RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 C10orf111Q8N326 155 aa1.06□□□□□ -2.24
CCDC144B-206ENST00000609959 C15orf53Q8NAA6 179 aa1.06□□□□□ -2.24
CCDC144B-206ENST00000609959 COX14Q96I36 57 aa1.06□□□□□ -2.24
CCDC144B-206ENST00000609959 LPAR5Q9H1C0 372 aa1.06□□□□□ -2.24
CCDC144B-206ENST00000609959 TENM3Q9P273 2699 aa1.06□□□□□ -2.24
CCDC144B-206ENST00000609959 HECTD4Q9Y4D8 3996 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 A0A0J9YY99 117 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 C3orf85A0A1B0GTC6 90 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 FAM236AA0A1B0GUQ0 79 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 FAM236BA0A1B0GV22 79 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 ZNF670-ZNF695F2Z2N8 137 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 F8W1H4 67 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 SNRNP200O75643 2136 aaKnown RBP1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 PCBD1P61457 104 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 COPZ1P61923 177 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 RRAS2P62070 204 aaPredicted RBP1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 PLGLB1Q02325 96 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 MPV17LQ2QL34 196 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 ATP11AUNQ6ZP68 121 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 ATOH7Q8N100 152 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 SDF2Q99470 211 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 CCL19Q99731 98 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 LINC00470Q9BZP3 86 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 TMEM191AQ9H0A3 160 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 SAR1AQ9NR31 198 aa1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 LSM2Q9Y333 95 aaKnown RBP1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 HUWE1Q7Z6Z7 4374 aaKnown RBP1.05□□□□□ -2.24
CCDC144B-206ENST00000609959 ALMS1Q8TCU4 4167 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 FREM3P0C091 2139 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 CSMD3Q7Z407 3707 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 CADP27708 2225 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 DYNC1H1Q14204 4646 aaKnown RBP1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 PLECQ15149 4684 aaKnown RBP1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 IGHV1-24A0A0C4DH33 117 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 LCE6AA0A183 80 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 K7ERU9 68 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 CDC42EP2O14613 210 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 PIN1P1O15428 100 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 RBP4P02753 201 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 DCDP81605 110 aaKnown RBP1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 EMX2Q04743 252 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 DEFB110Q30KQ9 67 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 LINC00299Q6ZSB3 139 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 ARL11Q969Q4 196 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 SMIM7Q9BQ49 75 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 CDC42SE1Q9NRR8 79 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 SNURFQ9Y675 71 aa1.04□□□□□ -2.24
CCDC144B-206ENST00000609959 HSPG2P98160 4391 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 DNAH10Q8IVF4 4471 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 TRAV2A0A0B4J234 112 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 IGKV3D-7A0A0C4DH55 119 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 IGKV3OR2-268A0A0C4DH90 116 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 A0A0G2JMM0 328 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 A0A1W2PPB8 328 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 A0A1W2PRS3 328 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 KIR3DP1A8MWS1 328 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 H3BRM9 83 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 CCL25O15444 150 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 DLEU1O43261 78 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 EDF1O60869 148 aaKnown RBP1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 CLLU1Q5K131 121 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 SCIMPQ6UWF3 145 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 DEFB106AQ8N104 65 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 TCTEX1D1Q8N7M0 179 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 ATP6V0E2Q8NHE4 81 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 LINC00526Q96FQ7 95 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 C2orf88Q9BSF0 95 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 PKHD1P08F94 4074 aa1.03□□□□□ -2.24
CCDC144B-206ENST00000609959 ALPK2Q86TB3 2170 aa1.03□□□□□ -2.25
CCDC144B-206ENST00000609959 PLCE1Q9P212 2302 aa1.03□□□□□ -2.25
CCDC144B-206ENST00000609959 IGLV3-32A0A0A0MS00 114 aa1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 PITX3O75364 302 aa1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 ADCYAP1P18509 176 aa1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 SNRPFP62306 86 aaKnown RBP1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 LINC00322Q6ZN03 302 aaPredicted RBP1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 C5orf17Q8NAS9 161 aa1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 C10orf105Q8TEF2 133 aa1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 TANC2Q9HCD6 1990 aa1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 CCDC167Q9P0B6 97 aa1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 KMT2AQ03164 3969 aa1.02□□□□□ -2.25
CCDC144B-206ENST00000609959 MED12LQ86YW9 2145 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 EXPH5Q8NEV8 1989 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 LOC107984156A0A0G2JMH3 177 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 A0A1B0GV90 55 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 LINC00587B1AMM8 73 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 K7EIL1 84 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 GEMIN2O14893 280 aaKnown RBP1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 IGF2P01344 180 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 IGHV3-30P01768 117 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 IGHV3-30-5P0DP03 117 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 PYYP10082 97 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 GUCA1AP43080 201 aaPredicted RBP1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 SPINT3P49223 89 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 UBA52P62987 128 aaKnown RBP1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 NEDD8Q15843 81 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 GDF5OSQ5U4N7 250 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 LINC01545Q5VT33 79 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 ARL17AQ8IVW1 177 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 CGREF1Q99674 301 aa1.01□□□□□ -2.25
CCDC144B-206ENST00000609959 TAS2R8Q9NYW2 309 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms