RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 LINC00959A0A1B0GUT2 108 aa8.43□□□□□ -1.06
SH2D3A-208ENST00000599563 FABP4P15090 132 aa8.43□□□□□ -1.06
SH2D3A-208ENST00000599563 KRTAP26-1Q6PEX3 210 aa8.43□□□□□ -1.06
SH2D3A-208ENST00000599563 TMA7Q9Y2S6 64 aaKnown RBP8.43□□□□□ -1.06
SH2D3A-208ENST00000599563 ABCA13Q86UQ4 5058 aa8.43□□□□□ -1.06
SH2D3A-208ENST00000599563 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
SH2D3A-208ENST00000599563 IFITM10A6NMD0 228 aa8.42□□□□□ -1.06
SH2D3A-208ENST00000599563 LECT2O14960 151 aa8.42□□□□□ -1.06
SH2D3A-208ENST00000599563 LEPROTL1O95214 131 aa8.42□□□□□ -1.06
SH2D3A-208ENST00000599563 WFDC2Q14508 124 aa8.42□□□□□ -1.06
SH2D3A-208ENST00000599563 TEX43Q6ZNM6 134 aa8.42□□□□□ -1.06
SH2D3A-208ENST00000599563 LINC01549A6NIU2 74 aa8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 FAM229AH3BQW9 127 aa8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 CCL25O15444 150 aa8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 NPSP0C0P6 89 aa8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 Q6ZN92 141 aa8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 HIST3H2BBQ8N257 126 aa8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 IFI27L1Q96BM0 104 aa8.41□□□□□ -1.06
SH2D3A-208ENST00000599563 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.4□□□□□ -1.06
SH2D3A-208ENST00000599563 ATP5LO75964 103 aa8.4□□□□□ -1.06
SH2D3A-208ENST00000599563 UBE2D1P51668 147 aa8.4□□□□□ -1.06
SH2D3A-208ENST00000599563 SNRPEP62304 92 aaKnown RBP8.4□□□□□ -1.06
SH2D3A-208ENST00000599563 VCX2Q9H322 139 aa8.4□□□□□ -1.06
SH2D3A-208ENST00000599563 GAGE12HA6NDE8 117 aa8.39□□□□□ -1.07
SH2D3A-208ENST00000599563 S100A6P06703 90 aa8.39□□□□□ -1.07
SH2D3A-208ENST00000599563 XCL1P47992 114 aa8.39□□□□□ -1.07
SH2D3A-208ENST00000599563 COX6A2Q02221 97 aa8.39□□□□□ -1.07
SH2D3A-208ENST00000599563 PMVKQ15126 192 aa8.39□□□□□ -1.07
SH2D3A-208ENST00000599563 Q5VSD8 79 aa8.39□□□□□ -1.07
SH2D3A-208ENST00000599563 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 A0A0J9YXV3 536 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 C5orf52A6NGY3 159 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 H0Y8G0 127 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 FOXI1Q12951 378 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 SS18Q15532 418 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 Q6ZSA8 131 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 CST9LQ9H4G1 147 aa8.38□□□□□ -1.07
SH2D3A-208ENST00000599563 IGLV4-69A0A075B6H9 119 aa8.37□□□□□ -1.07
SH2D3A-208ENST00000599563 PRSS1P07477 247 aa8.36□□□□□ -1.07
SH2D3A-208ENST00000599563 INAFM2P0DMQ5 153 aa8.36□□□□□ -1.07
SH2D3A-208ENST00000599563 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
SH2D3A-208ENST00000599563 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
SH2D3A-208ENST00000599563 HIST1H2BLQ99880 126 aa8.36□□□□□ -1.07
SH2D3A-208ENST00000599563 HSPB8Q9UJY1 196 aa8.36□□□□□ -1.07
SH2D3A-208ENST00000599563 SRRM2Q9UQ35 2752 aaKnown RBP8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 USP17L23D6RBM5 183 aa8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 C3orf79P0CE67 100 aa8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 ODF1Q14990 250 aa8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 CD164L2Q6UWJ8 174 aa8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 CHTOPQ9Y3Y2 248 aaKnown RBP8.35□□□□□ -1.07
SH2D3A-208ENST00000599563 IGHV3OR16-9A0A0B4J2B5 98 aa8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 C11orf86A6NJI1 115 aa8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 IGLC3P0DOY3 106 aa8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 S100A2P29034 98 aa8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 C15orf56Q8N910 161 aa8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
SH2D3A-208ENST00000599563 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
SH2D3A-208ENST00000599563 SYS1-DBNDD2H3BUS1 97 aa8.33□□□□□ -1.08
SH2D3A-208ENST00000599563 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
SH2D3A-208ENST00000599563 MAP1LC3CQ9BXW4 147 aa8.33□□□□□ -1.08
SH2D3A-208ENST00000599563 CDKN2A-AS1Q9UH64 79 aa8.33□□□□□ -1.08
SH2D3A-208ENST00000599563 F8VRH5 84 aa8.32□□□□□ -1.08
SH2D3A-208ENST00000599563 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
SH2D3A-208ENST00000599563 KRTDAPP60985 99 aa8.32□□□□□ -1.08
SH2D3A-208ENST00000599563 HAMPP81172 84 aa8.32□□□□□ -1.08
SH2D3A-208ENST00000599563 IGLV5-45A0A087WSX0 123 aa8.31□□□□□ -1.08
SH2D3A-208ENST00000599563 HERVK_113P63121 156 aa8.31□□□□□ -1.08
SH2D3A-208ENST00000599563 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
SH2D3A-208ENST00000599563 DMBT1Q9UGM3 2413 aaPredicted RBP8.3□□□□□ -1.08
SH2D3A-208ENST00000599563 COX7A2LO14548 114 aa8.3□□□□□ -1.08
SH2D3A-208ENST00000599563 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
SH2D3A-208ENST00000599563 HIGD2BQ4VC39 106 aa8.3□□□□□ -1.08
SH2D3A-208ENST00000599563 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
SH2D3A-208ENST00000599563 LINC00526Q96FQ7 95 aa8.3□□□□□ -1.08
SH2D3A-208ENST00000599563 VPS13BQ7Z7G8 4022 aa8.3□□□□□ -1.08
SH2D3A-208ENST00000599563 A0A087WZ39 114 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 SPINK8P0C7L1 97 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 LINC01545Q5VT33 79 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 SCXQ7RTU7 201 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 C9orf163Q8N9P6 203 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 DNAH8Q96JB1 4490 aa8.29□□□□□ -1.08
SH2D3A-208ENST00000599563 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.28□□□□□ -1.08
SH2D3A-208ENST00000599563 SMIM1B2RUZ4 78 aa8.28□□□□□ -1.08
SH2D3A-208ENST00000599563 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
SH2D3A-208ENST00000599563 SEC11AP67812 179 aa8.28□□□□□ -1.08
SH2D3A-208ENST00000599563 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms