RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
XRCC1-206ENST00000597811 IGLV4-3A0A075B6K6 122 aa9.99□□□□□ -0.81
XRCC1-206ENST00000597811 C9orf163Q8N9P6 203 aa9.99□□□□□ -0.81
XRCC1-206ENST00000597811 VCX2Q9H322 139 aa9.99□□□□□ -0.81
XRCC1-206ENST00000597811 IGHV3-64A0A075B6Q5 118 aa9.98□□□□□ -0.81
XRCC1-206ENST00000597811 APOMO95445 188 aa9.98□□□□□ -0.81
XRCC1-206ENST00000597811 CNBPP62633 177 aaKnown RBP9.98□□□□□ -0.81
XRCC1-206ENST00000597811 CBLN2Q8IUK8 224 aa9.98□□□□□ -0.81
XRCC1-206ENST00000597811 DPH3Q96FX2 82 aa9.98□□□□□ -0.81
XRCC1-206ENST00000597811 GVQW2A0A096LPI5 108 aaPredicted RBP9.97□□□□□ -0.81
XRCC1-206ENST00000597811 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
XRCC1-206ENST00000597811 LINC00526Q96FQ7 95 aa9.97□□□□□ -0.81
XRCC1-206ENST00000597811 SCGB3A1Q96QR1 104 aa9.97□□□□□ -0.81
XRCC1-206ENST00000597811 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.82
XRCC1-206ENST00000597811 TOMM6Q96B49 74 aa9.96□□□□□ -0.82
XRCC1-206ENST00000597811 SLPIP03973 132 aa9.95□□□□□ -0.82
XRCC1-206ENST00000597811 ZC2HC1BQ5TFG8 222 aa9.95□□□□□ -0.82
XRCC1-206ENST00000597811 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
XRCC1-206ENST00000597811 LINC00528Q8N1L1 170 aa9.94□□□□□ -0.82
XRCC1-206ENST00000597811 LINC01549A6NIU2 74 aa9.93□□□□□ -0.82
XRCC1-206ENST00000597811 IGIPA6NJ69 53 aa9.93□□□□□ -0.82
XRCC1-206ENST00000597811 NPSP0C0P6 89 aa9.93□□□□□ -0.82
XRCC1-206ENST00000597811 ERASQ7Z444 233 aa9.93□□□□□ -0.82
XRCC1-206ENST00000597811 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
XRCC1-206ENST00000597811 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
XRCC1-206ENST00000597811 TIMM17AQ99595 171 aa9.93□□□□□ -0.82
XRCC1-206ENST00000597811 CHAC1Q9BUX1 264 aa9.93□□□□□ -0.82
XRCC1-206ENST00000597811 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 LINC00614P0C842 121 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 UBE2D1P51668 147 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 RAB5BP61020 215 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 SPAG11BQ08648 103 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 SYCNQ0VAF6 134 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 ORAOV1Q8WV07 137 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 YPEL4Q96NS1 127 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 CAMK2N2Q96S95 79 aa9.92□□□□□ -0.82
XRCC1-206ENST00000597811 LRP1Q07954 4544 aaKnown RBP9.92□□□□□ -0.82
XRCC1-206ENST00000597811 IGHV3OR16-9A0A0B4J2B5 98 aa9.91□□□□□ -0.82
XRCC1-206ENST00000597811 LINC01546A6NGU7 62 aa9.91□□□□□ -0.82
XRCC1-206ENST00000597811 COX6A2Q02221 97 aa9.91□□□□□ -0.82
XRCC1-206ENST00000597811 LINC00242Q5T6M2 205 aa9.91□□□□□ -0.82
XRCC1-206ENST00000597811 AMELXQ99217 191 aa9.91□□□□□ -0.82
XRCC1-206ENST00000597811 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
XRCC1-206ENST00000597811 CIRBP-AS1Q8TBR5 109 aa9.9□□□□□ -0.82
XRCC1-206ENST00000597811 GEMIN7Q9H840 131 aaKnown RBP9.9□□□□□ -0.82
XRCC1-206ENST00000597811 IGKV2-24A0A0C4DH68 120 aa9.89□□□□□ -0.83
XRCC1-206ENST00000597811 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
XRCC1-206ENST00000597811 NDUFA6P56556 154 aa9.89□□□□□ -0.83
XRCC1-206ENST00000597811 SEC11AP67812 179 aa9.89□□□□□ -0.83
XRCC1-206ENST00000597811 PMCHL1Q16048 86 aa9.89□□□□□ -0.83
XRCC1-206ENST00000597811 OR10D4PQ8NGN7 298 aa9.89□□□□□ -0.83
XRCC1-206ENST00000597811 PKIGQ9Y2B9 76 aa9.89□□□□□ -0.83
XRCC1-206ENST00000597811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
XRCC1-206ENST00000597811 FAT3Q8TDW7 4589 aa9.89□□□□□ -0.83
XRCC1-206ENST00000597811 PKHD1L1Q86WI1 4243 aa9.89□□□□□ -0.83
XRCC1-206ENST00000597811 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.88□□□□□ -0.83
XRCC1-206ENST00000597811 CHTF8P0CG12 524 aa9.88□□□□□ -0.83
XRCC1-206ENST00000597811 A0A087WZ39 114 aa9.87□□□□□ -0.83
XRCC1-206ENST00000597811 HBDP02042 147 aa9.87□□□□□ -0.83
XRCC1-206ENST00000597811 HERVK_113P63121 156 aa9.87□□□□□ -0.83
XRCC1-206ENST00000597811 MAJINQ3KP22 176 aa9.87□□□□□ -0.83
XRCC1-206ENST00000597811 Q6ZRU5 148 aa9.87□□□□□ -0.83
XRCC1-206ENST00000597811 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
XRCC1-206ENST00000597811 PACRGQ96M98 296 aaPredicted RBP9.87□□□□□ -0.83
XRCC1-206ENST00000597811 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
XRCC1-206ENST00000597811 PANO1I0J062 215 aa9.86□□□□□ -0.83
XRCC1-206ENST00000597811 TRGC2P03986 189 aa9.86□□□□□ -0.83
XRCC1-206ENST00000597811 PRSS2P07478 247 aa9.86□□□□□ -0.83
XRCC1-206ENST00000597811 BAGE3Q86Y29 109 aa9.86□□□□□ -0.83
XRCC1-206ENST00000597811 URB1-AS1Q96HZ7 61 aa9.86□□□□□ -0.83
XRCC1-206ENST00000597811 TOMM7Q9P0U1 55 aa9.86□□□□□ -0.83
XRCC1-206ENST00000597811 NDUFA1O15239 70 aa9.85□□□□□ -0.83
XRCC1-206ENST00000597811 KRTAP10-4P60372 401 aaPredicted RBP9.85□□□□□ -0.83
XRCC1-206ENST00000597811 PMVKQ15126 192 aa9.85□□□□□ -0.83
XRCC1-206ENST00000597811 LINC00469Q8N7U9 141 aa9.85□□□□□ -0.83
XRCC1-206ENST00000597811 CST9LQ9H4G1 147 aa9.85□□□□□ -0.83
XRCC1-206ENST00000597811 GAGE2BQ13066 116 aa9.84□□□□□ -0.83
XRCC1-206ENST00000597811 A0A096LNI7 61 aa9.83□□□□□ -0.84
XRCC1-206ENST00000597811 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
XRCC1-206ENST00000597811 RPL18AQ02543 176 aaKnown RBP9.83□□□□□ -0.84
XRCC1-206ENST00000597811 SPACA4Q8TDM5 124 aa9.83□□□□□ -0.84
XRCC1-206ENST00000597811 CHCHD1Q96BP2 118 aaKnown RBP9.83□□□□□ -0.84
XRCC1-206ENST00000597811 CDKN2A-AS1Q9UH64 79 aa9.83□□□□□ -0.84
XRCC1-206ENST00000597811 A0A087WYN8 130 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 A0A096LNJ9 63 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 F8WDY8 70 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 HSBP1O75506 76 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 SCO1O75880 301 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 ATP5LO75964 103 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 LINC00474Q9P2X8 69 aa9.82□□□□□ -0.84
XRCC1-206ENST00000597811 TINCRA0A1B0GVN0 87 aa9.81□□□□□ -0.84
XRCC1-206ENST00000597811 COLCA2A8K830 154 aa9.81□□□□□ -0.84
XRCC1-206ENST00000597811 CKS1BP61024 79 aa9.81□□□□□ -0.84
XRCC1-206ENST00000597811 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
XRCC1-206ENST00000597811 STPG4Q8N801 248 aa9.81□□□□□ -0.84
XRCC1-206ENST00000597811 CIRBPQ14011 172 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms