RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 PRR9Q5T870 116 aa12.02□□□□□ -0.48
CNTNAP3B-214ENST00000618777 FNDC1Q4ZHG4 1894 aaPredicted RBP12.02□□□□□ -0.49
CNTNAP3B-214ENST00000618777 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
CNTNAP3B-214ENST00000618777 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
CNTNAP3B-214ENST00000618777 CDC42SE2Q9NRR3 84 aa12.01□□□□□ -0.49
CNTNAP3B-214ENST00000618777 SPINK6Q6UWN8 80 aa12.01□□□□□ -0.49
CNTNAP3B-214ENST00000618777 hDV103S1A0JD37 113 aa12.01□□□□□ -0.49
CNTNAP3B-214ENST00000618777 DEFB114Q30KQ6 69 aa12.01□□□□□ -0.49
CNTNAP3B-214ENST00000618777 OXLD1Q5BKU9 147 aa12□□□□□ -0.49
CNTNAP3B-214ENST00000618777 Q6ZVQ6 151 aa12□□□□□ -0.49
CNTNAP3B-214ENST00000618777 C1orf137Q5JT78 98 aa12□□□□□ -0.49
CNTNAP3B-214ENST00000618777 SMIM1B2RUZ4 78 aa11.99□□□□□ -0.49
CNTNAP3B-214ENST00000618777 LINC01547P58512 204 aaPredicted RBP11.99□□□□□ -0.49
CNTNAP3B-214ENST00000618777 ALPK3Q96L96 1907 aa11.99□□□□□ -0.49
CNTNAP3B-214ENST00000618777 PTPRQQ9UMZ3 2332 aa11.99□□□□□ -0.49
CNTNAP3B-214ENST00000618777 ADAMTSL4-AS1Q5T5F5 129 aa11.99□□□□□ -0.49
CNTNAP3B-214ENST00000618777 AGRNO00468 2067 aa11.99□□□□□ -0.49
CNTNAP3B-214ENST00000618777 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
CNTNAP3B-214ENST00000618777 DNAJC9-AS1A6NH13 148 aa11.98□□□□□ -0.49
CNTNAP3B-214ENST00000618777 IL17DQ8TAD2 202 aa11.98□□□□□ -0.49
CNTNAP3B-214ENST00000618777 MRGPRG-AS1Q2M3A8 158 aa11.98□□□□□ -0.49
CNTNAP3B-214ENST00000618777 ZNF843Q8N446 348 aa11.98□□□□□ -0.49
CNTNAP3B-214ENST00000618777 TNFRSF13BO14836 293 aaPredicted RBP11.97□□□□□ -0.49
CNTNAP3B-214ENST00000618777 PLA2G2CQ5R387 149 aa11.97□□□□□ -0.49
CNTNAP3B-214ENST00000618777 PLXNB3Q9ULL4 1909 aa11.97□□□□□ -0.49
CNTNAP3B-214ENST00000618777 COL4A6Q14031 1691 aa11.96□□□□□ -0.49
CNTNAP3B-214ENST00000618777 DEFB113Q30KQ7 82 aa11.96□□□□□ -0.49
CNTNAP3B-214ENST00000618777 COL4A3Q01955 1670 aa11.96□□□□□ -0.5
CNTNAP3B-214ENST00000618777 LINC01561Q8N1V8 128 aa11.95□□□□□ -0.5
CNTNAP3B-214ENST00000618777 H0Y9P7 68 aa11.95□□□□□ -0.5
CNTNAP3B-214ENST00000618777 C11orf45Q8TAV5 145 aa11.95□□□□□ -0.5
CNTNAP3B-214ENST00000618777 FSTL3O95633 263 aa11.95□□□□□ -0.5
CNTNAP3B-214ENST00000618777 LINC00575Q6W349 94 aa11.95□□□□□ -0.5
CNTNAP3B-214ENST00000618777 PSMG3-AS1Q96PY0 264 aa11.94□□□□□ -0.5
CNTNAP3B-214ENST00000618777 PCOTHQ58A44 107 aa11.93□□□□□ -0.5
CNTNAP3B-214ENST00000618777 FHL2Q14192 279 aa11.92□□□□□ -0.5
CNTNAP3B-214ENST00000618777 IGF2-ASQ6U949 168 aa11.92□□□□□ -0.5
CNTNAP3B-214ENST00000618777 DAZAP2Q15038 168 aaPredicted RBP11.92□□□□□ -0.5
CNTNAP3B-214ENST00000618777 CYSRT1A8MQ03 144 aa11.92□□□□□ -0.5
CNTNAP3B-214ENST00000618777 BBC3Q96PG8 261 aaPredicted RBP11.91□□□□□ -0.5
CNTNAP3B-214ENST00000618777 PCNX3Q9H6A9 2034 aa11.91□□□□□ -0.5
CNTNAP3B-214ENST00000618777 SPAG11AQ6PDA7 123 aa11.91□□□□□ -0.5
CNTNAP3B-214ENST00000618777 AMELXQ99217 191 aa11.91□□□□□ -0.5
CNTNAP3B-214ENST00000618777 ANAPC1Q9H1A4 1944 aa11.91□□□□□ -0.5
CNTNAP3B-214ENST00000618777 IGLV2-18A0A075B6J9 118 aa11.91□□□□□ -0.5
CNTNAP3B-214ENST00000618777 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.91□□□□□ -0.5
CNTNAP3B-214ENST00000618777 RPL37AP8A6NKH3 93 aa11.9□□□□□ -0.5
CNTNAP3B-214ENST00000618777 HCG22E2RYF7 251 aa11.9□□□□□ -0.5
CNTNAP3B-214ENST00000618777 LELP1Q5T871 98 aa11.9□□□□□ -0.5
CNTNAP3B-214ENST00000618777 LMO4P61968 165 aa11.9□□□□□ -0.5
CNTNAP3B-214ENST00000618777 C10orf25Q5T742 122 aa11.9□□□□□ -0.5
CNTNAP3B-214ENST00000618777 FBXL19-AS1Q494R0 122 aa11.89□□□□□ -0.51
CNTNAP3B-214ENST00000618777 KIAA1671Q9BY89 1806 aa11.88□□□□□ -0.51
CNTNAP3B-214ENST00000618777 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
CNTNAP3B-214ENST00000618777 PIP4P1Q86T03 277 aa11.88□□□□□ -0.51
CNTNAP3B-214ENST00000618777 COX8CQ7Z4L0 72 aa11.88□□□□□ -0.51
CNTNAP3B-214ENST00000618777 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
CNTNAP3B-214ENST00000618777 LOC100131303A0A0U1RQF7 123 aa11.88□□□□□ -0.51
CNTNAP3B-214ENST00000618777 C8orf87E5RJ46 101 aa11.88□□□□□ -0.51
CNTNAP3B-214ENST00000618777 EGFEM1PQ0D2K5 195 aa11.87□□□□□ -0.51
CNTNAP3B-214ENST00000618777 OTOGLQ3ZCN5 2332 aa11.87□□□□□ -0.51
CNTNAP3B-214ENST00000618777 ADORA2A-AS1P86434 159 aa11.87□□□□□ -0.51
CNTNAP3B-214ENST00000618777 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
CNTNAP3B-214ENST00000618777 TECTAO75443 2155 aa11.86□□□□□ -0.51
CNTNAP3B-214ENST00000618777 ANKHD1Q8IWZ3 2542 aaKnown RBP11.86□□□□□ -0.51
CNTNAP3B-214ENST00000618777 ZNF580Q9UK33 172 aa11.86□□□□□ -0.51
CNTNAP3B-214ENST00000618777 COX6A2Q02221 97 aa11.86□□□□□ -0.51
CNTNAP3B-214ENST00000618777 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
CNTNAP3B-214ENST00000618777 FHL3Q13643 280 aa11.84□□□□□ -0.51
CNTNAP3B-214ENST00000618777 MDFIQ99750 246 aa11.84□□□□□ -0.51
CNTNAP3B-214ENST00000618777 THSD7BQ9C0I4 1608 aa11.84□□□□□ -0.51
CNTNAP3B-214ENST00000618777 MGAMO43451 1857 aa11.84□□□□□ -0.51
CNTNAP3B-214ENST00000618777 IGLV9-49A0A0B4J1Y8 123 aa11.84□□□□□ -0.51
CNTNAP3B-214ENST00000618777 PRR3P79522 188 aaKnown RBP11.83□□□□□ -0.52
CNTNAP3B-214ENST00000618777 FAM208BQ5VWN6 2430 aa11.83□□□□□ -0.52
CNTNAP3B-214ENST00000618777 LINC00474Q9P2X8 69 aa11.83□□□□□ -0.52
CNTNAP3B-214ENST00000618777 ADAMTS9Q9P2N4 1935 aa11.83□□□□□ -0.52
CNTNAP3B-214ENST00000618777 SPG11Q96JI7 2443 aa11.83□□□□□ -0.52
CNTNAP3B-214ENST00000618777 PRM2P04554 102 aa11.82□□□□□ -0.52
CNTNAP3B-214ENST00000618777 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
CNTNAP3B-214ENST00000618777 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
CNTNAP3B-214ENST00000618777 KTN1-AS1Q86SY8 53 aa11.82□□□□□ -0.52
CNTNAP3B-214ENST00000618777 C1orf64Q8NEQ6 169 aa11.81□□□□□ -0.52
CNTNAP3B-214ENST00000618777 NAV3Q8IVL0 2385 aa11.81□□□□□ -0.52
CNTNAP3B-214ENST00000618777 Q6YL49 198 aa11.8□□□□□ -0.52
CNTNAP3B-214ENST00000618777 C9orf116Q5BN46 136 aaPredicted RBP11.8□□□□□ -0.52
CNTNAP3B-214ENST00000618777 CSPG4Q6UVK1 2322 aa11.8□□□□□ -0.52
CNTNAP3B-214ENST00000618777 NUP210Q8TEM1 1887 aaPredicted RBP11.79□□□□□ -0.52
CNTNAP3B-214ENST00000618777 IGHV6-1A0A0B4J1U7 121 aa11.79□□□□□ -0.52
CNTNAP3B-214ENST00000618777 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
CNTNAP3B-214ENST00000618777 A0A087WSZ3 146 aa11.79□□□□□ -0.52
CNTNAP3B-214ENST00000618777 EXPH5Q8NEV8 1989 aa11.79□□□□□ -0.52
CNTNAP3B-214ENST00000618777 LINC00337Q8N6G1 96 aa11.78□□□□□ -0.52
CNTNAP3B-214ENST00000618777 Q9UF83 564 aa11.77□□□□□ -0.52
CNTNAP3B-214ENST00000618777 LINC01546A6NGU7 62 aa11.77□□□□□ -0.53
CNTNAP3B-214ENST00000618777 EML5Q05BV3 1969 aa11.77□□□□□ -0.53
CNTNAP3B-214ENST00000618777 A8MUN3 132 aa11.76□□□□□ -0.53
CNTNAP3B-214ENST00000618777 A0A1B0GU69 56 aa11.76□□□□□ -0.53
CNTNAP3B-214ENST00000618777 J3QKU1 62 aa11.76□□□□□ -0.53
CNTNAP3B-214ENST00000618777 LCA10Q71F78 164 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms