RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 FAM236DA0A1B0GTK5 79 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 H3BUA1 57 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 FAM236CP0DP71 79 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 Q6YL49 198 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 C9orf139Q6ZV77 190 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 ZNF625Q96I27 306 aaPredicted RBP11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 F6UB75 175 aa11.52□□□□□ -0.57
SEMA3B-214ENST00000619119 U3KQE9 123 aa11.52□□□□□ -0.57
SEMA3B-214ENST00000619119 A0A0U1RQV1 116 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 PSMB8P28062 276 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 C20orf203Q8NBC4 194 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 SORL1Q92673 2214 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 TMEM86BQ8N661 226 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 LINC00846Q9NV44 126 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 FSHBP01225 129 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
SEMA3B-214ENST00000619119 HILS1P60008 231 aa11.5□□□□□ -0.57
SEMA3B-214ENST00000619119 MRPL53Q96EL3 112 aaKnown RBP11.5□□□□□ -0.57
SEMA3B-214ENST00000619119 C9orf85Q96MD7 179 aa11.5□□□□□ -0.57
SEMA3B-214ENST00000619119 BEAN1Q3B7T3 259 aa11.5□□□□□ -0.57
SEMA3B-214ENST00000619119 Q6JHZ5 121 aa11.5□□□□□ -0.57
SEMA3B-214ENST00000619119 PDZD2O15018 2839 aa11.5□□□□□ -0.57
SEMA3B-214ENST00000619119 C9orf129Q5T035 196 aaKnown RBP11.49□□□□□ -0.57
SEMA3B-214ENST00000619119 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
SEMA3B-214ENST00000619119 GHRHP01286 108 aa11.49□□□□□ -0.57
SEMA3B-214ENST00000619119 ZNF702PQ9H963 129 aa11.49□□□□□ -0.57
SEMA3B-214ENST00000619119 MED14OSP0DP75 135 aa11.48□□□□□ -0.57
SEMA3B-214ENST00000619119 TRAV23DV6A0A075B6W5 121 aa11.47□□□□□ -0.57
SEMA3B-214ENST00000619119 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
SEMA3B-214ENST00000619119 LINC00308Q8TCZ7 52 aa11.47□□□□□ -0.57
SEMA3B-214ENST00000619119 LENEPQ9Y5L5 61 aa11.47□□□□□ -0.57
SEMA3B-214ENST00000619119 V9GYY9 64 aa11.47□□□□□ -0.57
SEMA3B-214ENST00000619119 DEFB136Q30KP8 78 aa11.46□□□□□ -0.57
SEMA3B-214ENST00000619119 KHDC1LQ5JSQ8 128 aa11.46□□□□□ -0.57
SEMA3B-214ENST00000619119 NDUFC2O95298 119 aa11.46□□□□□ -0.58
SEMA3B-214ENST00000619119 C18orf65Q6ZTR6 163 aa11.46□□□□□ -0.58
SEMA3B-214ENST00000619119 FAM222AQ5U5X8 452 aa11.45□□□□□ -0.58
SEMA3B-214ENST00000619119 TRBV6-5A0A0K0K1A5 114 aa11.45□□□□□ -0.58
SEMA3B-214ENST00000619119 MRPS36P82909 103 aaKnown RBP11.45□□□□□ -0.58
SEMA3B-214ENST00000619119 WNK1Q9H4A3 2382 aa11.45□□□□□ -0.58
SEMA3B-214ENST00000619119 RBMY1BA6NDE4 496 aaKnown RBP11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 RBMY1EA6NEQ0 496 aaKnown RBP11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 RBMY1DP0C7P1 496 aaKnown RBP11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 RBMY1A1P0DJD3 496 aaKnown RBP11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 RBMY1CP0DJD4 496 aa11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 RBMY1FQ15415 496 aaKnown RBP11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 BRK1Q8WUW1 75 aa11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 TRAV12-2A0A075B6T6 113 aa11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 M0QY20 66 aa11.44□□□□□ -0.58
SEMA3B-214ENST00000619119 UBE2D4Q9Y2X8 147 aa11.43□□□□□ -0.58
SEMA3B-214ENST00000619119 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
SEMA3B-214ENST00000619119 SOSTDC1Q6X4U4 206 aa11.42□□□□□ -0.58
SEMA3B-214ENST00000619119 SERP1Q9Y6X1 66 aa11.42□□□□□ -0.58
SEMA3B-214ENST00000619119 AKAP9Q99996 3911 aa11.42□□□□□ -0.58
SEMA3B-214ENST00000619119 SOCS3O14543 225 aa11.42□□□□□ -0.58
SEMA3B-214ENST00000619119 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
SEMA3B-214ENST00000619119 C1orf195Q5TG92 126 aa11.42□□□□□ -0.58
SEMA3B-214ENST00000619119 NDUFC2-KCTD14E9PQ53 114 aa11.41□□□□□ -0.58
SEMA3B-214ENST00000619119 Q9H8V8 135 aa11.41□□□□□ -0.58
SEMA3B-214ENST00000619119 TIMM17BO60830 172 aa11.4□□□□□ -0.58
SEMA3B-214ENST00000619119 XCL1P47992 114 aa11.4□□□□□ -0.58
SEMA3B-214ENST00000619119 XCL2Q9UBD3 114 aa11.4□□□□□ -0.58
SEMA3B-214ENST00000619119 FAM104AQ969W3 186 aa11.4□□□□□ -0.59
SEMA3B-214ENST00000619119 IGKV3-20P01619 116 aa11.39□□□□□ -0.59
SEMA3B-214ENST00000619119 CDKN2A-AS1Q9UH64 79 aa11.39□□□□□ -0.59
SEMA3B-214ENST00000619119 SLURP1P55000 103 aa11.39□□□□□ -0.59
SEMA3B-214ENST00000619119 NCR3O14931 201 aa11.38□□□□□ -0.59
SEMA3B-214ENST00000619119 FP248Q71RG6 208 aaPredicted RBP11.38□□□□□ -0.59
SEMA3B-214ENST00000619119 FAM19A1Q7Z5A9 133 aa11.38□□□□□ -0.59
SEMA3B-214ENST00000619119 IGHV3-73A0A0B4J1V6 119 aa11.38□□□□□ -0.59
SEMA3B-214ENST00000619119 C16orf95Q9H693 158 aa11.38□□□□□ -0.59
SEMA3B-214ENST00000619119 DNAJC9-AS1A6NH13 148 aa11.37□□□□□ -0.59
SEMA3B-214ENST00000619119 UBE2E2Q96LR5 201 aa11.37□□□□□ -0.59
SEMA3B-214ENST00000619119 HIVEP2P31629 2446 aa11.37□□□□□ -0.59
SEMA3B-214ENST00000619119 K7EMT4 169 aa11.37□□□□□ -0.59
SEMA3B-214ENST00000619119 NDUFA1O15239 70 aa11.37□□□□□ -0.59
SEMA3B-214ENST00000619119 SMR3AQ99954 134 aa11.37□□□□□ -0.59
SEMA3B-214ENST00000619119 A0A087WYN8 130 aa11.36□□□□□ -0.59
SEMA3B-214ENST00000619119 PIK3CD-AS1Q5SR53 167 aa11.36□□□□□ -0.59
SEMA3B-214ENST00000619119 ESM1Q9NQ30 184 aa11.36□□□□□ -0.59
SEMA3B-214ENST00000619119 LINC00474Q9P2X8 69 aa11.36□□□□□ -0.59
SEMA3B-214ENST00000619119 TMEM89A2RUT3 159 aa11.36□□□□□ -0.59
SEMA3B-214ENST00000619119 KNCNA6PVL3 124 aa11.36□□□□□ -0.59
SEMA3B-214ENST00000619119 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.35□□□□□ -0.59
SEMA3B-214ENST00000619119 IGKV2-29A2NJV5 120 aaPredicted RBP11.35□□□□□ -0.59
SEMA3B-214ENST00000619119 H7BZZ5 65 aa11.34□□□□□ -0.59
SEMA3B-214ENST00000619119 KRTAP1-1Q07627 177 aa11.34□□□□□ -0.59
SEMA3B-214ENST00000619119 ENHOQ6UWT2 76 aa11.34□□□□□ -0.59
SEMA3B-214ENST00000619119 ANK3Q12955 4377 aaKnown RBP11.34□□□□□ -0.59
SEMA3B-214ENST00000619119 SMIM26A0A096LP01 95 aa11.34□□□□□ -0.59
SEMA3B-214ENST00000619119 EPM2AB3EWF7 344 aa11.34□□□□□ -0.59
SEMA3B-214ENST00000619119 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
SEMA3B-214ENST00000619119 SNURFQ9Y675 71 aa11.33□□□□□ -0.6
SEMA3B-214ENST00000619119 IL17DQ8TAD2 202 aa11.33□□□□□ -0.6
SEMA3B-214ENST00000619119 SLPIP03973 132 aa11.32□□□□□ -0.6
SEMA3B-214ENST00000619119 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
SEMA3B-214ENST00000619119 NOTCH3Q9UM47 2321 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms