RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CDC42SE2Q9NRR3 84 aa8.28□□□□□ -1.08
CD9-212ENST00000610354 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
CD9-212ENST00000610354 FCER1GP30273 86 aa8.27□□□□□ -1.09
CD9-212ENST00000610354 C14orf177Q52M58 125 aa8.27□□□□□ -1.09
CD9-212ENST00000610354 TMEM136Q6ZRR5 245 aa8.27□□□□□ -1.09
CD9-212ENST00000610354 OR5A1Q8NGJ0 315 aa8.27□□□□□ -1.09
CD9-212ENST00000610354 CHCHD10Q8WYQ3 142 aaPredicted RBP8.27□□□□□ -1.09
CD9-212ENST00000610354 FAM104AQ969W3 186 aa8.27□□□□□ -1.09
CD9-212ENST00000610354 SMIM2Q9BVW6 85 aa8.27□□□□□ -1.09
CD9-212ENST00000610354 GNB1LQ9BYB4 327 aa8.27□□□□□ -1.09
CD9-212ENST00000610354 PPBPP02775 128 aa8.26□□□□□ -1.09
CD9-212ENST00000610354 SMR3BP02814 79 aaPredicted RBP8.26□□□□□ -1.09
CD9-212ENST00000610354 SLPIP03973 132 aa8.26□□□□□ -1.09
CD9-212ENST00000610354 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
CD9-212ENST00000610354 PRELID3AQ96N28 172 aa8.26□□□□□ -1.09
CD9-212ENST00000610354 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
CD9-212ENST00000610354 MRPL18Q9H0U6 180 aaKnown RBP8.26□□□□□ -1.09
CD9-212ENST00000610354 UBE2D4Q9Y2X8 147 aa8.26□□□□□ -1.09
CD9-212ENST00000610354 LINC00959A0A1B0GUT2 108 aa8.25□□□□□ -1.09
CD9-212ENST00000610354 TCAPO15273 167 aa8.25□□□□□ -1.09
CD9-212ENST00000610354 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
CD9-212ENST00000610354 FOXI1Q12951 378 aa8.25□□□□□ -1.09
CD9-212ENST00000610354 ORMDL3Q8N138 153 aa8.25□□□□□ -1.09
CD9-212ENST00000610354 ZNF664Q8N3J9 261 aa8.25□□□□□ -1.09
CD9-212ENST00000610354 TMEM101Q96IK0 257 aa8.25□□□□□ -1.09
CD9-212ENST00000610354 DDTP30046 118 aa8.24□□□□□ -1.09
CD9-212ENST00000610354 RNASE13Q5GAN3 156 aaKnown RBP8.24□□□□□ -1.09
CD9-212ENST00000610354 CSDC2Q9Y534 153 aaKnown RBP8.24□□□□□ -1.09
CD9-212ENST00000610354 DGAT2L7PQ6IED9 249 aa8.23□□□□□ -1.09
CD9-212ENST00000610354 Q6ZUT4 128 aa8.23□□□□□ -1.09
CD9-212ENST00000610354 C9orf163Q8N9P6 203 aa8.23□□□□□ -1.09
CD9-212ENST00000610354 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
CD9-212ENST00000610354 CCL25O15444 150 aa8.22□□□□□ -1.09
CD9-212ENST00000610354 XCL1P47992 114 aa8.22□□□□□ -1.09
CD9-212ENST00000610354 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
CD9-212ENST00000610354 LOC389332A0A1B0GUA5 103 aa8.21□□□□□ -1.1
CD9-212ENST00000610354 hDV102S1A0JD36 115 aa8.21□□□□□ -1.1
CD9-212ENST00000610354 CNBPP62633 177 aaKnown RBP8.21□□□□□ -1.1
CD9-212ENST00000610354 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.1
CD9-212ENST00000610354 EPM2AB3EWF7 344 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 PANO1I0J062 215 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 KIAA1644Q3SXP7 199 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 HIGD2BQ4VC39 106 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 Q5VSD8 79 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 SCXQ7RTU7 201 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 C14orf144Q96I85 54 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 PRO1933Q9H354 126 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 LAMTOR2Q9Y2Q5 125 aa8.2□□□□□ -1.1
CD9-212ENST00000610354 NUPR1O60356 82 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 SERF1AO75920 110 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 LINC00310P59036 64 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 SS18Q15532 418 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 LBHQ53QV2 105 aaPredicted RBP8.19□□□□□ -1.1
CD9-212ENST00000610354 BAGE3Q86Y29 109 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 Q8N8P6 123 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 CHAC1Q9BUX1 264 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 KRTAP9-9Q9BYP9 154 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 KRTAP9-4Q9BYQ2 154 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 MAP1LC3AQ9H492 121 aa8.19□□□□□ -1.1
CD9-212ENST00000610354 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
CD9-212ENST00000610354 SCGB1D1O95968 90 aa8.18□□□□□ -1.1
CD9-212ENST00000610354 CD164L2Q6UWJ8 174 aa8.18□□□□□ -1.1
CD9-212ENST00000610354 CIRBP-AS1Q8TBR5 109 aa8.18□□□□□ -1.1
CD9-212ENST00000610354 SPANXA1Q9NS26 97 aa8.18□□□□□ -1.1
CD9-212ENST00000610354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.18□□□□□ -1.1
CD9-212ENST00000610354 SRRM2Q9UQ35 2752 aaKnown RBP8.17□□□□□ -1.1
CD9-212ENST00000610354 TRAV13-1A0A0B4J241 112 aa8.17□□□□□ -1.1
CD9-212ENST00000610354 MRPS36P82909 103 aaKnown RBP8.17□□□□□ -1.1
CD9-212ENST00000610354 SMAGPQ0VAQ4 97 aa8.17□□□□□ -1.1
CD9-212ENST00000610354 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
CD9-212ENST00000610354 IFI27P40305 119 aaPredicted RBP8.16□□□□□ -1.1
CD9-212ENST00000610354 PKHD1L1Q86WI1 4243 aa8.15□□□□□ -1.1
CD9-212ENST00000610354 IGLV4-3A0A075B6K6 122 aa8.15□□□□□ -1.1
CD9-212ENST00000610354 IGHV1-58A0A0C4DH39 117 aa8.15□□□□□ -1.1
CD9-212ENST00000610354 MALP21145 153 aa8.15□□□□□ -1.1
CD9-212ENST00000610354 TEX43Q6ZNM6 134 aa8.15□□□□□ -1.1
CD9-212ENST00000610354 C2orf88Q9BSF0 95 aa8.15□□□□□ -1.1
CD9-212ENST00000610354 PYGO1Q9Y3Y4 419 aa8.15□□□□□ -1.1
CD9-212ENST00000610354 CIRBPQ14011 172 aaKnown RBP8.14□□□□□ -1.11
CD9-212ENST00000610354 ZC2HC1BQ5TFG8 222 aa8.14□□□□□ -1.11
CD9-212ENST00000610354 C5orf38Q86SI9 138 aa8.14□□□□□ -1.11
CD9-212ENST00000610354 ALKBH7Q9BT30 221 aaPredicted RBP8.14□□□□□ -1.11
CD9-212ENST00000610354 IGHV3-64A0A075B6Q5 118 aa8.13□□□□□ -1.11
CD9-212ENST00000610354 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
CD9-212ENST00000610354 CHTF8P0CG12 524 aa8.13□□□□□ -1.11
CD9-212ENST00000610354 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
CD9-212ENST00000610354 C2orf66Q6UXQ4 117 aa8.13□□□□□ -1.11
CD9-212ENST00000610354 NXT2Q9NPJ8 142 aaKnown RBP8.13□□□□□ -1.11
CD9-212ENST00000610354 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
CD9-212ENST00000610354 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.12□□□□□ -1.11
CD9-212ENST00000610354 COX7A2LO14548 114 aa8.12□□□□□ -1.11
CD9-212ENST00000610354 INAFM2P0DMQ5 153 aa8.12□□□□□ -1.11
CD9-212ENST00000610354 LINC00173Q6ZV60 143 aa8.12□□□□□ -1.11
CD9-212ENST00000610354 PRSS3P2Q8NHM4 247 aa8.12□□□□□ -1.11
CD9-212ENST00000610354 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
CD9-212ENST00000610354 IGHV3OR16-9A0A0B4J2B5 98 aa8.11□□□□□ -1.11
CD9-212ENST00000610354 KRTAP4-8A0A0G2JLE6 195 aa8.11□□□□□ -1.11
CD9-212ENST00000610354 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
CD9-212ENST00000610354 COX6A2Q02221 97 aa8.11□□□□□ -1.11
CD9-212ENST00000610354 ORMDL2Q53FV1 153 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms