RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935		K7EN84	100 aa		6.3	□□□□□ -1.4
NUP62-222	ENST00000600935	ARPC5	O15511	151 aa		6.3	□□□□□ -1.4
NUP62-222	ENST00000600935	SMIM15	Q7Z3B0	74 aa		6.3	□□□□□ -1.4
NUP62-222	ENST00000600935	C22orf24	Q9Y442	160 aa		6.3	□□□□□ -1.4
NUP62-222	ENST00000600935	KRTAP9-7	A8MTY7	169 aa		6.29	□□□□□ -1.4
NUP62-222	ENST00000600935	RPL28	P46779	137 aa	Known RBP	6.29	□□□□□ -1.4
NUP62-222	ENST00000600935	KRTAP19-2	Q3LHN2	52 aa		6.29	□□□□□ -1.4
NUP62-222	ENST00000600935	C2orf82	Q6UX34	121 aa		6.29	□□□□□ -1.4
NUP62-222	ENST00000600935	TIMM21	Q9BVV7	248 aa		6.29	□□□□□ -1.4
NUP62-222	ENST00000600935	BIN3	Q9NQY0	253 aa		6.29	□□□□□ -1.4
NUP62-222	ENST00000600935	TRBV30	A0A0K0K1B3	111 aa		6.28	□□□□□ -1.4
NUP62-222	ENST00000600935	BCE1	O60756	84 aa		6.28	□□□□□ -1.4
NUP62-222	ENST00000600935	KRTAP13-3	Q3SY46	172 aa		6.28	□□□□□ -1.4
NUP62-222	ENST00000600935	KRTAP13-1	Q8IUC0	172 aa		6.28	□□□□□ -1.4
NUP62-222	ENST00000600935	SMKR1	H3BMG3	65 aa		6.27	□□□□□ -1.41
NUP62-222	ENST00000600935	RAB4A	P20338	218 aa		6.27	□□□□□ -1.41
NUP62-222	ENST00000600935	FCER1G	P30273	86 aa		6.27	□□□□□ -1.41
NUP62-222	ENST00000600935	CTAG1A	P78358	180 aa		6.27	□□□□□ -1.41
NUP62-222	ENST00000600935	FAM229B	Q4G0N7	80 aa		6.27	□□□□□ -1.41
NUP62-222	ENST00000600935	VCY	O14598	125 aa		6.26	□□□□□ -1.41
NUP62-222	ENST00000600935	RPL39	P62891	51 aa	Known RBP	6.26	□□□□□ -1.41
NUP62-222	ENST00000600935	MT1H	P80294	61 aa		6.26	□□□□□ -1.41
NUP62-222	ENST00000600935	SMAGP	Q0VAQ4	97 aa		6.26	□□□□□ -1.41
NUP62-222	ENST00000600935	NRAC	Q8N912	160 aa		6.26	□□□□□ -1.41
NUP62-222	ENST00000600935	TMEM191A	Q9H0A3	160 aa		6.26	□□□□□ -1.41
NUP62-222	ENST00000600935	MED9	Q9NWA0	146 aa		6.26	□□□□□ -1.41
NUP62-222	ENST00000600935	PDE6D	O43924	150 aa		6.25	□□□□□ -1.41
NUP62-222	ENST00000600935	AMN1	Q8IY45	258 aa		6.25	□□□□□ -1.41
NUP62-222	ENST00000600935	LINC00469	Q8N7U9	141 aa		6.25	□□□□□ -1.41
NUP62-222	ENST00000600935	OCC1	Q8TAD7	63 aa		6.25	□□□□□ -1.41
NUP62-222	ENST00000600935	KRTAP3-3	Q9BYR6	98 aa		6.25	□□□□□ -1.41
NUP62-222	ENST00000600935	KRTAP3-2	Q9BYR7	98 aa		6.25	□□□□□ -1.41
NUP62-222	ENST00000600935	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.24	□□□□□ -1.41
NUP62-222	ENST00000600935	LOR	P23490	312 aa	Predicted RBP	6.24	□□□□□ -1.41
NUP62-222	ENST00000600935	SUMO2	P61956	95 aa	Known RBP	6.24	□□□□□ -1.41
NUP62-222	ENST00000600935	LBH	Q53QV2	105 aa	Predicted RBP	6.24	□□□□□ -1.41
NUP62-222	ENST00000600935	PACRG	Q96M98	296 aa	Predicted RBP	6.24	□□□□□ -1.41
NUP62-222	ENST00000600935	XAGE1A	Q9HD64	81 aa		6.24	□□□□□ -1.41
NUP62-222	ENST00000600935	TP73-AS1	Q9UF72	201 aa		6.24	□□□□□ -1.41
NUP62-222	ENST00000600935	FLG	P20930	4061 aa	Predicted RBP	6.23	□□□□□ -1.41
NUP62-222	ENST00000600935	SMLR1	H3BR10	107 aa		6.23	□□□□□ -1.41
NUP62-222	ENST00000600935	ZNF345	Q14585	488 aa		6.23	□□□□□ -1.41
NUP62-222	ENST00000600935	MRPL55	Q7Z7F7	128 aa	Known RBP	6.23	□□□□□ -1.41
NUP62-222	ENST00000600935	IFITM10	A6NMD0	228 aa		6.22	□□□□□ -1.41
NUP62-222	ENST00000600935	ZNF727	A8MUV8	499 aa		6.22	□□□□□ -1.41
NUP62-222	ENST00000600935	MRPS36	P82909	103 aa	Known RBP	6.22	□□□□□ -1.41
NUP62-222	ENST00000600935	FP248	Q71RG6	208 aa	Predicted RBP	6.22	□□□□□ -1.41
NUP62-222	ENST00000600935	KIR2DL4	Q99706	377 aa		6.22	□□□□□ -1.41
NUP62-222	ENST00000600935	IGKV2D-26	A0A0A0MRZ7	120 aa		6.21	□□□□□ -1.42
NUP62-222	ENST00000600935	TGIF2-C20orf24	A0A0A6YYL0	155 aa		6.21	□□□□□ -1.42
NUP62-222	ENST00000600935	RPL37AP8	A6NKH3	93 aa		6.21	□□□□□ -1.42
NUP62-222	ENST00000600935		A8MWL6	223 aa		6.21	□□□□□ -1.42
NUP62-222	ENST00000600935	GATC	O43716	136 aa	Known RBP	6.21	□□□□□ -1.42
NUP62-222	ENST00000600935	SEC61B	P60468	96 aa	Known RBP	6.21	□□□□□ -1.42
NUP62-222	ENST00000600935	LINC00337	Q8N6G1	96 aa		6.21	□□□□□ -1.42
NUP62-222	ENST00000600935	TMEM18	Q96B42	140 aa		6.21	□□□□□ -1.42
NUP62-222	ENST00000600935	LINC00167	Q96N53	147 aa		6.21	□□□□□ -1.42
NUP62-222	ENST00000600935		A0A1B0GUT8	65 aa		6.2	□□□□□ -1.42
NUP62-222	ENST00000600935	KRTAP10-6	P60371	365 aa	Predicted RBP	6.2	□□□□□ -1.42
NUP62-222	ENST00000600935	HBB	P68871	147 aa		6.2	□□□□□ -1.42
NUP62-222	ENST00000600935	FAM231D	Q6ZW35	169 aa		6.2	□□□□□ -1.42
NUP62-222	ENST00000600935	C3orf22	Q8N5N4	141 aa		6.2	□□□□□ -1.42
NUP62-222	ENST00000600935	SPANXA1	Q9NS26	97 aa		6.2	□□□□□ -1.42
NUP62-222	ENST00000600935	SSPO	A2VEC9	5147 aa		6.2	□□□□□ -1.42
NUP62-222	ENST00000600935	HIGD1C	A8MV81	97 aa		6.19	□□□□□ -1.42
NUP62-222	ENST00000600935	CFC1B	P0CG36	223 aa		6.19	□□□□□ -1.42
NUP62-222	ENST00000600935	CT83	Q5H943	113 aa		6.19	□□□□□ -1.42
NUP62-222	ENST00000600935	PPP1R2P9	O14990	202 aa		6.17	□□□□□ -1.42
NUP62-222	ENST00000600935	PPP1R17	O96001	155 aa		6.17	□□□□□ -1.42
NUP62-222	ENST00000600935	UBE2A	P49459	152 aa		6.17	□□□□□ -1.42
NUP62-222	ENST00000600935	RPL32	P62910	135 aa	Known RBP	6.17	□□□□□ -1.42
NUP62-222	ENST00000600935	BORCS7	Q96B45	105 aa		6.17	□□□□□ -1.42
NUP62-222	ENST00000600935	USH2A	O75445	5202 aa		6.16	□□□□□ -1.42
NUP62-222	ENST00000600935	TRBV24-1	A0A075B6N3	115 aa		6.16	□□□□□ -1.42
NUP62-222	ENST00000600935	KANTR	A0A1W2PQU2	76 aa		6.16	□□□□□ -1.42
NUP62-222	ENST00000600935	GAGE10	A6NGK3	116 aa		6.16	□□□□□ -1.42
NUP62-222	ENST00000600935	MRPL51	Q4U2R6	128 aa	Known RBP	6.16	□□□□□ -1.42
NUP62-222	ENST00000600935	LINC01561	Q8N1V8	128 aa		6.16	□□□□□ -1.42
NUP62-222	ENST00000600935	C20orf78	Q9BR46	151 aa		6.16	□□□□□ -1.42
NUP62-222	ENST00000600935	IGLV4-3	A0A075B6K6	122 aa		6.15	□□□□□ -1.42
NUP62-222	ENST00000600935	HMSD	A8MTL9	139 aa		6.15	□□□□□ -1.42
NUP62-222	ENST00000600935	PNRC1	Q12796	327 aa	Predicted RBP	6.15	□□□□□ -1.42
NUP62-222	ENST00000600935	SPAG11A	Q6PDA7	123 aa		6.15	□□□□□ -1.42
NUP62-222	ENST00000600935	IGLV5-37	A0A075B6J1	123 aa		6.14	□□□□□ -1.43
NUP62-222	ENST00000600935	TEX46	H3BTG2	121 aa		6.14	□□□□□ -1.43
NUP62-222	ENST00000600935	PRLH	P81277	87 aa		6.14	□□□□□ -1.43
NUP62-222	ENST00000600935	XP32	Q5T750	250 aa		6.14	□□□□□ -1.43
NUP62-222	ENST00000600935	FAM104B	Q5XKR9	115 aa		6.14	□□□□□ -1.43
NUP62-222	ENST00000600935		Q8IZM0	81 aa		6.14	□□□□□ -1.43
NUP62-222	ENST00000600935	SMIM2	Q9BVW6	85 aa		6.14	□□□□□ -1.43
NUP62-222	ENST00000600935	TCAP	O15273	167 aa		6.13	□□□□□ -1.43
NUP62-222	ENST00000600935	TNFRSF6B	O95407	300 aa		6.13	□□□□□ -1.43
NUP62-222	ENST00000600935	CKS1B	P61024	79 aa		6.13	□□□□□ -1.43
NUP62-222	ENST00000600935	ZC2HC1B	Q5TFG8	222 aa		6.13	□□□□□ -1.43
NUP62-222	ENST00000600935	PLEKHB2	Q96CS7	222 aa		6.13	□□□□□ -1.43
NUP62-222	ENST00000600935	TOMM7	Q9P0U1	55 aa		6.13	□□□□□ -1.43
NUP62-222	ENST00000600935	SCO1	O75880	301 aa		6.12	□□□□□ -1.43
NUP62-222	ENST00000600935	PRSS2	P07478	247 aa		6.12	□□□□□ -1.43
NUP62-222	ENST00000600935	C6orf226	Q5I0X4	101 aa		6.12	□□□□□ -1.43
NUP62-222	ENST00000600935	PYGO1	Q9Y3Y4	419 aa		6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms