RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 IGHV1-58A0A0C4DH39 117 aa9.77□□□□□ -0.85
ZNF548-212ENST00000602086 SIVA1O15304 175 aa9.77□□□□□ -0.85
ZNF548-212ENST00000602086 NMUP48645 174 aa9.77□□□□□ -0.85
ZNF548-212ENST00000602086 COX6A2Q02221 97 aa9.77□□□□□ -0.85
ZNF548-212ENST00000602086 LINC00269Q8N2A0 174 aa9.77□□□□□ -0.85
ZNF548-212ENST00000602086 LINC00588Q9Y4M8 146 aa9.77□□□□□ -0.85
ZNF548-212ENST00000602086 TRAV8-4A0A0B4J246 113 aa9.76□□□□□ -0.85
ZNF548-212ENST00000602086 IGLV5-39A0A0G2JS06 123 aa9.76□□□□□ -0.85
ZNF548-212ENST00000602086 K7EP13 123 aa9.76□□□□□ -0.85
ZNF548-212ENST00000602086 EPPK1P58107 5090 aaKnown RBP9.76□□□□□ -0.85
ZNF548-212ENST00000602086 A0A087WZ39 114 aa9.75□□□□□ -0.85
ZNF548-212ENST00000602086 PCP4L1A6NKN8 68 aa9.75□□□□□ -0.85
ZNF548-212ENST00000602086 C3orf84H3BNL1 204 aa9.75□□□□□ -0.85
ZNF548-212ENST00000602086 CASC10Q5T4H9 136 aa9.75□□□□□ -0.85
ZNF548-212ENST00000602086 CD164L2Q6UWJ8 174 aa9.75□□□□□ -0.85
ZNF548-212ENST00000602086 PCP2Q8IVA1 136 aa9.75□□□□□ -0.85
ZNF548-212ENST00000602086 J3QQQ9 107 aa9.74□□□□□ -0.85
ZNF548-212ENST00000602086 MIAQ16674 131 aa9.74□□□□□ -0.85
ZNF548-212ENST00000602086 Q8N3U1 123 aa9.74□□□□□ -0.85
ZNF548-212ENST00000602086 MUC7Q8TAX7 377 aa9.74□□□□□ -0.85
ZNF548-212ENST00000602086 KLK12Q9UKR0 248 aa9.74□□□□□ -0.85
ZNF548-212ENST00000602086 BIRC6Q9NR09 4857 aa9.74□□□□□ -0.85
ZNF548-212ENST00000602086 SMIM1B2RUZ4 78 aa9.73□□□□□ -0.85
ZNF548-212ENST00000602086 IGHV3-30P01768 117 aa9.73□□□□□ -0.85
ZNF548-212ENST00000602086 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
ZNF548-212ENST00000602086 CRPP02741 224 aa9.73□□□□□ -0.85
ZNF548-212ENST00000602086 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
ZNF548-212ENST00000602086 IGHV3-30-5P0DP03 117 aa9.73□□□□□ -0.85
ZNF548-212ENST00000602086 HNRNPA3P51991 378 aaKnown RBP9.73□□□□□ -0.85
ZNF548-212ENST00000602086 ENHOQ6UWT2 76 aa9.73□□□□□ -0.85
ZNF548-212ENST00000602086 HIGD1BQ9P298 99 aa9.73□□□□□ -0.85
ZNF548-212ENST00000602086 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
ZNF548-212ENST00000602086 IGKV3OR2-268A0A0C4DH90 116 aa9.72□□□□□ -0.85
ZNF548-212ENST00000602086 MYMXA0A1B0GTQ4 84 aa9.72□□□□□ -0.85
ZNF548-212ENST00000602086 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
ZNF548-212ENST00000602086 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
ZNF548-212ENST00000602086 CHCHD10Q8WYQ3 142 aaPredicted RBP9.72□□□□□ -0.85
ZNF548-212ENST00000602086 SPINK8P0C7L1 97 aa9.71□□□□□ -0.86
ZNF548-212ENST00000602086 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
ZNF548-212ENST00000602086 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
ZNF548-212ENST00000602086 DNAH7Q8WXX0 4024 aa9.7□□□□□ -0.86
ZNF548-212ENST00000602086 SACSQ9NZJ4 4579 aa9.7□□□□□ -0.86
ZNF548-212ENST00000602086 TRAV8-3A0A0A6YYJ7 113 aa9.7□□□□□ -0.86
ZNF548-212ENST00000602086 TSPEAR-AS2P59090 65 aa9.7□□□□□ -0.86
ZNF548-212ENST00000602086 CLPSL2Q6UWE3 100 aa9.7□□□□□ -0.86
ZNF548-212ENST00000602086 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
ZNF548-212ENST00000602086 ZNF815PA8K554 130 aa9.69□□□□□ -0.86
ZNF548-212ENST00000602086 IBA57-AS1B1ANH7 110 aa9.69□□□□□ -0.86
ZNF548-212ENST00000602086 COX7A2LO14548 114 aa9.69□□□□□ -0.86
ZNF548-212ENST00000602086 XCL1P47992 114 aa9.69□□□□□ -0.86
ZNF548-212ENST00000602086 FOXI1Q12951 378 aa9.69□□□□□ -0.86
ZNF548-212ENST00000602086 UBE2WQ96B02 151 aa9.69□□□□□ -0.86
ZNF548-212ENST00000602086 Q9H8V8 135 aa9.69□□□□□ -0.86
ZNF548-212ENST00000602086 LCE6AA0A183 80 aa9.68□□□□□ -0.86
ZNF548-212ENST00000602086 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
ZNF548-212ENST00000602086 SFTA2Q6UW10 78 aa9.68□□□□□ -0.86
ZNF548-212ENST00000602086 TTTY13Q9BZ97 58 aa9.68□□□□□ -0.86
ZNF548-212ENST00000602086 NDUFA1O15239 70 aa9.67□□□□□ -0.86
ZNF548-212ENST00000602086 C5orf38Q86SI9 138 aa9.67□□□□□ -0.86
ZNF548-212ENST00000602086 NDUFA12Q9UI09 145 aa9.67□□□□□ -0.86
ZNF548-212ENST00000602086 IGHV3-64A0A075B6Q5 118 aa9.66□□□□□ -0.86
ZNF548-212ENST00000602086 CTAG1AP78358 180 aa9.66□□□□□ -0.86
ZNF548-212ENST00000602086 TAL2Q16559 108 aa9.66□□□□□ -0.86
ZNF548-212ENST00000602086 KRTAP26-1Q6PEX3 210 aa9.66□□□□□ -0.86
ZNF548-212ENST00000602086 UBE2DNLQ8IWF7 75 aa9.66□□□□□ -0.86
ZNF548-212ENST00000602086 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
ZNF548-212ENST00000602086 STARD9Q9P2P6 4700 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 IGLV10-54A0A075B6I4 117 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 GAGE12HA6NDE8 117 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 APOMO95445 188 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 HERV-K104P63124 156 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 Q8IZM0 81 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 COX7B2Q8TF08 81 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 RMI2Q96E14 147 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 TP73-AS1Q9UF72 201 aa9.65□□□□□ -0.86
ZNF548-212ENST00000602086 HSD52Q0P140 79 aa9.64□□□□□ -0.87
ZNF548-212ENST00000602086 SCGB1D4Q6XE38 83 aa9.64□□□□□ -0.87
ZNF548-212ENST00000602086 ZNF625Q96I27 306 aaPredicted RBP9.64□□□□□ -0.87
ZNF548-212ENST00000602086 C1orf43Q9BWL3 253 aa9.64□□□□□ -0.87
ZNF548-212ENST00000602086 SPANXB1Q9NS25 103 aaPredicted RBP9.64□□□□□ -0.87
ZNF548-212ENST00000602086 TIMM17BO60830 172 aa9.63□□□□□ -0.87
ZNF548-212ENST00000602086 MALP21145 153 aa9.63□□□□□ -0.87
ZNF548-212ENST00000602086 COX11Q9Y6N1 276 aa9.63□□□□□ -0.87
ZNF548-212ENST00000602086 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
ZNF548-212ENST00000602086 M0R143 59 aa9.62□□□□□ -0.87
ZNF548-212ENST00000602086 CXCL5P42830 114 aa9.62□□□□□ -0.87
ZNF548-212ENST00000602086 LYSTQ99698 3801 aa9.62□□□□□ -0.87
ZNF548-212ENST00000602086 KIAA0087Q14695 138 aa9.61□□□□□ -0.87
ZNF548-212ENST00000602086 TTC32Q5I0X7 151 aa9.61□□□□□ -0.87
ZNF548-212ENST00000602086 Q6ZVH6 145 aa9.61□□□□□ -0.87
ZNF548-212ENST00000602086 CSMD3Q7Z407 3707 aa9.61□□□□□ -0.87
ZNF548-212ENST00000602086 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
ZNF548-212ENST00000602086 PRSS2P07478 247 aa9.6□□□□□ -0.87
ZNF548-212ENST00000602086 ORAOV1Q8WV07 137 aa9.6□□□□□ -0.87
ZNF548-212ENST00000602086 PLECQ15149 4684 aaKnown RBP9.59□□□□□ -0.87
ZNF548-212ENST00000602086 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
ZNF548-212ENST00000602086 F8WDY8 70 aa9.59□□□□□ -0.87
ZNF548-212ENST00000602086 LBHQ53QV2 105 aaPredicted RBP9.59□□□□□ -0.87
ZNF548-212ENST00000602086 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
ZNF548-212ENST00000602086 TM2D2Q9BX73 214 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms