RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 P0C879 139 aa6.5□□□□□ -1.37
CSMD1-216ENST00000602557 CRIP1P50238 77 aa6.5□□□□□ -1.37
CSMD1-216ENST00000602557 MAP6D1Q9H9H5 199 aa6.5□□□□□ -1.37
CSMD1-216ENST00000602557 ZFAND2AQ8N6M9 145 aa6.5□□□□□ -1.37
CSMD1-216ENST00000602557 LINC01548A6NM66 108 aa6.5□□□□□ -1.37
CSMD1-216ENST00000602557 Q6ZTI0 123 aa6.5□□□□□ -1.37
CSMD1-216ENST00000602557 BEAN1Q3B7T3 259 aa6.5□□□□□ -1.37
CSMD1-216ENST00000602557 Q6ZSV7 163 aa6.49□□□□□ -1.37
CSMD1-216ENST00000602557 SMAD5-AS1Q9Y6J3 95 aa6.49□□□□□ -1.37
CSMD1-216ENST00000602557 Q6ZSR3 168 aa6.49□□□□□ -1.37
CSMD1-216ENST00000602557 A0A096LNI7 61 aa6.49□□□□□ -1.37
CSMD1-216ENST00000602557 MSMPQ1L6U9 139 aa6.49□□□□□ -1.37
CSMD1-216ENST00000602557 REG3AQ06141 175 aa6.49□□□□□ -1.37
CSMD1-216ENST00000602557 A0A1W2PNU3 283 aaPredicted RBP6.49□□□□□ -1.37
CSMD1-216ENST00000602557 TRBV7-6A0A0J9YX20 115 aa6.48□□□□□ -1.37
CSMD1-216ENST00000602557 HILS1P60008 231 aa6.48□□□□□ -1.37
CSMD1-216ENST00000602557 IGF2-ASQ6U949 168 aa6.48□□□□□ -1.37
CSMD1-216ENST00000602557 AKAP13Q12802 2813 aa6.48□□□□□ -1.37
CSMD1-216ENST00000602557 HIGD2AQ9BW72 106 aa6.48□□□□□ -1.37
CSMD1-216ENST00000602557 PRO0255Q9UI72 69 aa6.48□□□□□ -1.37
CSMD1-216ENST00000602557 NRACQ8N912 160 aa6.48□□□□□ -1.37
CSMD1-216ENST00000602557 PRYO14603 147 aa6.48□□□□□ -1.37
CSMD1-216ENST00000602557 Q6ZPA2 131 aa6.47□□□□□ -1.37
CSMD1-216ENST00000602557 SMIM11BQ8TCY0 68 aa6.47□□□□□ -1.37
CSMD1-216ENST00000602557 COL27A1Q8IZC6 1860 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-216ENST00000602557 CHCHD10Q8WYQ3 142 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-216ENST00000602557 WFDC10AQ9H1F0 79 aa6.47□□□□□ -1.37
CSMD1-216ENST00000602557 CRYGDP07320 174 aa6.47□□□□□ -1.37
CSMD1-216ENST00000602557 A0A087WZ39 114 aa6.47□□□□□ -1.37
CSMD1-216ENST00000602557 CRYGAP11844 174 aa6.47□□□□□ -1.37
CSMD1-216ENST00000602557 PRORYQ9H606 182 aa6.47□□□□□ -1.37
CSMD1-216ENST00000602557 MUC22E2RYF6 1773 aaPredicted RBP6.47□□□□□ -1.37
CSMD1-216ENST00000602557 WISP2O76076 250 aa6.46□□□□□ -1.37
CSMD1-216ENST00000602557 FAM19A1Q7Z5A9 133 aa6.46□□□□□ -1.37
CSMD1-216ENST00000602557 PYGO1Q9Y3Y4 419 aa6.46□□□□□ -1.37
CSMD1-216ENST00000602557 FAM222AQ5U5X8 452 aa6.46□□□□□ -1.37
CSMD1-216ENST00000602557 C11orf45Q8TAV5 145 aa6.46□□□□□ -1.37
CSMD1-216ENST00000602557 IGLV2-11P01706 119 aa6.46□□□□□ -1.38
CSMD1-216ENST00000602557 C6orf99Q4VX62 202 aa6.46□□□□□ -1.38
CSMD1-216ENST00000602557 MGAM2Q2M2H8 2515 aa6.46□□□□□ -1.38
CSMD1-216ENST00000602557 TMEM89A2RUT3 159 aa6.46□□□□□ -1.38
CSMD1-216ENST00000602557 ODF3BA8MYP8 253 aa6.46□□□□□ -1.38
CSMD1-216ENST00000602557 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
CSMD1-216ENST00000602557 A6NDX4 124 aa6.46□□□□□ -1.38
CSMD1-216ENST00000602557 BRWD1-AS2P59051 145 aa6.45□□□□□ -1.38
CSMD1-216ENST00000602557 Q6ZQY7 126 aa6.45□□□□□ -1.38
CSMD1-216ENST00000602557 PROK1P58294 105 aa6.45□□□□□ -1.38
CSMD1-216ENST00000602557 DAZAP2Q15038 168 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-216ENST00000602557 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
CSMD1-216ENST00000602557 C9orf85Q96MD7 179 aa6.44□□□□□ -1.38
CSMD1-216ENST00000602557 VPREB1P12018 145 aa6.44□□□□□ -1.38
CSMD1-216ENST00000602557 TSPEAR-AS2P59090 65 aa6.44□□□□□ -1.38
CSMD1-216ENST00000602557 TSHBP01222 138 aa6.44□□□□□ -1.38
CSMD1-216ENST00000602557 UBE2D3P61077 147 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 UBE2D2P62837 147 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 A0A087WYN8 130 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 URB1-AS1Q96HZ7 61 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 ODF3Q96PU9 254 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 TRBV7-7A0A0K0K1E9 115 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 M0QY20 66 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 ZNF843Q8N446 348 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 Q8NA96 180 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 Q8N9L7 120 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 C1orf229Q6ZS94 237 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-216ENST00000602557 LINC00574Q9H8X3 128 aa6.43□□□□□ -1.38
CSMD1-216ENST00000602557 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
CSMD1-216ENST00000602557 Q9UF83 564 aa6.41□□□□□ -1.38
CSMD1-216ENST00000602557 TNFRSF13BO14836 293 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-216ENST00000602557 LMO4P61968 165 aa6.41□□□□□ -1.38
CSMD1-216ENST00000602557 DEFB114Q30KQ6 69 aa6.4□□□□□ -1.38
CSMD1-216ENST00000602557 K7EQG2 157 aa6.4□□□□□ -1.38
CSMD1-216ENST00000602557 PRR9Q5T870 116 aa6.4□□□□□ -1.38
CSMD1-216ENST00000602557 CRIP3Q6Q6R5 217 aa6.4□□□□□ -1.38
CSMD1-216ENST00000602557 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.38
CSMD1-216ENST00000602557 IGKV2D-28P01615 120 aa6.4□□□□□ -1.38
CSMD1-216ENST00000602557 UBE2D1P51668 147 aa6.4□□□□□ -1.38
CSMD1-216ENST00000602557 DEFB131BA0A096LNP1 70 aa6.4□□□□□ -1.38
CSMD1-216ENST00000602557 ZNF73O43830 326 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-216ENST00000602557 LINC00208Q96KT6 92 aa6.4□□□□□ -1.39
CSMD1-216ENST00000602557 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.39□□□□□ -1.39
CSMD1-216ENST00000602557 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
CSMD1-216ENST00000602557 C10orf99Q6UWK7 81 aa6.39□□□□□ -1.39
CSMD1-216ENST00000602557 PCSK5Q92824 1860 aa6.39□□□□□ -1.39
CSMD1-216ENST00000602557 EIF4EBP1Q13541 118 aaPredicted RBP6.39□□□□□ -1.39
CSMD1-216ENST00000602557 ESRGQ1W209 222 aa6.39□□□□□ -1.39
CSMD1-216ENST00000602557 Q8N3U1 123 aa6.39□□□□□ -1.39
CSMD1-216ENST00000602557 Q8N6K4 173 aa6.39□□□□□ -1.39
CSMD1-216ENST00000602557 ADAMTSL4-AS1Q5T5F5 129 aa6.39□□□□□ -1.39
CSMD1-216ENST00000602557 TRBV6-8A0A0A6YYG3 113 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 PCOTHQ58A44 107 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 NTM-AS1Q6ZSK4 140 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 FBXL19-AS1Q494R0 122 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 C11orf21Q9P2W6 132 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 LINC00482Q8N8I6 264 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 SPINK6Q6UWN8 80 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 Q6YL49 198 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 C19orf84I3L1E1 186 aa6.38□□□□□ -1.39
CSMD1-216ENST00000602557 EDN2P20800 178 aa6.37□□□□□ -1.39
CSMD1-216ENST00000602557 LINC00846Q9NV44 126 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms