RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 Q8N8P6 123 aa7.6□□□□□ -1.19
LIG1-217ENST00000599165 IMMP2LQ96T52 175 aa7.6□□□□□ -1.19
LIG1-217ENST00000599165 PYGO1Q9Y3Y4 419 aa7.6□□□□□ -1.19
LIG1-217ENST00000599165 TNXBP22105 4242 aa7.6□□□□□ -1.19
LIG1-217ENST00000599165 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.59□□□□□ -1.19
LIG1-217ENST00000599165 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
LIG1-217ENST00000599165 MALP21145 153 aa7.59□□□□□ -1.19
LIG1-217ENST00000599165 ZC2HC1BQ5TFG8 222 aa7.59□□□□□ -1.19
LIG1-217ENST00000599165 DPH3Q96FX2 82 aa7.59□□□□□ -1.19
LIG1-217ENST00000599165 C2orf48Q96LS8 159 aa7.59□□□□□ -1.19
LIG1-217ENST00000599165 MAP1LC3AQ9H492 121 aa7.59□□□□□ -1.19
LIG1-217ENST00000599165 IFITM10A6NMD0 228 aa7.58□□□□□ -1.2
LIG1-217ENST00000599165 RAB5AP20339 215 aa7.58□□□□□ -1.2
LIG1-217ENST00000599165 PTTG1IPP53801 180 aa7.58□□□□□ -1.2
LIG1-217ENST00000599165 SPAG11BQ08648 103 aa7.58□□□□□ -1.2
LIG1-217ENST00000599165 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
LIG1-217ENST00000599165 A0A0J9YXV3 536 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 A0A1W2PNN7 141 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 IFI27P40305 119 aaPredicted RBP7.57□□□□□ -1.2
LIG1-217ENST00000599165 PRR3P79522 188 aaKnown RBP7.57□□□□□ -1.2
LIG1-217ENST00000599165 KIAA0087Q14695 138 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 KIAA1644Q3SXP7 199 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 C10orf91Q5T1B1 145 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 C10orf25Q5T742 122 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 C2orf66Q6UXQ4 117 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 SEC11CQ9BY50 192 aa7.57□□□□□ -1.2
LIG1-217ENST00000599165 IGIPA6NJ69 53 aa7.56□□□□□ -1.2
LIG1-217ENST00000599165 APOMO95445 188 aa7.56□□□□□ -1.2
LIG1-217ENST00000599165 UBE2D1P51668 147 aa7.56□□□□□ -1.2
LIG1-217ENST00000599165 COMMD7Q86VX2 200 aa7.56□□□□□ -1.2
LIG1-217ENST00000599165 OR10D4PQ8NGN7 298 aa7.56□□□□□ -1.2
LIG1-217ENST00000599165 ORAOV1Q8WV07 137 aa7.56□□□□□ -1.2
LIG1-217ENST00000599165 AMELXQ99217 191 aa7.56□□□□□ -1.2
LIG1-217ENST00000599165 CTDSP1Q9GZU7 261 aa7.56□□□□□ -1.2
LIG1-217ENST00000599165 A0A087WZ39 114 aa7.55□□□□□ -1.2
LIG1-217ENST00000599165 LOC107984640A0A0U1RRK4 108 aa7.55□□□□□ -1.2
LIG1-217ENST00000599165 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
LIG1-217ENST00000599165 TMEM141Q96I45 108 aa7.55□□□□□ -1.2
LIG1-217ENST00000599165 LINC00474Q9P2X8 69 aa7.55□□□□□ -1.2
LIG1-217ENST00000599165 TRAV9-1A0A075B6T8 112 aa7.54□□□□□ -1.2
LIG1-217ENST00000599165 RNF151Q2KHN1 245 aa7.54□□□□□ -1.2
LIG1-217ENST00000599165 UNQ6190/PRO20217Q6UXQ8 127 aa7.54□□□□□ -1.2
LIG1-217ENST00000599165 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
LIG1-217ENST00000599165 MRPL35Q9NZE8 188 aaKnown RBP7.54□□□□□ -1.2
LIG1-217ENST00000599165 C6orf48Q9UBA6 75 aa7.54□□□□□ -1.2
LIG1-217ENST00000599165 CYSLTR1Q9Y271 337 aa7.54□□□□□ -1.2
LIG1-217ENST00000599165 CARHSP1Q9Y2V2 147 aaKnown RBP7.54□□□□□ -1.2
LIG1-217ENST00000599165 K7EMI3 77 aa7.53□□□□□ -1.2
LIG1-217ENST00000599165 ORMDL2Q53FV1 153 aa7.53□□□□□ -1.2
LIG1-217ENST00000599165 FAM19A3Q7Z5A8 133 aa7.53□□□□□ -1.2
LIG1-217ENST00000599165 NXT2Q9NPJ8 142 aaKnown RBP7.53□□□□□ -1.2
LIG1-217ENST00000599165 PKIGQ9Y2B9 76 aa7.53□□□□□ -1.2
LIG1-217ENST00000599165 LINC01546A6NGU7 62 aa7.52□□□□□ -1.21
LIG1-217ENST00000599165 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
LIG1-217ENST00000599165 TEX43Q6ZNM6 134 aa7.52□□□□□ -1.21
LIG1-217ENST00000599165 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.21
LIG1-217ENST00000599165 TGIF2-C20orf24A0A0A6YYL0 155 aa7.51□□□□□ -1.21
LIG1-217ENST00000599165 NPSP0C0P6 89 aa7.51□□□□□ -1.21
LIG1-217ENST00000599165 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
LIG1-217ENST00000599165 RPL18AQ02543 176 aaKnown RBP7.51□□□□□ -1.21
LIG1-217ENST00000599165 SRSF9Q13242 221 aaKnown RBP eCLIP7.51□□□□□ -1.21
LIG1-217ENST00000599165 Q6ZRP5 223 aa7.51□□□□□ -1.21
LIG1-217ENST00000599165 TOMM6Q96B49 74 aa7.51□□□□□ -1.21
LIG1-217ENST00000599165 ALKBH7Q9BT30 221 aaPredicted RBP7.51□□□□□ -1.21
LIG1-217ENST00000599165 GNB1LQ9BYB4 327 aa7.51□□□□□ -1.21
LIG1-217ENST00000599165 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
LIG1-217ENST00000599165 F8WDY8 70 aa7.5□□□□□ -1.21
LIG1-217ENST00000599165 NDUFA1O15239 70 aa7.5□□□□□ -1.21
LIG1-217ENST00000599165 C2orf82Q6UX34 121 aa7.5□□□□□ -1.21
LIG1-217ENST00000599165 KRTAP11-1Q8IUC1 163 aa7.5□□□□□ -1.21
LIG1-217ENST00000599165 LINC01561Q8N1V8 128 aa7.5□□□□□ -1.21
LIG1-217ENST00000599165 PHF5AQ7RTV0 110 aaKnown RBP7.49□□□□□ -1.21
LIG1-217ENST00000599165 TIMM17AQ99595 171 aa7.49□□□□□ -1.21
LIG1-217ENST00000599165 VCX2Q9H322 139 aa7.49□□□□□ -1.21
LIG1-217ENST00000599165 RHEBQ15382 184 aa7.48□□□□□ -1.21
LIG1-217ENST00000599165 Q6ZN92 141 aa7.48□□□□□ -1.21
LIG1-217ENST00000599165 URB1-AS1Q96HZ7 61 aa7.48□□□□□ -1.21
LIG1-217ENST00000599165 C2orf88Q9BSF0 95 aa7.48□□□□□ -1.21
LIG1-217ENST00000599165 S100PP25815 95 aa7.47□□□□□ -1.21
LIG1-217ENST00000599165 ERASQ7Z444 233 aa7.47□□□□□ -1.21
LIG1-217ENST00000599165 MRPL18Q9H0U6 180 aaKnown RBP7.47□□□□□ -1.21
LIG1-217ENST00000599165 RPS10P5Q9NQ39 176 aa7.47□□□□□ -1.21
LIG1-217ENST00000599165 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
LIG1-217ENST00000599165 PSORS1C2Q9UIG4 136 aa7.47□□□□□ -1.21
LIG1-217ENST00000599165 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
LIG1-217ENST00000599165 A0A096LNJ9 63 aa7.46□□□□□ -1.22
LIG1-217ENST00000599165 ODF1Q14990 250 aa7.46□□□□□ -1.22
LIG1-217ENST00000599165 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.22
LIG1-217ENST00000599165 LINC01600Q96MT4 127 aa7.46□□□□□ -1.22
LIG1-217ENST00000599165 TRBV30A0A0K0K1B3 111 aa7.45□□□□□ -1.22
LIG1-217ENST00000599165 MT-ND6P03923 174 aa7.45□□□□□ -1.22
LIG1-217ENST00000599165 GAGE2EQ4V326 116 aa7.45□□□□□ -1.22
LIG1-217ENST00000599165 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
LIG1-217ENST00000599165 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
LIG1-217ENST00000599165 SCGB3A1Q96QR1 104 aa7.45□□□□□ -1.22
LIG1-217ENST00000599165 GAGE2DQ9UEU5 116 aa7.45□□□□□ -1.22
LIG1-217ENST00000599165 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
LIG1-217ENST00000599165 HERVK_113P63121 156 aa7.44□□□□□ -1.22
LIG1-217ENST00000599165 FABP9Q0Z7S8 132 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms