RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 MEF2BQ02080 365 aaPredicted RBP3.89□□□□□ -1.79
LINC00343-209ENST00000601607 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 OR10AG1Q8NH19 301 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 CYTL1Q9NRR1 136 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 ARL2-SNX15V9GYD0 113 aa3.89□□□□□ -1.79
LINC00343-209ENST00000601607 MUC21A0A140T8X8 626 aa3.88□□□□□ -1.79
LINC00343-209ENST00000601607 APOMO95445 188 aa3.88□□□□□ -1.79
LINC00343-209ENST00000601607 RPL12P30050 165 aaKnown RBP3.88□□□□□ -1.79
LINC00343-209ENST00000601607 EIF5AL1Q6IS14 154 aaKnown RBP3.88□□□□□ -1.79
LINC00343-209ENST00000601607 EPDR1Q9UM22 224 aa3.88□□□□□ -1.79
LINC00343-209ENST00000601607 HSPB11Q9Y547 144 aa3.88□□□□□ -1.79
LINC00343-209ENST00000601607 IGLV4-69A0A075B6H9 119 aa3.87□□□□□ -1.79
LINC00343-209ENST00000601607 ARL14EPLP0DKL9 152 aa3.87□□□□□ -1.79
LINC00343-209ENST00000601607 NKX2-5P52952 324 aaPredicted RBP3.87□□□□□ -1.79
LINC00343-209ENST00000601607 SSTP61278 116 aa3.87□□□□□ -1.79
LINC00343-209ENST00000601607 FAM19A5Q7Z5A7 132 aaPredicted RBP3.87□□□□□ -1.79
LINC00343-209ENST00000601607 Q86TA4 180 aa3.87□□□□□ -1.79
LINC00343-209ENST00000601607 SLC51BQ86UW2 128 aa3.87□□□□□ -1.79
LINC00343-209ENST00000601607 NUP35Q8NFH5 326 aa3.87□□□□□ -1.79
LINC00343-209ENST00000601607 TSKUQ8WUA8 353 aa3.87□□□□□ -1.79
LINC00343-209ENST00000601607 ZNF471Q9BX82 626 aaPredicted RBP3.87□□□□□ -1.79
LINC00343-209ENST00000601607 M0QY20 66 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 CCL25O15444 150 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 ZNF861PO60384 105 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 HERV-K104P63124 156 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 UBE2BP63146 152 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 IFITM2Q01629 132 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 LINC00304Q8N9R0 145 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 OR5A1Q8NGJ0 315 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 ISOC2Q96AB3 205 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 PSMG3Q9BT73 122 aaPredicted RBP3.86□□□□□ -1.79
LINC00343-209ENST00000601607 WFDC1Q9HC57 220 aa3.86□□□□□ -1.79
LINC00343-209ENST00000601607 FXYD6-FXYD2A0A087WZ82 144 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 A0A1W2PPV4 95 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 SMLR1H3BR10 107 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 ARPC5O15511 151 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 SERF2P84101 59 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 AMMECR1LQ6DCA0 310 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 RNASEKQ6P5S7 137 aaKnown RBP3.85□□□□□ -1.79
LINC00343-209ENST00000601607 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
LINC00343-209ENST00000601607 LINC00337Q8N6G1 96 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 PGLYRP4Q96LB8 373 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 CAMK2N2Q96S95 79 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 MED9Q9NWA0 146 aa3.85□□□□□ -1.79
LINC00343-209ENST00000601607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.84□□□□□ -1.79
LINC00343-209ENST00000601607 IGKV2-29A2NJV5 120 aaPredicted RBP3.84□□□□□ -1.79
LINC00343-209ENST00000601607 M0QXV9 152 aa3.84□□□□□ -1.79
LINC00343-209ENST00000601607 MGPP08493 103 aa3.84□□□□□ -1.79
LINC00343-209ENST00000601607 SMIM17P0DL12 118 aa3.84□□□□□ -1.79
LINC00343-209ENST00000601607 GCHFRP30047 84 aa3.84□□□□□ -1.79
LINC00343-209ENST00000601607 COTL1Q14019 142 aa3.84□□□□□ -1.79
LINC00343-209ENST00000601607 KRTAP13-2Q52LG2 175 aa3.84□□□□□ -1.79
LINC00343-209ENST00000601607 SPANXN1Q5VSR9 72 aa3.84□□□□□ -1.79
LINC00343-209ENST00000601607 TEX261Q6UWH6 196 aa3.84□□□□□ -1.79
LINC00343-209ENST00000601607 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
LINC00343-209ENST00000601607 LINC00959A0A1B0GUT2 108 aa3.83□□□□□ -1.8
LINC00343-209ENST00000601607 UMAD1C9J7I0 102 aa3.83□□□□□ -1.8
LINC00343-209ENST00000601607 RPL7L1Q6DKI1 246 aaKnown RBP3.83□□□□□ -1.8
LINC00343-209ENST00000601607 AP1S3Q96PC3 154 aa3.83□□□□□ -1.8
LINC00343-209ENST00000601607 BORCS7-ASMTA0A0B4J1R7 106 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 KANTRA0A1W2PQU2 76 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 C19orf71A6NCJ1 209 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 M0R2T5 61 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 PEX7O00628 323 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 SNAI2O43623 268 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 STAG3L2P0CL84 134 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 STAG3L3P0CL85 134 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 CDC34P49427 236 aaPredicted RBP3.82□□□□□ -1.8
LINC00343-209ENST00000601607 RASL11AQ6T310 242 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 SCGB1C1Q8TD33 95 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 MBD3L1Q8WWY6 194 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 SMIM3Q9BZL3 60 aa3.82□□□□□ -1.8
LINC00343-209ENST00000601607 MBP02144 154 aa3.81□□□□□ -1.8
LINC00343-209ENST00000601607 OR5AL1P0C617 328 aa3.81□□□□□ -1.8
LINC00343-209ENST00000601607 ATP6V0CP27449 155 aa3.81□□□□□ -1.8
LINC00343-209ENST00000601607 CLLU1Q5K131 121 aa3.81□□□□□ -1.8
LINC00343-209ENST00000601607 KIR2DL4Q99706 377 aa3.81□□□□□ -1.8
LINC00343-209ENST00000601607 ZFP30Q9Y2G7 519 aa3.81□□□□□ -1.8
LINC00343-209ENST00000601607 LINC00862A6NCI5 91 aa3.8□□□□□ -1.8
LINC00343-209ENST00000601607 ESDP10768 282 aa3.8□□□□□ -1.8
LINC00343-209ENST00000601607 CEND1Q8N111 149 aa3.8□□□□□ -1.8
LINC00343-209ENST00000601607 SMDT1Q9H4I9 107 aa3.8□□□□□ -1.8
LINC00343-209ENST00000601607 NIT2Q9NQR4 276 aa3.8□□□□□ -1.8
LINC00343-209ENST00000601607 TMEM167BQ9NRX6 74 aa3.8□□□□□ -1.8
LINC00343-209ENST00000601607 A0A1W2PRE2 83 aa3.79□□□□□ -1.8
LINC00343-209ENST00000601607 COX7A2LO14548 114 aa3.79□□□□□ -1.8
LINC00343-209ENST00000601607 CXCL1P09341 107 aa3.79□□□□□ -1.8
LINC00343-209ENST00000601607 NTF3P20783 257 aa3.79□□□□□ -1.8
LINC00343-209ENST00000601607 UBE2G2P60604 165 aa3.79□□□□□ -1.8
LINC00343-209ENST00000601607 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
LINC00343-209ENST00000601607 SS18Q15532 418 aa3.79□□□□□ -1.8
LINC00343-209ENST00000601607 ZNF726P1Q15940 193 aa3.79□□□□□ -1.8
LINC00343-209ENST00000601607 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
LINC00343-209ENST00000601607 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 CTXND1A0A1B0GTU2 59 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 RAB19A4D1S5 217 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 CXorf1O96002 111 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 LTAP01374 205 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 APCSP02743 223 aa3.78□□□□□ -1.8
LINC00343-209ENST00000601607 ZNF25P17030 456 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms