RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TMEM126AQ9H061 195 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 RBMY1BA6NDE4 496 aaKnown RBP8.59□□□□□ -1.03
CDH5-208ENST00000614547 A6NDX4 124 aa8.59□□□□□ -1.03
CDH5-208ENST00000614547 RBMY1EA6NEQ0 496 aaKnown RBP8.59□□□□□ -1.03
CDH5-208ENST00000614547 B4DSR2 109 aa8.59□□□□□ -1.03
CDH5-208ENST00000614547 RBMY1DP0C7P1 496 aaKnown RBP8.59□□□□□ -1.03
CDH5-208ENST00000614547 RBMY1A1P0DJD3 496 aaKnown RBP8.59□□□□□ -1.03
CDH5-208ENST00000614547 RBMY1CP0DJD4 496 aa8.59□□□□□ -1.03
CDH5-208ENST00000614547 UBE2D4Q9Y2X8 147 aa8.59□□□□□ -1.03
CDH5-208ENST00000614547 NBPF19A0A087WUL8 3843 aa8.59□□□□□ -1.03
CDH5-208ENST00000614547 FBXL19-AS1Q494R0 122 aa8.59□□□□□ -1.03
CDH5-208ENST00000614547 NCR3O14931 201 aa8.59□□□□□ -1.04
CDH5-208ENST00000614547 MXRA5Q9NR99 2828 aa8.58□□□□□ -1.04
CDH5-208ENST00000614547 AVPP01185 164 aa8.58□□□□□ -1.04
CDH5-208ENST00000614547 C3orf22Q8N5N4 141 aa8.58□□□□□ -1.04
CDH5-208ENST00000614547 WFDC9Q8NEX5 89 aa8.58□□□□□ -1.04
CDH5-208ENST00000614547 APCP25054 2843 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 K7EMT4 169 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 ACYP1P07311 99 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 MAST4O15021 2626 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 H3BUA1 57 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 MALP21145 153 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 XCL1P47992 114 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 TMEM243Q9BU79 118 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 Q6Q795 121 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 Q6ZTI0 123 aa8.57□□□□□ -1.04
CDH5-208ENST00000614547 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
CDH5-208ENST00000614547 FAM110AQ9BQ89 295 aa8.56□□□□□ -1.04
CDH5-208ENST00000614547 ZFHX3Q15911 3703 aa8.56□□□□□ -1.04
CDH5-208ENST00000614547 TRAV13-2A0A0B4J235 113 aa8.56□□□□□ -1.04
CDH5-208ENST00000614547 NBEAL2Q6ZNJ1 2754 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 TRAV23DV6A0A075B6W5 121 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 UQCRQO14949 82 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 NDUFA1O15239 70 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 VPREB3Q9UKI3 123 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 MGAM2Q2M2H8 2515 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 HAMPP81172 84 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
CDH5-208ENST00000614547 SETXQ7Z333 2677 aaKnown RBP8.54□□□□□ -1.04
CDH5-208ENST00000614547 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
CDH5-208ENST00000614547 CITED2Q99967 270 aaPredicted RBP8.54□□□□□ -1.04
CDH5-208ENST00000614547 J3KT08 172 aa8.53□□□□□ -1.04
CDH5-208ENST00000614547 TMEM86BQ8N661 226 aa8.53□□□□□ -1.04
CDH5-208ENST00000614547 DSCR8Q96T75 97 aa8.53□□□□□ -1.04
CDH5-208ENST00000614547 LITAFQ99732 161 aa8.53□□□□□ -1.04
CDH5-208ENST00000614547 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
CDH5-208ENST00000614547 HTN3P15516 51 aa8.53□□□□□ -1.04
CDH5-208ENST00000614547 FAM19A4Q96LR4 140 aa8.53□□□□□ -1.04
CDH5-208ENST00000614547 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
CDH5-208ENST00000614547 SOSTDC1Q6X4U4 206 aa8.52□□□□□ -1.04
CDH5-208ENST00000614547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.52□□□□□ -1.04
CDH5-208ENST00000614547 C10orf105Q8TEF2 133 aa8.52□□□□□ -1.04
CDH5-208ENST00000614547 COX7B2Q8TF08 81 aa8.52□□□□□ -1.04
CDH5-208ENST00000614547 ATOX1O00244 68 aa8.52□□□□□ -1.05
CDH5-208ENST00000614547 RNF152Q8N8N0 203 aa8.52□□□□□ -1.05
CDH5-208ENST00000614547 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
CDH5-208ENST00000614547 ESM1Q9NQ30 184 aa8.52□□□□□ -1.05
CDH5-208ENST00000614547 S100A7L2Q5SY68 101 aa8.52□□□□□ -1.05
CDH5-208ENST00000614547 ZNF843Q8N446 348 aa8.52□□□□□ -1.05
CDH5-208ENST00000614547 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
CDH5-208ENST00000614547 IGLV1-40P01703 118 aa8.51□□□□□ -1.05
CDH5-208ENST00000614547 Q96MF0 132 aa8.51□□□□□ -1.05
CDH5-208ENST00000614547 A0A087WYN8 130 aa8.5□□□□□ -1.05
CDH5-208ENST00000614547 PSMB8P28062 276 aa8.5□□□□□ -1.05
CDH5-208ENST00000614547 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
CDH5-208ENST00000614547 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
CDH5-208ENST00000614547 K7EQD1 137 aa8.5□□□□□ -1.05
CDH5-208ENST00000614547 SMIM11BQ8TCY0 68 aa8.5□□□□□ -1.05
CDH5-208ENST00000614547 FAM240AA0A1B0GVK7 77 aa8.49□□□□□ -1.05
CDH5-208ENST00000614547 COX7CP15954 63 aa8.49□□□□□ -1.05
CDH5-208ENST00000614547 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
CDH5-208ENST00000614547 C20orf197Q8N268 126 aa8.49□□□□□ -1.05
CDH5-208ENST00000614547 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
CDH5-208ENST00000614547 TENM4Q6N022 2769 aa8.48□□□□□ -1.05
CDH5-208ENST00000614547 ORMDL1Q9P0S3 153 aa8.48□□□□□ -1.05
CDH5-208ENST00000614547 PLA2G2AP14555 144 aa8.48□□□□□ -1.05
CDH5-208ENST00000614547 DNAJC30Q96LL9 226 aa8.48□□□□□ -1.05
CDH5-208ENST00000614547 WFDC10AQ9H1F0 79 aa8.48□□□□□ -1.05
CDH5-208ENST00000614547 GHRHP01286 108 aa8.47□□□□□ -1.05
CDH5-208ENST00000614547 LINC01356Q8N9X3 169 aa8.47□□□□□ -1.05
CDH5-208ENST00000614547 WFDC11Q8NEX6 87 aa8.47□□□□□ -1.05
CDH5-208ENST00000614547 NOTCH1P46531 2555 aa8.47□□□□□ -1.05
CDH5-208ENST00000614547 USP17L23D6RBM5 183 aa8.47□□□□□ -1.05
CDH5-208ENST00000614547 CXCL5P42830 114 aa8.46□□□□□ -1.05
CDH5-208ENST00000614547 ENHOQ6UWT2 76 aa8.46□□□□□ -1.05
CDH5-208ENST00000614547 KIR2DL5BQ8NHK3 375 aa8.46□□□□□ -1.05
CDH5-208ENST00000614547 TRBV7-7A0A0K0K1E9 115 aa8.46□□□□□ -1.06
CDH5-208ENST00000614547 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
CDH5-208ENST00000614547 HILS1P60008 231 aa8.46□□□□□ -1.06
CDH5-208ENST00000614547 OVOL2Q9BRP0 275 aa8.46□□□□□ -1.06
CDH5-208ENST00000614547 UBL5Q9BZL1 73 aa8.46□□□□□ -1.06
CDH5-208ENST00000614547 LINC00846Q9NV44 126 aa8.46□□□□□ -1.06
CDH5-208ENST00000614547 STAB1Q9NY15 2570 aa8.46□□□□□ -1.06
CDH5-208ENST00000614547 TIMM17BO60830 172 aa8.45□□□□□ -1.06
CDH5-208ENST00000614547 CCL18P55774 89 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms