RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 IGKV3OR2-268A0A0C4DH90 116 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 TMEM262E9PQX1 116 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 KPRPQ5T749 579 aaPredicted RBP6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 Q6ZTC4 211 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 Q6ZVH6 145 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 CEND1Q8N111 149 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 FXYD2P54710 66 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 TAL2Q16559 108 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
AL353770.3-201ENST00000616253 A6NDN8 102 aa6.92□□□□□ -1.3
AL353770.3-201ENST00000616253 TMEM238C9JI98 176 aa6.92□□□□□ -1.3
AL353770.3-201ENST00000616253 VAMP3Q15836 100 aa6.92□□□□□ -1.3
AL353770.3-201ENST00000616253 OCIAD2Q56VL3 154 aa6.92□□□□□ -1.3
AL353770.3-201ENST00000616253 DEFB121Q5J5C9 76 aa6.92□□□□□ -1.3
AL353770.3-201ENST00000616253 SH2D6Q7Z4S9 175 aa6.92□□□□□ -1.3
AL353770.3-201ENST00000616253 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
AL353770.3-201ENST00000616253 NANOS2P60321 138 aaKnown RBP6.91□□□□□ -1.3
AL353770.3-201ENST00000616253 MRAPQ8TCY5 172 aa6.91□□□□□ -1.3
AL353770.3-201ENST00000616253 TM2D2Q9BX73 214 aa6.91□□□□□ -1.3
AL353770.3-201ENST00000616253 HUWE1Q7Z6Z7 4374 aaKnown RBP6.91□□□□□ -1.3
AL353770.3-201ENST00000616253 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
AL353770.3-201ENST00000616253 C10orf126Q8N4M7 172 aa6.91□□□□□ -1.3
AL353770.3-201ENST00000616253 TM2D3Q9BRN9 247 aa6.91□□□□□ -1.3
AL353770.3-201ENST00000616253 SMIM1B2RUZ4 78 aa6.9□□□□□ -1.3
AL353770.3-201ENST00000616253 C11orf45Q8TAV5 145 aa6.9□□□□□ -1.3
AL353770.3-201ENST00000616253 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
AL353770.3-201ENST00000616253 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 LELP1Q5T871 98 aa6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 ZFAND6Q6FIF0 208 aa6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 Q8N3U1 123 aa6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 A0A0J9YXY3 114 aa6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 H3BNG1 76 aa6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 SPANXB1Q9NS25 103 aaPredicted RBP6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 NHP2Q9NX24 153 aaKnown RBP6.89□□□□□ -1.31
AL353770.3-201ENST00000616253 K7ERJ3 54 aa6.88□□□□□ -1.31
AL353770.3-201ENST00000616253 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
AL353770.3-201ENST00000616253 NDUFA1O15239 70 aa6.87□□□□□ -1.31
AL353770.3-201ENST00000616253 ANGP03950 147 aaKnown RBP6.87□□□□□ -1.31
AL353770.3-201ENST00000616253 LYPD5Q6UWN5 251 aa6.87□□□□□ -1.31
AL353770.3-201ENST00000616253 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
AL353770.3-201ENST00000616253 RAB37Q96AX2 223 aa6.87□□□□□ -1.31
AL353770.3-201ENST00000616253 IGHV3OR16-9A0A0B4J2B5 98 aa6.86□□□□□ -1.31
AL353770.3-201ENST00000616253 IGHV3-30P01768 117 aa6.86□□□□□ -1.31
AL353770.3-201ENST00000616253 SMIM13P0DJ93 91 aa6.86□□□□□ -1.31
AL353770.3-201ENST00000616253 IGHV3-30-5P0DP03 117 aa6.86□□□□□ -1.31
AL353770.3-201ENST00000616253 SS18Q15532 418 aa6.86□□□□□ -1.31
AL353770.3-201ENST00000616253 XCL1P47992 114 aa6.86□□□□□ -1.31
AL353770.3-201ENST00000616253 LITAFQ99732 161 aa6.86□□□□□ -1.31
AL353770.3-201ENST00000616253 Q9H8V8 135 aa6.86□□□□□ -1.31
AL353770.3-201ENST00000616253 A0A087WZ39 114 aa6.85□□□□□ -1.31
AL353770.3-201ENST00000616253 C9orf118A6NHY6 69 aa6.85□□□□□ -1.31
AL353770.3-201ENST00000616253 A6NJY4 79 aa6.85□□□□□ -1.31
AL353770.3-201ENST00000616253 SCGB1A1P11684 91 aa6.85□□□□□ -1.31
AL353770.3-201ENST00000616253 C5orf38Q86SI9 138 aa6.85□□□□□ -1.31
AL353770.3-201ENST00000616253 NAA38Q9BRA0 125 aaKnown RBP6.85□□□□□ -1.31
AL353770.3-201ENST00000616253 REG3AQ06141 175 aa6.84□□□□□ -1.31
AL353770.3-201ENST00000616253 GTF2H5Q6ZYL4 71 aa6.84□□□□□ -1.31
AL353770.3-201ENST00000616253 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.31
AL353770.3-201ENST00000616253 A0A1B0GWB2 263 aa6.84□□□□□ -1.32
AL353770.3-201ENST00000616253 H3BUT2 72 aa6.84□□□□□ -1.32
AL353770.3-201ENST00000616253 COX7B2Q8TF08 81 aa6.84□□□□□ -1.32
AL353770.3-201ENST00000616253 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.32
AL353770.3-201ENST00000616253 IGLV10-54A0A075B6I4 117 aa6.83□□□□□ -1.32
AL353770.3-201ENST00000616253 TRAV10A0A0B4J240 114 aa6.83□□□□□ -1.32
AL353770.3-201ENST00000616253 ADAMTSL4-AS1Q5T5F5 129 aa6.83□□□□□ -1.32
AL353770.3-201ENST00000616253 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
AL353770.3-201ENST00000616253 TOMM7Q9P0U1 55 aa6.83□□□□□ -1.32
AL353770.3-201ENST00000616253 TIMM17BO60830 172 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 IGHV3-33P01772 117 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 WFDC10BQ8IUB3 73 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 MUSTN1Q8IVN3 82 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 SPANXDQ9BXN6 97 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 SPANXCQ9NY87 97 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 MIAQ16674 131 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 ESRGQ1W209 222 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 CD164L2Q6UWJ8 174 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 KLK12Q9UKR0 248 aa6.82□□□□□ -1.32
AL353770.3-201ENST00000616253 A0A1B0GV72 72 aa6.81□□□□□ -1.32
AL353770.3-201ENST00000616253 APOMO95445 188 aa6.81□□□□□ -1.32
AL353770.3-201ENST00000616253 RPL24P83731 157 aaKnown RBP6.81□□□□□ -1.32
AL353770.3-201ENST00000616253 DAND5Q8N907 189 aa6.81□□□□□ -1.32
AL353770.3-201ENST00000616253 A4D1N5 150 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 PRSS2P07478 247 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 NPC2P61916 151 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 HERV-K104P63124 156 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 MEIG1Q5JSS6 88 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 PRR34Q9NV39 138 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 COL7A1Q02388 2944 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 A0A0U1RRA0 63 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 A0A1W2PPM0 123 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 GAGE10A6NGK3 116 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 IGLL5B9A064 214 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 COX7A2LO14548 114 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 CFC1BP0CG36 223 aa6.8□□□□□ -1.32
AL353770.3-201ENST00000616253 CFC1P0CG37 223 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms