RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 CACNA1HO95180 2353 aa9.75□□□□□ -0.85
NLRC3-204ENST00000615877 RIF1Q5UIP0 2472 aaKnown RBP9.75□□□□□ -0.85
NLRC3-204ENST00000615877 SERP1Q9Y6X1 66 aa9.75□□□□□ -0.85
NLRC3-204ENST00000615877 BRI3O95415 125 aa9.75□□□□□ -0.85
NLRC3-204ENST00000615877 DHRS4-AS1Q9P1J3 65 aa9.75□□□□□ -0.85
NLRC3-204ENST00000615877 IGIPA6NJ69 53 aa9.75□□□□□ -0.85
NLRC3-204ENST00000615877 Q8N6K4 173 aa9.74□□□□□ -0.85
NLRC3-204ENST00000615877 FREM1Q5H8C1 2179 aa9.74□□□□□ -0.85
NLRC3-204ENST00000615877 IGLV5-52A0A0A0MRZ9 124 aa9.74□□□□□ -0.85
NLRC3-204ENST00000615877 Q6ZVQ6 151 aa9.74□□□□□ -0.85
NLRC3-204ENST00000615877 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
NLRC3-204ENST00000615877 COX17Q14061 63 aa9.73□□□□□ -0.85
NLRC3-204ENST00000615877 SMIM26A0A096LP01 95 aa9.73□□□□□ -0.85
NLRC3-204ENST00000615877 CRIP2P52943 208 aaPredicted RBP9.72□□□□□ -0.85
NLRC3-204ENST00000615877 C11orf71Q6IPW1 123 aa9.71□□□□□ -0.85
NLRC3-204ENST00000615877 PSMG3-AS1Q96PY0 264 aa9.71□□□□□ -0.86
NLRC3-204ENST00000615877 NBASA2RRP1 2371 aa9.71□□□□□ -0.86
NLRC3-204ENST00000615877 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
NLRC3-204ENST00000615877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.71□□□□□ -0.86
NLRC3-204ENST00000615877 LELP1Q5T871 98 aa9.7□□□□□ -0.86
NLRC3-204ENST00000615877 TRAV7A0A075B6U4 112 aa9.7□□□□□ -0.86
NLRC3-204ENST00000615877 EDN2P20800 178 aa9.7□□□□□ -0.86
NLRC3-204ENST00000615877 MED12LQ86YW9 2145 aa9.7□□□□□ -0.86
NLRC3-204ENST00000615877 CDC42SE2Q9NRR3 84 aa9.7□□□□□ -0.86
NLRC3-204ENST00000615877 Q8IZM0 81 aa9.69□□□□□ -0.86
NLRC3-204ENST00000615877 LTBP2Q14767 1821 aa9.69□□□□□ -0.86
NLRC3-204ENST00000615877 CREBBPQ92793 2442 aa9.69□□□□□ -0.86
NLRC3-204ENST00000615877 C10orf25Q5T742 122 aa9.68□□□□□ -0.86
NLRC3-204ENST00000615877 PCNX3Q9H6A9 2034 aa9.68□□□□□ -0.86
NLRC3-204ENST00000615877 TSPEAR-AS2P59090 65 aa9.68□□□□□ -0.86
NLRC3-204ENST00000615877 A0A087WVE0 104 aa9.68□□□□□ -0.86
NLRC3-204ENST00000615877 NTM-AS1Q6ZSK4 140 aa9.68□□□□□ -0.86
NLRC3-204ENST00000615877 COL4A4P53420 1690 aaPredicted RBP9.68□□□□□ -0.86
NLRC3-204ENST00000615877 MED13LQ71F56 2210 aa9.68□□□□□ -0.86
NLRC3-204ENST00000615877 Q8N9L7 120 aa9.67□□□□□ -0.86
NLRC3-204ENST00000615877 ATG2AQ2TAZ0 1938 aa9.67□□□□□ -0.86
NLRC3-204ENST00000615877 DSCAMO60469 2012 aa9.67□□□□□ -0.86
NLRC3-204ENST00000615877 ESRGQ1W209 222 aa9.67□□□□□ -0.86
NLRC3-204ENST00000615877 LINC00242Q5T6M2 205 aa9.66□□□□□ -0.86
NLRC3-204ENST00000615877 KRTAP10-9P60411 292 aa9.66□□□□□ -0.86
NLRC3-204ENST00000615877 A0A087WYN8 130 aa9.66□□□□□ -0.86
NLRC3-204ENST00000615877 Q8N814 137 aa9.66□□□□□ -0.86
NLRC3-204ENST00000615877 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
NLRC3-204ENST00000615877 IGLV1-40P01703 118 aa9.66□□□□□ -0.86
NLRC3-204ENST00000615877 LINC00474Q9P2X8 69 aa9.66□□□□□ -0.86
NLRC3-204ENST00000615877 RPL28P46779 137 aaKnown RBP9.65□□□□□ -0.86
NLRC3-204ENST00000615877 CDSNQ15517 529 aa9.65□□□□□ -0.86
NLRC3-204ENST00000615877 LINC01556Q5JQF7 62 aa9.65□□□□□ -0.86
NLRC3-204ENST00000615877 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
NLRC3-204ENST00000615877 SOSTDC1Q6X4U4 206 aa9.64□□□□□ -0.87
NLRC3-204ENST00000615877 MUC7Q8TAX7 377 aa9.64□□□□□ -0.87
NLRC3-204ENST00000615877 SMIM1B2RUZ4 78 aa9.64□□□□□ -0.87
NLRC3-204ENST00000615877 COX6A2Q02221 97 aa9.64□□□□□ -0.87
NLRC3-204ENST00000615877 C1orf137Q5JT78 98 aa9.64□□□□□ -0.87
NLRC3-204ENST00000615877 C6orf223Q8N319 242 aa9.64□□□□□ -0.87
NLRC3-204ENST00000615877 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
NLRC3-204ENST00000615877 SPINK1P00995 79 aa9.63□□□□□ -0.87
NLRC3-204ENST00000615877 CHCHD7Q9BUK0 85 aa9.63□□□□□ -0.87
NLRC3-204ENST00000615877 CEP192Q8TEP8 1941 aa9.63□□□□□ -0.87
NLRC3-204ENST00000615877 HCFC1P51610 2035 aa9.63□□□□□ -0.87
NLRC3-204ENST00000615877 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
NLRC3-204ENST00000615877 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
NLRC3-204ENST00000615877 MRGPRG-AS1Q2M3A8 158 aa9.62□□□□□ -0.87
NLRC3-204ENST00000615877 A0A096LNJ9 63 aa9.62□□□□□ -0.87
NLRC3-204ENST00000615877 FSHBP01225 129 aa9.62□□□□□ -0.87
NLRC3-204ENST00000615877 PRYO14603 147 aa9.61□□□□□ -0.87
NLRC3-204ENST00000615877 PCDH15Q96QU1 1955 aa9.61□□□□□ -0.87
NLRC3-204ENST00000615877 REG3GQ6UW15 175 aa9.61□□□□□ -0.87
NLRC3-204ENST00000615877 AVPP01185 164 aa9.6□□□□□ -0.87
NLRC3-204ENST00000615877 Q6ZTC4 211 aa9.6□□□□□ -0.87
NLRC3-204ENST00000615877 ZNF580Q9UK33 172 aa9.59□□□□□ -0.87
NLRC3-204ENST00000615877 ZFHX2Q9C0A1 2572 aaPredicted RBP9.58□□□□□ -0.88
NLRC3-204ENST00000615877 C1orf134Q5TEV5 83 aa9.58□□□□□ -0.88
NLRC3-204ENST00000615877 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
NLRC3-204ENST00000615877 PMAIP1Q13794 54 aa9.58□□□□□ -0.88
NLRC3-204ENST00000615877 UNQ6190/PRO20217Q6UXQ8 127 aa9.58□□□□□ -0.88
NLRC3-204ENST00000615877 DEFB116Q30KQ4 102 aa9.58□□□□□ -0.88
NLRC3-204ENST00000615877 AMELXQ99217 191 aa9.58□□□□□ -0.88
NLRC3-204ENST00000615877 TRBV10-3A0A0K0K1G6 114 aa9.58□□□□□ -0.88
NLRC3-204ENST00000615877 TECTAO75443 2155 aa9.57□□□□□ -0.88
NLRC3-204ENST00000615877 LINC00208Q96KT6 92 aa9.57□□□□□ -0.88
NLRC3-204ENST00000615877 COX8CQ7Z4L0 72 aa9.57□□□□□ -0.88
NLRC3-204ENST00000615877 MUC22E2RYF6 1773 aaPredicted RBP9.56□□□□□ -0.88
NLRC3-204ENST00000615877 PTPRQQ9UMZ3 2332 aa9.56□□□□□ -0.88
NLRC3-204ENST00000615877 HIVEP2P31629 2446 aa9.56□□□□□ -0.88
NLRC3-204ENST00000615877 Q8N3U1 123 aa9.56□□□□□ -0.88
NLRC3-204ENST00000615877 EML5Q05BV3 1969 aa9.56□□□□□ -0.88
NLRC3-204ENST00000615877 RAI1Q7Z5J4 1906 aaPredicted RBP9.55□□□□□ -0.88
NLRC3-204ENST00000615877 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
NLRC3-204ENST00000615877 CSDC2Q9Y534 153 aaKnown RBP9.54□□□□□ -0.88
NLRC3-204ENST00000615877 PCOTHQ58A44 107 aa9.54□□□□□ -0.88
NLRC3-204ENST00000615877 CDIP1Q9H305 208 aa9.54□□□□□ -0.88
NLRC3-204ENST00000615877 EGFEM1PQ0D2K5 195 aa9.53□□□□□ -0.88
NLRC3-204ENST00000615877 EXPH5Q8NEV8 1989 aa9.53□□□□□ -0.88
NLRC3-204ENST00000615877 PLXNB1O43157 2135 aa9.53□□□□□ -0.88
NLRC3-204ENST00000615877 TRBV7-7A0A0K0K1E9 115 aa9.53□□□□□ -0.88
NLRC3-204ENST00000615877 PSPHP1O15172 72 aa9.52□□□□□ -0.89
NLRC3-204ENST00000615877 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
NLRC3-204ENST00000615877 Q9BRP9 147 aa9.51□□□□□ -0.89
NLRC3-204ENST00000615877 ODF3L2Q3SX64 289 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms