RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 IFITM10A6NMD0 228 aa7.75□□□□□ -1.17
CHMP2A-207ENST00000600804 UBE2D1P51668 147 aa7.75□□□□□ -1.17
CHMP2A-207ENST00000600804 TNP2Q05952 138 aa7.75□□□□□ -1.17
CHMP2A-207ENST00000600804 CLPSL2Q6UWE3 100 aa7.75□□□□□ -1.17
CHMP2A-207ENST00000600804 CST9LQ9H4G1 147 aa7.75□□□□□ -1.17
CHMP2A-207ENST00000600804 C5orf52A6NGY3 159 aa7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 SEC11AP67812 179 aa7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 RNASE13Q5GAN3 156 aaKnown RBP7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 HIST3H2BBQ8N257 126 aa7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 MAPKAPK5-AS1Q8N8E1 139 aa7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 CHCHD10Q8WYQ3 142 aaPredicted RBP7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 Q9HAA7 133 aa7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
CHMP2A-207ENST00000600804 IGKV2D-24A0A075B6R9 120 aa7.73□□□□□ -1.17
CHMP2A-207ENST00000600804 TRAV13-1A0A0B4J241 112 aa7.73□□□□□ -1.17
CHMP2A-207ENST00000600804 CDK2AP2O75956 126 aa7.73□□□□□ -1.17
CHMP2A-207ENST00000600804 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
CHMP2A-207ENST00000600804 SPATA12Q7Z6I5 190 aa7.73□□□□□ -1.17
CHMP2A-207ENST00000600804 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
CHMP2A-207ENST00000600804 IGHV3OR16-9A0A0B4J2B5 98 aa7.72□□□□□ -1.17
CHMP2A-207ENST00000600804 IGKV3OR2-268A0A0C4DH90 116 aa7.72□□□□□ -1.17
CHMP2A-207ENST00000600804 PRSS1P07477 247 aa7.72□□□□□ -1.17
CHMP2A-207ENST00000600804 HERVK_113P63121 156 aa7.72□□□□□ -1.17
CHMP2A-207ENST00000600804 FOXI1Q12951 378 aa7.72□□□□□ -1.17
CHMP2A-207ENST00000600804 LINC01561Q8N1V8 128 aa7.72□□□□□ -1.17
CHMP2A-207ENST00000600804 IGLV10-54A0A075B6I4 117 aa7.71□□□□□ -1.18
CHMP2A-207ENST00000600804 TINCRA0A1B0GVN0 87 aa7.71□□□□□ -1.18
CHMP2A-207ENST00000600804 IGLC3P0DOY3 106 aa7.71□□□□□ -1.18
CHMP2A-207ENST00000600804 FABP4P15090 132 aa7.71□□□□□ -1.18
CHMP2A-207ENST00000600804 SNRPEP62304 92 aaKnown RBP7.71□□□□□ -1.18
CHMP2A-207ENST00000600804 ZC2HC1BQ5TFG8 222 aa7.71□□□□□ -1.18
CHMP2A-207ENST00000600804 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.18
CHMP2A-207ENST00000600804 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
CHMP2A-207ENST00000600804 GAGE12HA6NDE8 117 aa7.7□□□□□ -1.18
CHMP2A-207ENST00000600804 C16orf90A8MZG2 172 aa7.7□□□□□ -1.18
CHMP2A-207ENST00000600804 S100A2P29034 98 aa7.7□□□□□ -1.18
CHMP2A-207ENST00000600804 XCL1P47992 114 aa7.7□□□□□ -1.18
CHMP2A-207ENST00000600804 HIST1H2BLQ99880 126 aa7.7□□□□□ -1.18
CHMP2A-207ENST00000600804 IGLV4-69A0A075B6H9 119 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 A0A087WZ39 114 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 LRCOL1A6NCL2 159 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 F8VRH5 84 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 SYS1-DBNDD2H3BUS1 97 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 PSCAO43653 123 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 ODF1Q14990 250 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 PET117Q6UWS5 81 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 Q8N1X5 172 aa7.69□□□□□ -1.18
CHMP2A-207ENST00000600804 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
CHMP2A-207ENST00000600804 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
CHMP2A-207ENST00000600804 COX7A2LO14548 114 aa7.68□□□□□ -1.18
CHMP2A-207ENST00000600804 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
CHMP2A-207ENST00000600804 GEMIN7Q9H840 131 aaKnown RBP7.68□□□□□ -1.18
CHMP2A-207ENST00000600804 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
CHMP2A-207ENST00000600804 CHTOPQ9Y3Y2 248 aaKnown RBP7.68□□□□□ -1.18
CHMP2A-207ENST00000600804 C3orf79P0CE67 100 aa7.67□□□□□ -1.18
CHMP2A-207ENST00000600804 COX6A2Q02221 97 aa7.67□□□□□ -1.18
CHMP2A-207ENST00000600804 C14orf177Q52M58 125 aa7.67□□□□□ -1.18
CHMP2A-207ENST00000600804 LINC01545Q5VT33 79 aa7.67□□□□□ -1.18
CHMP2A-207ENST00000600804 MRPL35Q9NZE8 188 aaKnown RBP7.67□□□□□ -1.18
CHMP2A-207ENST00000600804 A0A087WTM6 91 aa7.66□□□□□ -1.18
CHMP2A-207ENST00000600804 IGHV1-58A0A0C4DH39 117 aa7.66□□□□□ -1.18
CHMP2A-207ENST00000600804 PLNP26678 52 aa7.66□□□□□ -1.18
CHMP2A-207ENST00000600804 AKR1D1P51857 326 aa7.66□□□□□ -1.18
CHMP2A-207ENST00000600804 CHAC1Q9BUX1 264 aa7.66□□□□□ -1.18
CHMP2A-207ENST00000600804 GVQW2A0A096LPI5 108 aaPredicted RBP7.65□□□□□ -1.18
CHMP2A-207ENST00000600804 C11orf86A6NJI1 115 aa7.65□□□□□ -1.18
CHMP2A-207ENST00000600804 APOMO95445 188 aa7.65□□□□□ -1.18
CHMP2A-207ENST00000600804 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.18
CHMP2A-207ENST00000600804 CDKN2A-AS1Q9UH64 79 aa7.65□□□□□ -1.18
CHMP2A-207ENST00000600804 SRRM2Q9UQ35 2752 aaKnown RBP7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 IGHV3-64A0A075B6Q5 118 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 USP17L23D6RBM5 183 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 H3BRM9 83 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 DPM2O94777 84 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 KRTAP10-2P60368 255 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 KRTDAPP60985 99 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 C5orf38Q86SI9 138 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 LINC00469Q8N7U9 141 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 C15orf56Q8N910 161 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 OR10D4PQ8NGN7 298 aa7.64□□□□□ -1.19
CHMP2A-207ENST00000600804 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
CHMP2A-207ENST00000600804 C20orf202A1L168 122 aa7.63□□□□□ -1.19
CHMP2A-207ENST00000600804 F8WDY8 70 aa7.63□□□□□ -1.19
CHMP2A-207ENST00000600804 EREGO14944 169 aa7.63□□□□□ -1.19
CHMP2A-207ENST00000600804 MALP21145 153 aa7.63□□□□□ -1.19
CHMP2A-207ENST00000600804 IGLV5-39A0A0G2JS06 123 aa7.62□□□□□ -1.19
CHMP2A-207ENST00000600804 SMIM1B2RUZ4 78 aa7.62□□□□□ -1.19
CHMP2A-207ENST00000600804 H0Y8G0 127 aa7.62□□□□□ -1.19
CHMP2A-207ENST00000600804 IGKCP01834 107 aa7.62□□□□□ -1.19
CHMP2A-207ENST00000600804 WFDC2Q14508 124 aa7.62□□□□□ -1.19
CHMP2A-207ENST00000600804 Q8N814 137 aa7.62□□□□□ -1.19
CHMP2A-207ENST00000600804 NTN5Q8WTR8 489 aaPredicted RBP7.62□□□□□ -1.19
CHMP2A-207ENST00000600804 C2orf48Q96LS8 159 aa7.61□□□□□ -1.19
CHMP2A-207ENST00000600804 TMEM223A0PJW6 202 aa7.6□□□□□ -1.19
CHMP2A-207ENST00000600804 CNBPP62633 177 aaKnown RBP7.6□□□□□ -1.19
CHMP2A-207ENST00000600804 KIAA0087Q14695 138 aa7.6□□□□□ -1.19
CHMP2A-207ENST00000600804 TMEM170BQ5T4T1 132 aa7.6□□□□□ -1.19
CHMP2A-207ENST00000600804 Q8IZM0 81 aa7.6□□□□□ -1.19
CHMP2A-207ENST00000600804 hDV102S1A0JD36 115 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms