RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 SPANXA1Q9NS26 97 aa7.39□□□□□ -1.23
SOX2-OT-233ENST00000600778 K7EMI3 77 aa7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 CIRBPQ14011 172 aaKnown RBP7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 SS18Q15532 418 aa7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 ORMDL2Q53FV1 153 aa7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 RNASE13Q5GAN3 156 aaKnown RBP7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 Q6ZUT4 128 aa7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 YPEL4Q96NS1 127 aa7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 OPRPNQ99935 248 aaPredicted RBP7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 TRAPPC1Q9Y5R8 145 aa7.38□□□□□ -1.23
SOX2-OT-233ENST00000600778 A0A087WYN8 130 aa7.37□□□□□ -1.23
SOX2-OT-233ENST00000600778 CCL25O15444 150 aa7.37□□□□□ -1.23
SOX2-OT-233ENST00000600778 XCL1P47992 114 aa7.37□□□□□ -1.23
SOX2-OT-233ENST00000600778 HNRNPA3P51991 378 aaKnown RBP7.37□□□□□ -1.23
SOX2-OT-233ENST00000600778 MRPS36P82909 103 aaKnown RBP7.37□□□□□ -1.23
SOX2-OT-233ENST00000600778 FOXI1Q12951 378 aa7.37□□□□□ -1.23
SOX2-OT-233ENST00000600778 PYGO1Q9Y3Y4 419 aa7.37□□□□□ -1.23
SOX2-OT-233ENST00000600778 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 C1orf196B1AJZ1 125 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 OXTP01178 125 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 COX6A2Q02221 97 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 CD164L2Q6UWJ8 174 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 C2orf66Q6UXQ4 117 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 PRSS3P2Q8NHM4 247 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 SMCO4Q9NRQ5 59 aa7.36□□□□□ -1.23
SOX2-OT-233ENST00000600778 GVQW2A0A096LPI5 108 aaPredicted RBP7.35□□□□□ -1.23
SOX2-OT-233ENST00000600778 CBLN2Q8IUK8 224 aa7.35□□□□□ -1.23
SOX2-OT-233ENST00000600778 CYSLTR1Q9Y271 337 aa7.35□□□□□ -1.23
SOX2-OT-233ENST00000600778 IGLV4-3A0A075B6K6 122 aa7.34□□□□□ -1.23
SOX2-OT-233ENST00000600778 IGKV2-24A0A0C4DH68 120 aa7.34□□□□□ -1.23
SOX2-OT-233ENST00000600778 LINC01546A6NGU7 62 aa7.34□□□□□ -1.23
SOX2-OT-233ENST00000600778 MAJINQ3KP22 176 aa7.34□□□□□ -1.23
SOX2-OT-233ENST00000600778 LINC00526Q96FQ7 95 aa7.34□□□□□ -1.23
SOX2-OT-233ENST00000600778 IGHV1-58A0A0C4DH39 117 aa7.33□□□□□ -1.24
SOX2-OT-233ENST00000600778 IGIPA6NJ69 53 aa7.33□□□□□ -1.24
SOX2-OT-233ENST00000600778 G0S2P27469 103 aa7.33□□□□□ -1.24
SOX2-OT-233ENST00000600778 PLAC8Q9NZF1 115 aa7.33□□□□□ -1.24
SOX2-OT-233ENST00000600778 IFITM10A6NMD0 228 aa7.32□□□□□ -1.24
SOX2-OT-233ENST00000600778 NPSP0C0P6 89 aa7.32□□□□□ -1.24
SOX2-OT-233ENST00000600778 FA2HQ7L5A8 372 aa7.32□□□□□ -1.24
SOX2-OT-233ENST00000600778 TOMM6Q96B49 74 aa7.32□□□□□ -1.24
SOX2-OT-233ENST00000600778 TMEM141Q96I45 108 aa7.32□□□□□ -1.24
SOX2-OT-233ENST00000600778 ZNF561-AS1K7EIQ3 104 aa7.31□□□□□ -1.24
SOX2-OT-233ENST00000600778 COX7A2LO14548 114 aa7.31□□□□□ -1.24
SOX2-OT-233ENST00000600778 STPG4Q8N801 248 aa7.31□□□□□ -1.24
SOX2-OT-233ENST00000600778 C18orf32Q8TCD1 76 aa7.31□□□□□ -1.24
SOX2-OT-233ENST00000600778 AMELXQ99217 191 aa7.31□□□□□ -1.24
SOX2-OT-233ENST00000600778 VCX2Q9H322 139 aa7.31□□□□□ -1.24
SOX2-OT-233ENST00000600778 A0A096LNI7 61 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 LINC00614P0C842 121 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 MALP21145 153 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 ZC2HC1BQ5TFG8 222 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 SERTAD4-AS1Q5TG53 156 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 Q6ZN92 141 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 TEX43Q6ZNM6 134 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 C5orf38Q86SI9 138 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 C7orf33Q8WU49 177 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 URB1-AS1Q96HZ7 61 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 CARD19Q96LW7 228 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 SCGB3A1Q96QR1 104 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 TIMM17AQ99595 171 aa7.3□□□□□ -1.24
SOX2-OT-233ENST00000600778 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
SOX2-OT-233ENST00000600778 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
SOX2-OT-233ENST00000600778 LINC00242Q5T6M2 205 aa7.29□□□□□ -1.24
SOX2-OT-233ENST00000600778 Q6ZRU5 148 aa7.29□□□□□ -1.24
SOX2-OT-233ENST00000600778 ERASQ7Z444 233 aa7.29□□□□□ -1.24
SOX2-OT-233ENST00000600778 C2orf88Q9BSF0 95 aa7.29□□□□□ -1.24
SOX2-OT-233ENST00000600778 LINC01549A6NIU2 74 aa7.28□□□□□ -1.24
SOX2-OT-233ENST00000600778 COLCA2A8K830 154 aa7.28□□□□□ -1.24
SOX2-OT-233ENST00000600778 UBE2D1P51668 147 aa7.28□□□□□ -1.24
SOX2-OT-233ENST00000600778 SYCNQ0VAF6 134 aa7.28□□□□□ -1.24
SOX2-OT-233ENST00000600778 PAPPA-AS1Q5QFB9 102 aa7.28□□□□□ -1.24
SOX2-OT-233ENST00000600778 LINC00173Q6ZV60 143 aa7.28□□□□□ -1.24
SOX2-OT-233ENST00000600778 IGLV4-69A0A075B6H9 119 aa7.27□□□□□ -1.25
SOX2-OT-233ENST00000600778 APOMO95445 188 aa7.27□□□□□ -1.25
SOX2-OT-233ENST00000600778 RAB5BP61020 215 aa7.27□□□□□ -1.25
SOX2-OT-233ENST00000600778 LINC00474Q9P2X8 69 aa7.27□□□□□ -1.25
SOX2-OT-233ENST00000600778 PKIGQ9Y2B9 76 aa7.27□□□□□ -1.25
SOX2-OT-233ENST00000600778 TNXBP22105 4242 aa7.27□□□□□ -1.25
SOX2-OT-233ENST00000600778 TRGC2P03986 189 aa7.26□□□□□ -1.25
SOX2-OT-233ENST00000600778 A0A087WZ39 114 aa7.25□□□□□ -1.25
SOX2-OT-233ENST00000600778 A0A096LNJ9 63 aa7.25□□□□□ -1.25
SOX2-OT-233ENST00000600778 FAM19A3Q7Z5A8 133 aa7.25□□□□□ -1.25
SOX2-OT-233ENST00000600778 CAMK2N2Q96S95 79 aa7.25□□□□□ -1.25
SOX2-OT-233ENST00000600778 LOC107984640A0A0U1RRK4 108 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 SCO1O75880 301 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 HBDP02042 147 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 PRR3P79522 188 aaKnown RBP7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 SPAG11BQ08648 103 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 GAGE2BQ13066 116 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 PMCHL1Q16048 86 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 PDZD11Q5EBL8 140 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 OR10D4PQ8NGN7 298 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 CHCHD1Q96BP2 118 aaKnown RBP7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 C2orf48Q96LS8 159 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 CST9LQ9H4G1 147 aa7.24□□□□□ -1.25
SOX2-OT-233ENST00000600778 A0A0J9YXV3 536 aa7.23□□□□□ -1.25
SOX2-OT-233ENST00000600778 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms