RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 PAX4O43316 350 aa7.85□□□□□ -1.15
PCDHGC3-202ENST00000611950 DEFB136Q30KP8 78 aa7.85□□□□□ -1.15
PCDHGC3-202ENST00000611950 DEFB121Q5J5C9 76 aa7.85□□□□□ -1.15
PCDHGC3-202ENST00000611950 IGLV4-69A0A075B6H9 119 aa7.85□□□□□ -1.15
PCDHGC3-202ENST00000611950 LINC00643Q86TS7 51 aa7.85□□□□□ -1.15
PCDHGC3-202ENST00000611950 DCANP1Q8TF63 244 aa7.85□□□□□ -1.15
PCDHGC3-202ENST00000611950 PROK1P58294 105 aa7.84□□□□□ -1.15
PCDHGC3-202ENST00000611950 PRR15Q8IV56 129 aa7.84□□□□□ -1.15
PCDHGC3-202ENST00000611950 KIF25-AS1Q9Y6Z4 181 aa7.84□□□□□ -1.15
PCDHGC3-202ENST00000611950 DEFB112Q30KQ8 113 aa7.84□□□□□ -1.15
PCDHGC3-202ENST00000611950 CR1P17927 2039 aa7.84□□□□□ -1.15
PCDHGC3-202ENST00000611950 SS18Q15532 418 aa7.84□□□□□ -1.16
PCDHGC3-202ENST00000611950 B4DSR2 109 aa7.83□□□□□ -1.16
PCDHGC3-202ENST00000611950 KLLNB2CW77 178 aa7.83□□□□□ -1.16
PCDHGC3-202ENST00000611950 ZNF876PQ49A33 203 aa7.83□□□□□ -1.16
PCDHGC3-202ENST00000611950 C18orf65Q6ZTR6 163 aa7.83□□□□□ -1.16
PCDHGC3-202ENST00000611950 IGIPA6NJ69 53 aa7.82□□□□□ -1.16
PCDHGC3-202ENST00000611950 NDUFA11Q86Y39 141 aa7.82□□□□□ -1.16
PCDHGC3-202ENST00000611950 ACYP1P07311 99 aa7.82□□□□□ -1.16
PCDHGC3-202ENST00000611950 POLR2KP53803 58 aaKnown RBP7.82□□□□□ -1.16
PCDHGC3-202ENST00000611950 FHL2Q14192 279 aa7.82□□□□□ -1.16
PCDHGC3-202ENST00000611950 TRBV10-2A0A0K0K1G8 114 aa7.81□□□□□ -1.16
PCDHGC3-202ENST00000611950 RPL18AQ02543 176 aaKnown RBP7.81□□□□□ -1.16
PCDHGC3-202ENST00000611950 KRTAP1-1Q07627 177 aa7.81□□□□□ -1.16
PCDHGC3-202ENST00000611950 A0A0J9YY99 117 aa7.81□□□□□ -1.16
PCDHGC3-202ENST00000611950 VCYO14598 125 aa7.81□□□□□ -1.16
PCDHGC3-202ENST00000611950 APOC4P55056 127 aa7.81□□□□□ -1.16
PCDHGC3-202ENST00000611950 RBM12B-AS1Q9P1G2 102 aa7.81□□□□□ -1.16
PCDHGC3-202ENST00000611950 IGHV4OR15-8A0A075B7B6 117 aa7.8□□□□□ -1.16
PCDHGC3-202ENST00000611950 A0A087WW49 117 aa7.8□□□□□ -1.16
PCDHGC3-202ENST00000611950 IGHV3-16A0A0C4DH30 117 aa7.8□□□□□ -1.16
PCDHGC3-202ENST00000611950 A0A0J9YXV3 536 aa7.8□□□□□ -1.16
PCDHGC3-202ENST00000611950 MED14OSP0DP75 135 aa7.8□□□□□ -1.16
PCDHGC3-202ENST00000611950 SMCR5Q8TEV8 140 aa7.8□□□□□ -1.16
PCDHGC3-202ENST00000611950 K7EMT4 169 aa7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 SNRPD3P62318 126 aaKnown RBP7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 A0A0J9YX75 114 aa7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 NXPH4O95158 308 aa7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 RBMY1A1P0DJD3 496 aaKnown RBP7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 RBMY1CP0DJD4 496 aa7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 HOXD3P31249 432 aaPredicted RBP7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 RBMY1FQ15415 496 aaKnown RBP7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 A0A096LNT2 108 aa7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 IGHV3-38A0A0C4DH36 116 aa7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 M0QY20 66 aa7.79□□□□□ -1.16
PCDHGC3-202ENST00000611950 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 TRAV8-3A0A0A6YYJ7 113 aa7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 CFC1BP0CG36 223 aa7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 CFC1P0CG37 223 aa7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 SLURP1P55000 103 aa7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 DSCR9P59020 149 aa7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 SDIM1Q6ZPB5 146 aa7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 PPP1R17O96001 155 aa7.78□□□□□ -1.16
PCDHGC3-202ENST00000611950 DEFB131AP59861 70 aa7.77□□□□□ -1.17
PCDHGC3-202ENST00000611950 TMEM243Q9BU79 118 aa7.77□□□□□ -1.17
PCDHGC3-202ENST00000611950 LINC00474Q9P2X8 69 aa7.77□□□□□ -1.17
PCDHGC3-202ENST00000611950 TNP2Q05952 138 aa7.77□□□□□ -1.17
PCDHGC3-202ENST00000611950 ATXN8Q156A1 80 aa7.77□□□□□ -1.17
PCDHGC3-202ENST00000611950 Q1RN00 199 aa7.77□□□□□ -1.17
PCDHGC3-202ENST00000611950 CD164L2Q6UWJ8 174 aa7.77□□□□□ -1.17
PCDHGC3-202ENST00000611950 LINC01356Q8N9X3 169 aa7.77□□□□□ -1.17
PCDHGC3-202ENST00000611950 IGHV3OR16-12A0A075B7B8 117 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 TRBV27A0A0K0K1C4 114 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 IGHV3-30P01768 117 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 PRSS2P07478 247 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 IGHV3-30-5P0DP03 117 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 C2orf82Q6UX34 121 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 Q6ZSV7 163 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 NBEAL2Q6ZNJ1 2754 aa7.76□□□□□ -1.17
PCDHGC3-202ENST00000611950 K7EQG2 157 aa7.75□□□□□ -1.17
PCDHGC3-202ENST00000611950 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.75□□□□□ -1.17
PCDHGC3-202ENST00000611950 IGKV2-29A2NJV5 120 aaPredicted RBP7.75□□□□□ -1.17
PCDHGC3-202ENST00000611950 CD28P10747 220 aa7.75□□□□□ -1.17
PCDHGC3-202ENST00000611950 LAMTOR3Q9UHA4 124 aa7.75□□□□□ -1.17
PCDHGC3-202ENST00000611950 TRBV7-6A0A0J9YX20 115 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 EIF4EBP3O60516 100 aaPredicted RBP7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 MUSTN1Q8IVN3 82 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 AMELXQ99217 191 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 TIMM17AQ99595 171 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 IGLV4-3A0A075B6K6 122 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 VPREB1P12018 145 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 Q6ZSN1 163 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 SLC25A29Q8N8R3 303 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 DAND5Q8N907 189 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 TMEM141Q96I45 108 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 PRO1854Q9UHT4 67 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 C20orf203Q8NBC4 194 aa7.74□□□□□ -1.17
PCDHGC3-202ENST00000611950 ANK3Q12955 4377 aaKnown RBP7.73□□□□□ -1.17
PCDHGC3-202ENST00000611950 TIMM17BO60830 172 aa7.73□□□□□ -1.17
PCDHGC3-202ENST00000611950 KRTAP24-1Q3LI83 254 aa7.73□□□□□ -1.17
PCDHGC3-202ENST00000611950 PLAC8L1A1L4L8 177 aa7.73□□□□□ -1.17
PCDHGC3-202ENST00000611950 I3L3M4 83 aa7.73□□□□□ -1.17
PCDHGC3-202ENST00000611950 MRPS36P82909 103 aaKnown RBP7.73□□□□□ -1.17
PCDHGC3-202ENST00000611950 PAPPA-AS1Q5QFB9 102 aa7.73□□□□□ -1.17
PCDHGC3-202ENST00000611950 ZNF702PQ9H963 129 aa7.73□□□□□ -1.17
PCDHGC3-202ENST00000611950 C6orf223Q8N319 242 aa7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 COPS9Q8WXC6 57 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms