RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 SPTA1P02549 2419 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 IGHV4-30-2A0A087WSY4 118 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 IGHV3-38A0A0C4DH36 116 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 PLA2G1BP04054 148 aaKnown RBP4.52□□□□□ -1.69
HDDC2-205ENST00000608456 HTN1P15515 57 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 LINC00158P58513 81 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 STHQ8IWL8 128 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 C1orf158Q8N1D5 194 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 UBL5Q9BZL1 73 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 Q9UF83 564 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 EYSQ5T1H1 3165 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 PIEZO2Q9H5I5 2752 aa4.52□□□□□ -1.69
HDDC2-205ENST00000608456 LOC110117498A0A087WWA1 95 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 IGHV4-28A0A0C4DH34 117 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 EPM2AB3EWF7 344 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 NDUFC1O43677 76 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 GYPEP15421 78 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 KHDC1LQ5JSQ8 128 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 MRAPQ8TCY5 172 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 Q9HAA7 133 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 RIF1Q5UIP0 2472 aaKnown RBP4.51□□□□□ -1.69
HDDC2-205ENST00000608456 GVINP1Q7Z2Y8 2422 aa4.51□□□□□ -1.69
HDDC2-205ENST00000608456 TRAV7A0A075B6U4 112 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 A0A087WYN8 130 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 LECT2O14960 151 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 PAX4O43316 350 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 ATP5EP56381 51 aaPredicted RBP4.5□□□□□ -1.69
HDDC2-205ENST00000608456 SS18Q15532 418 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 C6orf226Q5I0X4 101 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 Q8N814 137 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 C14orf132Q9NPU4 83 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 CELSR3Q9NYQ7 3312 aa4.5□□□□□ -1.69
HDDC2-205ENST00000608456 A0A096LNT2 108 aa4.49□□□□□ -1.69
HDDC2-205ENST00000608456 A0A0U1RRA0 63 aa4.49□□□□□ -1.69
HDDC2-205ENST00000608456 C19orf84I3L1E1 186 aa4.49□□□□□ -1.69
HDDC2-205ENST00000608456 SLURP1P55000 103 aa4.49□□□□□ -1.69
HDDC2-205ENST00000608456 ODF3L2Q3SX64 289 aa4.49□□□□□ -1.69
HDDC2-205ENST00000608456 KIR2DL5BQ8NHK3 375 aa4.49□□□□□ -1.69
HDDC2-205ENST00000608456 ABCA2Q9BZC7 2435 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 SPTAN1Q13813 2472 aaKnown RBP4.48□□□□□ -1.69
HDDC2-205ENST00000608456 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.48□□□□□ -1.69
HDDC2-205ENST00000608456 LINC00959A0A1B0GUT2 108 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 ERC2-IT1O76042 136 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 CXCL6P80162 114 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 KLKP1Q107X0 134 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 C9orf66Q5T8R8 295 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 C10orf99Q6UWK7 81 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 XCL2Q9UBD3 114 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 SERP1Q9Y6X1 66 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 TTC28Q96AY4 2481 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 SORL1Q92673 2214 aa4.48□□□□□ -1.69
HDDC2-205ENST00000608456 CREBBPQ92793 2442 aa4.47□□□□□ -1.69
HDDC2-205ENST00000608456 IGKV3D-7A0A0C4DH55 119 aa4.47□□□□□ -1.69
HDDC2-205ENST00000608456 TRBV7-6A0A0J9YX20 115 aa4.47□□□□□ -1.69
HDDC2-205ENST00000608456 LOC100131303A0A0U1RQF7 123 aa4.47□□□□□ -1.69
HDDC2-205ENST00000608456 RBM3P98179 157 aaKnown RBP4.47□□□□□ -1.69
HDDC2-205ENST00000608456 Q6ZTI0 123 aa4.47□□□□□ -1.69
HDDC2-205ENST00000608456 C6orf223Q8N319 242 aa4.47□□□□□ -1.69
HDDC2-205ENST00000608456 LINC00612Q8N6U2 182 aa4.47□□□□□ -1.69
HDDC2-205ENST00000608456 HIVEP3Q5T1R4 2406 aa4.47□□□□□ -1.69
HDDC2-205ENST00000608456 ZNF292O60281 2723 aa4.46□□□□□ -1.69
HDDC2-205ENST00000608456 TRGV2A0A075B6R0 118 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 TRGV4A0A0C4DH28 118 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 A0A1B0GW54 56 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 NCR3O14931 201 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 FHL2Q14192 279 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 XP32Q5T750 250 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 LINC00575Q6W349 94 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 C1orf43Q9BWL3 253 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
HDDC2-205ENST00000608456 PLAC8L1A1L4L8 177 aa4.45□□□□□ -1.7
HDDC2-205ENST00000608456 CCL24O00175 119 aa4.45□□□□□ -1.7
HDDC2-205ENST00000608456 GNLYP22749 145 aa4.45□□□□□ -1.7
HDDC2-205ENST00000608456 XCL1P47992 114 aa4.45□□□□□ -1.7
HDDC2-205ENST00000608456 NANOS2P60321 138 aaKnown RBP4.45□□□□□ -1.7
HDDC2-205ENST00000608456 Q6ZQT0 140 aa4.45□□□□□ -1.7
HDDC2-205ENST00000608456 C3orf56Q8N813 242 aa4.45□□□□□ -1.7
HDDC2-205ENST00000608456 NOP10Q9NPE3 64 aaKnown RBP4.45□□□□□ -1.7
HDDC2-205ENST00000608456 FAM30AQ9NZY2 134 aa4.45□□□□□ -1.7
HDDC2-205ENST00000608456 IGLV4-60A0A075B6I1 120 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 SMIM26A0A096LP01 95 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
HDDC2-205ENST00000608456 A0A0J9YWU9 116 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 FAM236DA0A1B0GTK5 79 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 PRM2P04554 102 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 FAM236CP0DP71 79 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 KIAA0087Q14695 138 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
HDDC2-205ENST00000608456 CSNK1G2-AS1Q8NCQ2 148 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 LOC400499M0QZD8 3231 aa4.44□□□□□ -1.7
HDDC2-205ENST00000608456 COL6A3P12111 3177 aa4.43□□□□□ -1.7
HDDC2-205ENST00000608456 GIG44P09565 113 aaPredicted RBP4.43□□□□□ -1.7
HDDC2-205ENST00000608456 IGHV4-31P0DP07 118 aa4.43□□□□□ -1.7
HDDC2-205ENST00000608456 PLA2G2AP14555 144 aa4.43□□□□□ -1.7
HDDC2-205ENST00000608456 PFN2P35080 140 aa4.43□□□□□ -1.7
HDDC2-205ENST00000608456 Q5XG85 94 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms