000619644	CLPSL2	Q6UWE3	100 aa		10.24	□□□□□ -0.77
SMTN-223	ENST00000619644	ESM1	Q9NQ30	184 aa		10.24	□□□□□ -0.77
SMTN-223	ENST00000619644	NBPF19	A0A087WUL8	3843 aa		10.23	□□□□□ -0.77
SMTN-223	ENST00000619644	CYSTM1	Q9H1C7	97 aa		10.23	□□□□□ -0.77
SMTN-223	ENST00000619644	UBR5	O95071	2799 aa	Predicted RBP	10.23	□□□□□ -0.77
SMTN-223	ENST00000619644	IGLV4-60	A0A075B6I1	120 aa		10.22	□□□□□ -0.77
SMTN-223	ENST00000619644	COX7B2	Q8TF08	81 aa		10.22	□□□□□ -0.77
SMTN-223	ENST00000619644	SND1-IT1	Q9HBX3	110 aa		10.22	□□□□□ -0.77
SMTN-223	ENST00000619644	SMIM9	A6NGZ8	99 aa		10.22	□□□□□ -0.77
SMTN-223	ENST00000619644		F5H768	121 aa		10.22	□□□□□ -0.77
SMTN-223	ENST00000619644	DNAL4	O96015	105 aa		10.22	□□□□□ -0.77
SMTN-223	ENST00000619644	C5orf47	Q569G3	176 aa		10.22	□□□□□ -0.77
SMTN-223	ENST00000619644	TRAV25	A0A0B4J276	109 aa		10.21	□□□□□ -0.78
SMTN-223	ENST00000619644	C9orf129	Q5T035	196 aa	Known RBP	10.21	□□□□□ -0.78
SMTN-223	ENST00000619644	PAX4	O43316	350 aa		10.2	□□□□□ -0.78
SMTN-223	ENST00000619644	IGKV3D-7	A0A0C4DH55	119 aa		10.2	□□□□□ -0.78
SMTN-223	ENST00000619644	RPL18A	Q02543	176 aa	Known RBP	10.2	□□□□□ -0.78
SMTN-223	ENST00000619644	C14orf132	Q9NPU4	83 aa		10.2	□□□□□ -0.78
SMTN-223	ENST00000619644	C16orf74	Q96GX8	76 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms