RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SMIM13P0DJ93 91 aa6.11□□□□□ -1.43
SMAD4-217ENST00000611848 CCL18P55774 89 aa6.11□□□□□ -1.43
SMAD4-217ENST00000611848 UBE2DNLQ8IWF7 75 aa6.11□□□□□ -1.43
SMAD4-217ENST00000611848 VCX2Q9H322 139 aa6.11□□□□□ -1.43
SMAD4-217ENST00000611848 SPANXA1Q9NS26 97 aa6.11□□□□□ -1.43
SMAD4-217ENST00000611848 ICOSQ9Y6W8 199 aa6.11□□□□□ -1.43
SMAD4-217ENST00000611848 A0A096LPF7 62 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 TRBV10-1A0A0K0K1A3 114 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 TMEM223A0PJW6 202 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 ZNF815PA8K554 130 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 MRPL23Q16540 153 aaKnown RBP6.1□□□□□ -1.43
SMAD4-217ENST00000611848 TMEM170BQ5T4T1 132 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 UBE2D4Q9Y2X8 147 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 TRBV6-4A0A1B0GX49 114 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 ZNF22P17026 224 aaPredicted RBP6.1□□□□□ -1.43
SMAD4-217ENST00000611848 TSPEAR-AS2P59090 65 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 MRPS36P82909 103 aaKnown RBP6.1□□□□□ -1.43
SMAD4-217ENST00000611848 COTL1Q14019 142 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
SMAD4-217ENST00000611848 A0A0J9YXV3 536 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 A0A1B0GWB2 263 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 H3BUT2 72 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 K7EQD1 137 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 LEPROTO15243 131 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 GYPEP15421 78 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 OR5A1Q8NGJ0 315 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 TIMM21Q9BVV7 248 aa6.09□□□□□ -1.43
SMAD4-217ENST00000611848 A0A1W2PPM0 123 aa6.08□□□□□ -1.44
SMAD4-217ENST00000611848 J3QQQ9 107 aa6.08□□□□□ -1.44
SMAD4-217ENST00000611848 SH2D6Q7Z4S9 175 aa6.08□□□□□ -1.44
SMAD4-217ENST00000611848 SLC25A29Q8N8R3 303 aa6.08□□□□□ -1.44
SMAD4-217ENST00000611848 RAB37Q96AX2 223 aa6.08□□□□□ -1.44
SMAD4-217ENST00000611848 SPANXB1Q9NS25 103 aaPredicted RBP6.08□□□□□ -1.44
SMAD4-217ENST00000611848 LINC00588Q9Y4M8 146 aa6.08□□□□□ -1.44
SMAD4-217ENST00000611848 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.07□□□□□ -1.44
SMAD4-217ENST00000611848 IGHV3-38A0A0C4DH36 116 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 TINCRA0A1B0GVN0 87 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 IGKV2-29A2NJV5 120 aaPredicted RBP6.07□□□□□ -1.44
SMAD4-217ENST00000611848 GAGE10A6NGK3 116 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 H3BS24 57 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 K7EP34 96 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 K7ERJ3 54 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 UBE2D3P61077 147 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 UBE2D2P62837 147 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 RPL36AP83881 106 aaKnown RBP6.07□□□□□ -1.44
SMAD4-217ENST00000611848 ESRGQ1W209 222 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 SCGB1D4Q6XE38 83 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 DAZ4Q86SG3 579 aaKnown RBP6.07□□□□□ -1.44
SMAD4-217ENST00000611848 RPL36ALQ969Q0 106 aaKnown RBP6.07□□□□□ -1.44
SMAD4-217ENST00000611848 DAZ3Q9NR90 486 aaKnown RBP6.07□□□□□ -1.44
SMAD4-217ENST00000611848 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
SMAD4-217ENST00000611848 LGALS3P17931 250 aaKnown RBP6.07□□□□□ -1.44
SMAD4-217ENST00000611848 GTF2H5Q6ZYL4 71 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 UPK3BQ9BT76 320 aa6.07□□□□□ -1.44
SMAD4-217ENST00000611848 FABP2P12104 132 aa6.06□□□□□ -1.44
SMAD4-217ENST00000611848 UBE2D1P51668 147 aa6.06□□□□□ -1.44
SMAD4-217ENST00000611848 CFAP161Q6P656 301 aa6.06□□□□□ -1.44
SMAD4-217ENST00000611848 LYPD5Q6UWN5 251 aa6.06□□□□□ -1.44
SMAD4-217ENST00000611848 NTM-AS1Q6ZSK4 140 aa6.06□□□□□ -1.44
SMAD4-217ENST00000611848 Q6ZUT4 128 aa6.06□□□□□ -1.44
SMAD4-217ENST00000611848 NAA38Q9BRA0 125 aaKnown RBP6.06□□□□□ -1.44
SMAD4-217ENST00000611848 GTSF1LQ9H1H1 148 aa6.06□□□□□ -1.44
SMAD4-217ENST00000611848 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
SMAD4-217ENST00000611848 DNAH10Q8IVF4 4471 aa6.05□□□□□ -1.44
SMAD4-217ENST00000611848 LOC100131303A0A0U1RQF7 123 aa6.05□□□□□ -1.44
SMAD4-217ENST00000611848 TIRAPP58753 221 aa6.05□□□□□ -1.44
SMAD4-217ENST00000611848 SRSF9Q13242 221 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMAD4-217ENST00000611848 FAM19A3Q7Z5A8 133 aa6.05□□□□□ -1.44
SMAD4-217ENST00000611848 Q9H8V8 135 aa6.05□□□□□ -1.44
SMAD4-217ENST00000611848 IGLV5-45A0A087WSX0 123 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 GAGE12JA6NER3 117 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 IGHV3-30P01768 117 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 IGHV3-30-5P0DP03 117 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 GAGE4Q13068 117 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 GAGE5Q13069 117 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 GAGE13Q4V321 117 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 RNASE13Q5GAN3 156 aaKnown RBP6.04□□□□□ -1.44
SMAD4-217ENST00000611848 ATP6V0E2Q8NHE4 81 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 SPCS1Q9Y6A9 102 aa6.04□□□□□ -1.44
SMAD4-217ENST00000611848 DNAH2Q9P225 4427 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 IGHV1-58A0A0C4DH39 117 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 LINC00694P0DN24 101 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 IGHV3-30-3P0DP02 117 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 SMAGPQ0VAQ4 97 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 M0R2N4 97 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 DGAT2L7PQ6IED9 249 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 Q6ZR54 194 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 C10orf126Q8N4M7 172 aa6.03□□□□□ -1.44
SMAD4-217ENST00000611848 IGHV3-64A0A075B6Q5 118 aa6.02□□□□□ -1.45
SMAD4-217ENST00000611848 A0A0J9YXY3 114 aa6.02□□□□□ -1.45
SMAD4-217ENST00000611848 NBDYA0A0U1RRE5 68 aa6.02□□□□□ -1.45
SMAD4-217ENST00000611848 H7C423 109 aa6.02□□□□□ -1.45
SMAD4-217ENST00000611848 TTC32Q5I0X7 151 aa6.02□□□□□ -1.45
SMAD4-217ENST00000611848 GEMIN7Q9H840 131 aaKnown RBP6.02□□□□□ -1.45
SMAD4-217ENST00000611848 DNAH17Q9UFH2 4485 aa6.02□□□□□ -1.45
SMAD4-217ENST00000611848 TRAV8-3A0A0A6YYJ7 113 aa6.01□□□□□ -1.45
SMAD4-217ENST00000611848 HERVK_113P63121 156 aa6.01□□□□□ -1.45
SMAD4-217ENST00000611848 LELP1Q5T871 98 aa6.01□□□□□ -1.45
SMAD4-217ENST00000611848 LITAFQ99732 161 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms