RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 CHAC1Q9BUX1 264 aa8.25□□□□□ -1.09
USE1-209ENST00000601592 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
USE1-209ENST00000601592 APOMO95445 188 aa8.24□□□□□ -1.09
USE1-209ENST00000601592 CBLN2Q8IUK8 224 aa8.24□□□□□ -1.09
USE1-209ENST00000601592 CARD19Q96LW7 228 aa8.24□□□□□ -1.09
USE1-209ENST00000601592 VCX2Q9H322 139 aa8.24□□□□□ -1.09
USE1-209ENST00000601592 SPAG11BQ08648 103 aa8.23□□□□□ -1.09
USE1-209ENST00000601592 SDIM1Q6ZPB5 146 aa8.23□□□□□ -1.09
USE1-209ENST00000601592 CIRBP-AS1Q8TBR5 109 aa8.23□□□□□ -1.09
USE1-209ENST00000601592 TOMM6Q96B49 74 aa8.23□□□□□ -1.09
USE1-209ENST00000601592 DPH3Q96FX2 82 aa8.23□□□□□ -1.09
USE1-209ENST00000601592 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
USE1-209ENST00000601592 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
USE1-209ENST00000601592 IGLV4-69A0A075B6H9 119 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 IGHV3OR16-9A0A0B4J2B5 98 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 IGIPA6NJ69 53 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 CHTF8P0CG12 524 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 UBE2D1P51668 147 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 COX6A2Q02221 97 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 SYCNQ0VAF6 134 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 LINC00173Q6ZV60 143 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 LINC00528Q8N1L1 170 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 ORAOV1Q8WV07 137 aa8.22□□□□□ -1.09
USE1-209ENST00000601592 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
USE1-209ENST00000601592 PANO1I0J062 215 aa8.21□□□□□ -1.1
USE1-209ENST00000601592 LINC00242Q5T6M2 205 aa8.21□□□□□ -1.1
USE1-209ENST00000601592 C18orf32Q8TCD1 76 aa8.21□□□□□ -1.1
USE1-209ENST00000601592 YPEL4Q96NS1 127 aa8.21□□□□□ -1.1
USE1-209ENST00000601592 CAMK2N2Q96S95 79 aa8.21□□□□□ -1.1
USE1-209ENST00000601592 AMELXQ99217 191 aa8.21□□□□□ -1.1
USE1-209ENST00000601592 TIMM17AQ99595 171 aa8.21□□□□□ -1.1
USE1-209ENST00000601592 LINC01546A6NGU7 62 aa8.2□□□□□ -1.1
USE1-209ENST00000601592 NPSP0C0P6 89 aa8.2□□□□□ -1.1
USE1-209ENST00000601592 ERASQ7Z444 233 aa8.2□□□□□ -1.1
USE1-209ENST00000601592 LINC01549A6NIU2 74 aa8.19□□□□□ -1.1
USE1-209ENST00000601592 Q6ZRU5 148 aa8.19□□□□□ -1.1
USE1-209ENST00000601592 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
USE1-209ENST00000601592 FAT1Q14517 4588 aa8.19□□□□□ -1.1
USE1-209ENST00000601592 A0A087WZ39 114 aa8.18□□□□□ -1.1
USE1-209ENST00000601592 LINC00614P0C842 121 aa8.18□□□□□ -1.1
USE1-209ENST00000601592 MAJINQ3KP22 176 aa8.18□□□□□ -1.1
USE1-209ENST00000601592 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
USE1-209ENST00000601592 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
USE1-209ENST00000601592 A0A096LNI7 61 aa8.17□□□□□ -1.1
USE1-209ENST00000601592 PLA2G1BP04054 148 aaKnown RBP8.17□□□□□ -1.1
USE1-209ENST00000601592 RAB5BP61020 215 aa8.17□□□□□ -1.1
USE1-209ENST00000601592 PMCHL1Q16048 86 aa8.17□□□□□ -1.1
USE1-209ENST00000601592 SPACA4Q8TDM5 124 aa8.17□□□□□ -1.1
USE1-209ENST00000601592 C2orf48Q96LS8 159 aa8.17□□□□□ -1.1
USE1-209ENST00000601592 A0A087WYN8 130 aa8.16□□□□□ -1.1
USE1-209ENST00000601592 A0A0J9YXV3 536 aa8.16□□□□□ -1.1
USE1-209ENST00000601592 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.16□□□□□ -1.1
USE1-209ENST00000601592 HBDP02042 147 aa8.16□□□□□ -1.1
USE1-209ENST00000601592 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
USE1-209ENST00000601592 HERVK_113P63121 156 aa8.16□□□□□ -1.1
USE1-209ENST00000601592 SEC11AP67812 179 aa8.16□□□□□ -1.1
USE1-209ENST00000601592 URB1-AS1Q96HZ7 61 aa8.16□□□□□ -1.1
USE1-209ENST00000601592 PACRGQ96M98 296 aaPredicted RBP8.16□□□□□ -1.1
USE1-209ENST00000601592 LOC107984640A0A0U1RRK4 108 aa8.15□□□□□ -1.1
USE1-209ENST00000601592 NDUFA1O15239 70 aa8.15□□□□□ -1.1
USE1-209ENST00000601592 NDUFA6P56556 154 aa8.15□□□□□ -1.1
USE1-209ENST00000601592 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.1
USE1-209ENST00000601592 GAGE2BQ13066 116 aa8.15□□□□□ -1.1
USE1-209ENST00000601592 CIRBPQ14011 172 aaKnown RBP8.15□□□□□ -1.1
USE1-209ENST00000601592 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
USE1-209ENST00000601592 PRSS2P07478 247 aa8.14□□□□□ -1.11
USE1-209ENST00000601592 PMVKQ15126 192 aa8.14□□□□□ -1.11
USE1-209ENST00000601592 LINC00469Q8N7U9 141 aa8.14□□□□□ -1.11
USE1-209ENST00000601592 STPG4Q8N801 248 aa8.14□□□□□ -1.11
USE1-209ENST00000601592 CDKN2A-AS1Q9UH64 79 aa8.14□□□□□ -1.11
USE1-209ENST00000601592 PCLOQ9Y6V0 5065 aa8.14□□□□□ -1.11
USE1-209ENST00000601592 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
USE1-209ENST00000601592 A0A096LNJ9 63 aa8.13□□□□□ -1.11
USE1-209ENST00000601592 TRGC2P03986 189 aa8.13□□□□□ -1.11
USE1-209ENST00000601592 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
USE1-209ENST00000601592 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
USE1-209ENST00000601592 LINC01561Q8N1V8 128 aa8.13□□□□□ -1.11
USE1-209ENST00000601592 CST9LQ9H4G1 147 aa8.13□□□□□ -1.11
USE1-209ENST00000601592 LINC00474Q9P2X8 69 aa8.13□□□□□ -1.11
USE1-209ENST00000601592 F8WDY8 70 aa8.12□□□□□ -1.11
USE1-209ENST00000601592 C10orf25Q5T742 122 aa8.12□□□□□ -1.11
USE1-209ENST00000601592 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
USE1-209ENST00000601592 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
USE1-209ENST00000601592 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
USE1-209ENST00000601592 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
USE1-209ENST00000601592 SRRM2Q9UQ35 2752 aaKnown RBP8.11□□□□□ -1.11
USE1-209ENST00000601592 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
USE1-209ENST00000601592 ATP5LO75964 103 aa8.11□□□□□ -1.11
USE1-209ENST00000601592 PTTG1IPP53801 180 aa8.11□□□□□ -1.11
USE1-209ENST00000601592 CKS1BP61024 79 aa8.11□□□□□ -1.11
USE1-209ENST00000601592 KIAA0087Q14695 138 aa8.11□□□□□ -1.11
USE1-209ENST00000601592 CHCHD1Q96BP2 118 aaKnown RBP8.11□□□□□ -1.11
USE1-209ENST00000601592 PLAC8Q9NZF1 115 aa8.11□□□□□ -1.11
USE1-209ENST00000601592 VPS13BQ7Z7G8 4022 aa8.1□□□□□ -1.11
USE1-209ENST00000601592 HSBP1O75506 76 aa8.1□□□□□ -1.11
USE1-209ENST00000601592 SCO1O75880 301 aa8.1□□□□□ -1.11
USE1-209ENST00000601592 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
USE1-209ENST00000601592 PDZD11Q5EBL8 140 aa8.1□□□□□ -1.11
USE1-209ENST00000601592 C6orf226Q5I0X4 101 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms