RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 ZNF561-AS1K7EIQ3 104 aa16.69■□□□□ 0.26
VEGFA-226ENST00000611736 LINC00528Q8N1L1 170 aa16.68■□□□□ 0.26
VEGFA-226ENST00000611736 TEX43Q6ZNM6 134 aa16.67■□□□□ 0.26
VEGFA-226ENST00000611736 ZC2HC1BQ5TFG8 222 aa16.66■□□□□ 0.26
VEGFA-226ENST00000611736 Q6ZN92 141 aa16.66■□□□□ 0.26
VEGFA-226ENST00000611736 TRAPPC1Q9Y5R8 145 aa16.66■□□□□ 0.26
VEGFA-226ENST00000611736 CHTF8P0CG12 524 aa16.65■□□□□ 0.26
VEGFA-226ENST00000611736 COX6A2Q02221 97 aa16.65■□□□□ 0.26
VEGFA-226ENST00000611736 SLC7A5P1Q8MH63 180 aa16.65■□□□□ 0.26
VEGFA-226ENST00000611736 CARD19Q96LW7 228 aa16.65■□□□□ 0.26
VEGFA-226ENST00000611736 IGHV3OR16-9A0A0B4J2B5 98 aa16.64■□□□□ 0.25
VEGFA-226ENST00000611736 IGIPA6NJ69 53 aa16.64■□□□□ 0.25
VEGFA-226ENST00000611736 APOMO95445 188 aa16.64■□□□□ 0.25
VEGFA-226ENST00000611736 G0S2P27469 103 aa16.64■□□□□ 0.25
VEGFA-226ENST00000611736 C2orf88Q9BSF0 95 aa16.64■□□□□ 0.25
VEGFA-226ENST00000611736 IGLV4-69A0A075B6H9 119 aa16.63■□□□□ 0.25
VEGFA-226ENST00000611736 TOMM6Q96B49 74 aa16.63■□□□□ 0.25
VEGFA-226ENST00000611736 VCX2Q9H322 139 aa16.63■□□□□ 0.25
VEGFA-226ENST00000611736 SYCNQ0VAF6 134 aa16.62■□□□□ 0.25
VEGFA-226ENST00000611736 LINC00173Q6ZV60 143 aa16.62■□□□□ 0.25
VEGFA-226ENST00000611736 FA2HQ7L5A8 372 aa16.62■□□□□ 0.25
VEGFA-226ENST00000611736 NPSP0C0P6 89 aa16.61■□□□□ 0.25
VEGFA-226ENST00000611736 UBE2D1P51668 147 aa16.61■□□□□ 0.25
VEGFA-226ENST00000611736 LINC00242Q5T6M2 205 aa16.61■□□□□ 0.25
VEGFA-226ENST00000611736 DPH3Q96FX2 82 aa16.61■□□□□ 0.25
VEGFA-226ENST00000611736 AMELXQ99217 191 aa16.61■□□□□ 0.25
VEGFA-226ENST00000611736 LINC01546A6NGU7 62 aa16.6■□□□□ 0.25
VEGFA-226ENST00000611736 INAFM2P0DMQ5 153 aa16.6■□□□□ 0.25
VEGFA-226ENST00000611736 SPAG11BQ08648 103 aa16.6■□□□□ 0.25
VEGFA-226ENST00000611736 CIRBPQ14011 172 aaKnown RBP16.6■□□□□ 0.25
VEGFA-226ENST00000611736 SMCO4Q9NRQ5 59 aa16.6■□□□□ 0.25
VEGFA-226ENST00000611736 SPACA4Q8TDM5 124 aa16.59■□□□□ 0.25
VEGFA-226ENST00000611736 ORAOV1Q8WV07 137 aa16.59■□□□□ 0.25
VEGFA-226ENST00000611736 TIMM17AQ99595 171 aa16.59■□□□□ 0.25
VEGFA-226ENST00000611736 FLG2Q5D862 2391 aaPredicted RBP16.58■□□□□ 0.25
VEGFA-226ENST00000611736 IGKV2-24A0A0C4DH68 120 aa16.58■□□□□ 0.24
VEGFA-226ENST00000611736 PLA2G1BP04054 148 aaKnown RBP16.58■□□□□ 0.24
VEGFA-226ENST00000611736 YPEL4Q96NS1 127 aa16.58■□□□□ 0.24
VEGFA-226ENST00000611736 SCGB3A1Q96QR1 104 aa16.58■□□□□ 0.24
VEGFA-226ENST00000611736 CAMK2N2Q96S95 79 aa16.58■□□□□ 0.24
VEGFA-226ENST00000611736 PAPPA-AS1Q5QFB9 102 aa16.57■□□□□ 0.24
VEGFA-226ENST00000611736 Q6ZRU5 148 aa16.57■□□□□ 0.24
VEGFA-226ENST00000611736 OR10D4PQ8NGN7 298 aa16.57■□□□□ 0.24
VEGFA-226ENST00000611736 CBLN2Q8IUK8 224 aa16.56■□□□□ 0.24
VEGFA-226ENST00000611736 C2orf48Q96LS8 159 aa16.56■□□□□ 0.24
VEGFA-226ENST00000611736 A0A087WYN8 130 aa16.55■□□□□ 0.24
VEGFA-226ENST00000611736 A0A087WZ39 114 aa16.55■□□□□ 0.24
VEGFA-226ENST00000611736 MAJINQ3KP22 176 aa16.55■□□□□ 0.24
VEGFA-226ENST00000611736 ERASQ7Z444 233 aa16.55■□□□□ 0.24
VEGFA-226ENST00000611736 C18orf32Q8TCD1 76 aa16.55■□□□□ 0.24
VEGFA-226ENST00000611736 A0A096LNI7 61 aa16.54■□□□□ 0.24
VEGFA-226ENST00000611736 PKIGQ9Y2B9 76 aa16.52■□□□□ 0.24
VEGFA-226ENST00000611736 MYCBP2O75592 4640 aa16.52■□□□□ 0.23
VEGFA-226ENST00000611736 LINC01549A6NIU2 74 aa16.51■□□□□ 0.23
VEGFA-226ENST00000611736 URB1-AS1Q96HZ7 61 aa16.5■□□□□ 0.23
VEGFA-226ENST00000611736 PLAC8Q9NZF1 115 aa16.49■□□□□ 0.23
VEGFA-226ENST00000611736 A0A0J9YXV3 536 aa16.48■□□□□ 0.23
VEGFA-226ENST00000611736 LOC107984640A0A0U1RRK4 108 aa16.48■□□□□ 0.23
VEGFA-226ENST00000611736 LINC00614P0C842 121 aa16.48■□□□□ 0.23
VEGFA-226ENST00000611736 FAM19A3Q7Z5A8 133 aa16.48■□□□□ 0.23
VEGFA-226ENST00000611736 NDUFA1O15239 70 aa16.47■□□□□ 0.23
VEGFA-226ENST00000611736 STPG4Q8N801 248 aa16.47■□□□□ 0.23
VEGFA-226ENST00000611736 GEMIN7Q9H840 131 aaKnown RBP16.47■□□□□ 0.23
VEGFA-226ENST00000611736 RPL37AP61513 92 aaKnown RBP16.46■□□□□ 0.23
VEGFA-226ENST00000611736 HERVK_113P63121 156 aa16.46■□□□□ 0.23
VEGFA-226ENST00000611736 SEC11AP67812 179 aa16.46■□□□□ 0.23
VEGFA-226ENST00000611736 GAGE2BQ13066 116 aa16.46■□□□□ 0.23
VEGFA-226ENST00000611736 LINC01561Q8N1V8 128 aa16.46■□□□□ 0.23
VEGFA-226ENST00000611736 LINC00474Q9P2X8 69 aa16.46■□□□□ 0.23
VEGFA-226ENST00000611736 A0A096LNJ9 63 aa16.45■□□□□ 0.22
VEGFA-226ENST00000611736 F8WDY8 70 aa16.45■□□□□ 0.22
VEGFA-226ENST00000611736 KRTAP10-4P60372 401 aaPredicted RBP16.45■□□□□ 0.22
VEGFA-226ENST00000611736 KIAA0087Q14695 138 aa16.45■□□□□ 0.22
VEGFA-226ENST00000611736 PMCHL1Q16048 86 aa16.45■□□□□ 0.22
VEGFA-226ENST00000611736 C10orf25Q5T742 122 aa16.45■□□□□ 0.22
VEGFA-226ENST00000611736 MRPL35Q9NZE8 188 aaKnown RBP16.45■□□□□ 0.22
VEGFA-226ENST00000611736 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.44■□□□□ 0.22
VEGFA-226ENST00000611736 PTTG1IPP53801 180 aa16.44■□□□□ 0.22
VEGFA-226ENST00000611736 RAB5BP61020 215 aa16.44■□□□□ 0.22
VEGFA-226ENST00000611736 UNQ6190/PRO20217Q6UXQ8 127 aa16.44■□□□□ 0.22
VEGFA-226ENST00000611736 CDKN2A-AS1Q9UH64 79 aa16.44■□□□□ 0.22
VEGFA-226ENST00000611736 RPL18AQ02543 176 aaKnown RBP16.43■□□□□ 0.22
VEGFA-226ENST00000611736 RNF151Q2KHN1 245 aa16.43■□□□□ 0.22
VEGFA-226ENST00000611736 CST9LQ9H4G1 147 aa16.43■□□□□ 0.22
VEGFA-226ENST00000611736 PKHD1L1Q86WI1 4243 aa16.43■□□□□ 0.22
VEGFA-226ENST00000611736 HBDP02042 147 aa16.42■□□□□ 0.22
VEGFA-226ENST00000611736 PMVKQ15126 192 aa16.42■□□□□ 0.22
VEGFA-226ENST00000611736 LINC00469Q8N7U9 141 aa16.41■□□□□ 0.22
VEGFA-226ENST00000611736 PACRGQ96M98 296 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-226ENST00000611736 TOMM7Q9P0U1 55 aa16.41■□□□□ 0.22
VEGFA-226ENST00000611736 C6orf48Q9UBA6 75 aa16.41■□□□□ 0.22
VEGFA-226ENST00000611736 C2orf82Q6UX34 121 aa16.4■□□□□ 0.22
VEGFA-226ENST00000611736 TINCRA0A1B0GVN0 87 aa16.39■□□□□ 0.21
VEGFA-226ENST00000611736 PRSS2P07478 247 aa16.39■□□□□ 0.21
VEGFA-226ENST00000611736 NDUFA6P56556 154 aa16.38■□□□□ 0.21
VEGFA-226ENST00000611736 DMBT1Q9UGM3 2413 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-226ENST00000611736 C7orf33Q8WU49 177 aa16.37■□□□□ 0.21
VEGFA-226ENST00000611736 TRGC2P03986 189 aa16.36■□□□□ 0.21
VEGFA-226ENST00000611736 PDZD11Q5EBL8 140 aa16.36■□□□□ 0.21
VEGFA-226ENST00000611736 C6orf226Q5I0X4 101 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms