RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 VCYO14598 125 aa9.29□□□□□ -0.92
SSBP4-211ENST00000601614 KRTAP13-2Q52LG2 175 aa9.29□□□□□ -0.92
SSBP4-211ENST00000601614 TIMM21Q9BVV7 248 aa9.29□□□□□ -0.92
SSBP4-211ENST00000601614 CTDSP1Q9GZU7 261 aa9.29□□□□□ -0.92
SSBP4-211ENST00000601614 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
SSBP4-211ENST00000601614 KANTRA0A1W2PQU2 76 aa9.28□□□□□ -0.92
SSBP4-211ENST00000601614 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
SSBP4-211ENST00000601614 CRYGAP11844 174 aa9.28□□□□□ -0.92
SSBP4-211ENST00000601614 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
SSBP4-211ENST00000601614 NRACQ8N912 160 aa9.28□□□□□ -0.92
SSBP4-211ENST00000601614 RPL39P62891 51 aaKnown RBP9.27□□□□□ -0.93
SSBP4-211ENST00000601614 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
SSBP4-211ENST00000601614 A8MWL6 223 aa9.26□□□□□ -0.93
SSBP4-211ENST00000601614 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
SSBP4-211ENST00000601614 NUPR1O60356 82 aa9.26□□□□□ -0.93
SSBP4-211ENST00000601614 SUMO2P61956 95 aaKnown RBP9.26□□□□□ -0.93
SSBP4-211ENST00000601614 SMAGPQ0VAQ4 97 aa9.26□□□□□ -0.93
SSBP4-211ENST00000601614 HMSDA8MTL9 139 aa9.25□□□□□ -0.93
SSBP4-211ENST00000601614 C22orf24Q9Y442 160 aa9.25□□□□□ -0.93
SSBP4-211ENST00000601614 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
SSBP4-211ENST00000601614 A0A1B0GUT8 65 aa9.24□□□□□ -0.93
SSBP4-211ENST00000601614 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
SSBP4-211ENST00000601614 KIR2DL4Q99706 377 aa9.24□□□□□ -0.93
SSBP4-211ENST00000601614 KRTAP4-1Q9BYQ7 146 aa9.23□□□□□ -0.93
SSBP4-211ENST00000601614 HIGD1CA8MV81 97 aa9.22□□□□□ -0.93
SSBP4-211ENST00000601614 TEX46H3BTG2 121 aa9.22□□□□□ -0.93
SSBP4-211ENST00000601614 CT83Q5H943 113 aa9.22□□□□□ -0.93
SSBP4-211ENST00000601614 LINC00242Q5T6M2 205 aa9.22□□□□□ -0.93
SSBP4-211ENST00000601614 LINC00173Q6ZV60 143 aa9.22□□□□□ -0.93
SSBP4-211ENST00000601614 LINC00469Q8N7U9 141 aa9.22□□□□□ -0.93
SSBP4-211ENST00000601614 LINC00304Q8N9R0 145 aa9.22□□□□□ -0.93
SSBP4-211ENST00000601614 BORCS7Q96B45 105 aa9.22□□□□□ -0.93
SSBP4-211ENST00000601614 IFITM10A6NMD0 228 aa9.21□□□□□ -0.94
SSBP4-211ENST00000601614 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
SSBP4-211ENST00000601614 LINC01547P58512 204 aaPredicted RBP9.21□□□□□ -0.94
SSBP4-211ENST00000601614 TMEM18Q96B42 140 aa9.21□□□□□ -0.94
SSBP4-211ENST00000601614 BCE1O60756 84 aa9.2□□□□□ -0.94
SSBP4-211ENST00000601614 MRPS36P82909 103 aaKnown RBP9.2□□□□□ -0.94
SSBP4-211ENST00000601614 HBBP68871 147 aa9.19□□□□□ -0.94
SSBP4-211ENST00000601614 PACRGQ96M98 296 aaPredicted RBP9.19□□□□□ -0.94
SSBP4-211ENST00000601614 PPDPFQ9H3Y8 114 aa9.19□□□□□ -0.94
SSBP4-211ENST00000601614 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
SSBP4-211ENST00000601614 TGIF2-C20orf24A0A0A6YYL0 155 aa9.18□□□□□ -0.94
SSBP4-211ENST00000601614 MRPL51Q4U2R6 128 aaKnown RBP9.18□□□□□ -0.94
SSBP4-211ENST00000601614 SPANXA1Q9NS26 97 aa9.18□□□□□ -0.94
SSBP4-211ENST00000601614 ZNF727A8MUV8 499 aa9.17□□□□□ -0.94
SSBP4-211ENST00000601614 PPP1R2P9O14990 202 aa9.17□□□□□ -0.94
SSBP4-211ENST00000601614 PPP1R17O96001 155 aa9.17□□□□□ -0.94
SSBP4-211ENST00000601614 SRSF3P84103 164 aaKnown RBP9.17□□□□□ -0.94
SSBP4-211ENST00000601614 LBHQ53QV2 105 aaPredicted RBP9.16□□□□□ -0.94
SSBP4-211ENST00000601614 MRPL55Q7Z7F7 128 aaKnown RBP9.16□□□□□ -0.94
SSBP4-211ENST00000601614 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
SSBP4-211ENST00000601614 TAGLN2P37802 199 aaKnown RBP9.15□□□□□ -0.94
SSBP4-211ENST00000601614 RPL37AP8A6NKH3 93 aa9.14□□□□□ -0.95
SSBP4-211ENST00000601614 RPL32P62910 135 aaKnown RBP9.14□□□□□ -0.95
SSBP4-211ENST00000601614 FAM229BQ4G0N7 80 aa9.14□□□□□ -0.95
SSBP4-211ENST00000601614 C20orf78Q9BR46 151 aa9.14□□□□□ -0.95
SSBP4-211ENST00000601614 TP73-AS1Q9UF72 201 aa9.14□□□□□ -0.95
SSBP4-211ENST00000601614 TRBV24-1A0A075B6N3 115 aa9.13□□□□□ -0.95
SSBP4-211ENST00000601614 TCAPO15273 167 aa9.13□□□□□ -0.95
SSBP4-211ENST00000601614 RIGQ13278 110 aa9.13□□□□□ -0.95
SSBP4-211ENST00000601614 ASB16-AS1Q495Z4 193 aa9.13□□□□□ -0.95
SSBP4-211ENST00000601614 FAM104BQ5XKR9 115 aa9.13□□□□□ -0.95
SSBP4-211ENST00000601614 LINC00167Q96N53 147 aa9.13□□□□□ -0.95
SSBP4-211ENST00000601614 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
SSBP4-211ENST00000601614 TMEM250H0YL14 139 aa9.12□□□□□ -0.95
SSBP4-211ENST00000601614 IGLV4-3A0A075B6K6 122 aa9.11□□□□□ -0.95
SSBP4-211ENST00000601614 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
SSBP4-211ENST00000601614 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
SSBP4-211ENST00000601614 V9GYV3 84 aa9.11□□□□□ -0.95
SSBP4-211ENST00000601614 CEBPGP53567 150 aa9.1□□□□□ -0.95
SSBP4-211ENST00000601614 ZC2HC1BQ5TFG8 222 aa9.1□□□□□ -0.95
SSBP4-211ENST00000601614 LINC01561Q8N1V8 128 aa9.1□□□□□ -0.95
SSBP4-211ENST00000601614 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
SSBP4-211ENST00000601614 TOMM7Q9P0U1 55 aa9.1□□□□□ -0.95
SSBP4-211ENST00000601614 IGKV2D-26A0A0A0MRZ7 120 aa9.09□□□□□ -0.95
SSBP4-211ENST00000601614 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
SSBP4-211ENST00000601614 GAGE10A6NGK3 116 aa9.09□□□□□ -0.95
SSBP4-211ENST00000601614 NPYP01303 97 aa9.09□□□□□ -0.95
SSBP4-211ENST00000601614 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
SSBP4-211ENST00000601614 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
SSBP4-211ENST00000601614 CKS2P33552 79 aa9.08□□□□□ -0.96
SSBP4-211ENST00000601614 CTAG1AP78358 180 aa9.08□□□□□ -0.96
SSBP4-211ENST00000601614 C3orf22Q8N5N4 141 aa9.08□□□□□ -0.96
SSBP4-211ENST00000601614 PRSS2P07478 247 aa9.07□□□□□ -0.96
SSBP4-211ENST00000601614 IFI27P40305 119 aaPredicted RBP9.07□□□□□ -0.96
SSBP4-211ENST00000601614 UBE2AP49459 152 aa9.07□□□□□ -0.96
SSBP4-211ENST00000601614 CKS1BP61024 79 aa9.07□□□□□ -0.96
SSBP4-211ENST00000601614 TCTE3Q8IZS6 198 aa9.07□□□□□ -0.96
SSBP4-211ENST00000601614 PYGO1Q9Y3Y4 419 aa9.07□□□□□ -0.96
SSBP4-211ENST00000601614 D6R8Y8 96 aa9.06□□□□□ -0.96
SSBP4-211ENST00000601614 C6orf226Q5I0X4 101 aa9.06□□□□□ -0.96
SSBP4-211ENST00000601614 Q8IZM0 81 aa9.06□□□□□ -0.96
SSBP4-211ENST00000601614 TMEM141Q96I45 108 aa9.06□□□□□ -0.96
SSBP4-211ENST00000601614 SMIM7Q9BQ49 75 aa9.06□□□□□ -0.96
SSBP4-211ENST00000601614 Q6ZN92 141 aa9.05□□□□□ -0.96
SSBP4-211ENST00000601614 EIF5A2Q9GZV4 153 aaKnown RBP9.05□□□□□ -0.96
SSBP4-211ENST00000601614 PNRC1Q12796 327 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-211ENST00000601614 LINC00337Q8N6G1 96 aa9.04□□□□□ -0.96
SSBP4-211ENST00000601614 ALKBH7Q9BT30 221 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms