RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 APOC3P02656 99 aa13.44□□□□□ -0.26
PNKP-209ENST00000596726 COX6A2Q02221 97 aa13.44□□□□□ -0.26
PNKP-209ENST00000596726 TMEM141Q96I45 108 aa13.44□□□□□ -0.26
PNKP-209ENST00000596726 ALKBH7Q9BT30 221 aaPredicted RBP13.44□□□□□ -0.26
PNKP-209ENST00000596726 MT-ND6P03923 174 aa13.43□□□□□ -0.26
PNKP-209ENST00000596726 PRSS3P2Q8NHM4 247 aa13.43□□□□□ -0.26
PNKP-209ENST00000596726 SPACA4Q8TDM5 124 aa13.43□□□□□ -0.26
PNKP-209ENST00000596726 NPSP0C0P6 89 aa13.42□□□□□ -0.26
PNKP-209ENST00000596726 CHTF8P0CG12 524 aa13.42□□□□□ -0.26
PNKP-209ENST00000596726 KRTAP10-4P60372 401 aaPredicted RBP13.42□□□□□ -0.26
PNKP-209ENST00000596726 SVBPQ8N300 66 aa13.42□□□□□ -0.26
PNKP-209ENST00000596726 MRPL18Q9H0U6 180 aaKnown RBP13.42□□□□□ -0.26
PNKP-209ENST00000596726 IGLV4-69A0A075B6H9 119 aa13.41□□□□□ -0.26
PNKP-209ENST00000596726 IGIPA6NJ69 53 aa13.41□□□□□ -0.26
PNKP-209ENST00000596726 SNAPINO95295 136 aa13.41□□□□□ -0.26
PNKP-209ENST00000596726 APOMO95445 188 aa13.41□□□□□ -0.26
PNKP-209ENST00000596726 SYCNQ0VAF6 134 aa13.41□□□□□ -0.26
PNKP-209ENST00000596726 CARD19Q96LW7 228 aa13.41□□□□□ -0.26
PNKP-209ENST00000596726 G0S2P27469 103 aa13.4□□□□□ -0.26
PNKP-209ENST00000596726 TEX43Q6ZNM6 134 aa13.4□□□□□ -0.26
PNKP-209ENST00000596726 LINC00173Q6ZV60 143 aa13.4□□□□□ -0.26
PNKP-209ENST00000596726 AMELXQ99217 191 aa13.4□□□□□ -0.26
PNKP-209ENST00000596726 A0A087WYN8 130 aa13.39□□□□□ -0.27
PNKP-209ENST00000596726 TGIF2-C20orf24A0A0A6YYL0 155 aa13.39□□□□□ -0.27
PNKP-209ENST00000596726 LINC01546A6NGU7 62 aa13.39□□□□□ -0.27
PNKP-209ENST00000596726 FABP9Q0Z7S8 132 aa13.39□□□□□ -0.27
PNKP-209ENST00000596726 LINC00242Q5T6M2 205 aa13.39□□□□□ -0.27
PNKP-209ENST00000596726 C2orf48Q96LS8 159 aa13.39□□□□□ -0.27
PNKP-209ENST00000596726 FLG2Q5D862 2391 aaPredicted RBP13.39□□□□□ -0.27
PNKP-209ENST00000596726 UBE2D1P51668 147 aa13.38□□□□□ -0.27
PNKP-209ENST00000596726 ZC2HC1BQ5TFG8 222 aa13.38□□□□□ -0.27
PNKP-209ENST00000596726 OR10D4PQ8NGN7 298 aa13.38□□□□□ -0.27
PNKP-209ENST00000596726 TOMM6Q96B49 74 aa13.38□□□□□ -0.27
PNKP-209ENST00000596726 Q6ZN92 141 aa13.37□□□□□ -0.27
PNKP-209ENST00000596726 Q6ZRU5 148 aa13.37□□□□□ -0.27
PNKP-209ENST00000596726 VCX2Q9H322 139 aa13.37□□□□□ -0.27
PNKP-209ENST00000596726 A0A096LNI7 61 aa13.36□□□□□ -0.27
PNKP-209ENST00000596726 SPAG11BQ08648 103 aa13.36□□□□□ -0.27
PNKP-209ENST00000596726 DPH3Q96FX2 82 aa13.36□□□□□ -0.27
PNKP-209ENST00000596726 TIMM17AQ99595 171 aa13.36□□□□□ -0.27
PNKP-209ENST00000596726 C2orf88Q9BSF0 95 aa13.36□□□□□ -0.27
PNKP-209ENST00000596726 PLAC8Q9NZF1 115 aa13.36□□□□□ -0.27
PNKP-209ENST00000596726 PKIGQ9Y2B9 76 aa13.36□□□□□ -0.27
PNKP-209ENST00000596726 MYCBP2O75592 4640 aa13.36□□□□□ -0.27
PNKP-209ENST00000596726 A0A087WZ39 114 aa13.35□□□□□ -0.27
PNKP-209ENST00000596726 IGKV2-24A0A0C4DH68 120 aa13.35□□□□□ -0.27
PNKP-209ENST00000596726 ORAOV1Q8WV07 137 aa13.35□□□□□ -0.27
PNKP-209ENST00000596726 CAMK2N2Q96S95 79 aa13.35□□□□□ -0.27
PNKP-209ENST00000596726 MAJINQ3KP22 176 aa13.34□□□□□ -0.27
PNKP-209ENST00000596726 FAM19A3Q7Z5A8 133 aa13.34□□□□□ -0.27
PNKP-209ENST00000596726 TRAPPC1Q9Y5R8 145 aa13.34□□□□□ -0.27
PNKP-209ENST00000596726 PAPPA-AS1Q5QFB9 102 aa13.33□□□□□ -0.28
PNKP-209ENST00000596726 ERASQ7Z444 233 aa13.33□□□□□ -0.28
PNKP-209ENST00000596726 F8WDY8 70 aa13.32□□□□□ -0.28
PNKP-209ENST00000596726 RPL37AP61513 92 aaKnown RBP13.32□□□□□ -0.28
PNKP-209ENST00000596726 LINC01561Q8N1V8 128 aa13.32□□□□□ -0.28
PNKP-209ENST00000596726 YPEL4Q96NS1 127 aa13.32□□□□□ -0.28
PNKP-209ENST00000596726 LINC00474Q9P2X8 69 aa13.32□□□□□ -0.28
PNKP-209ENST00000596726 PKHD1L1Q86WI1 4243 aa13.31□□□□□ -0.28
PNKP-209ENST00000596726 LINC01549A6NIU2 74 aa13.31□□□□□ -0.28
PNKP-209ENST00000596726 RNF151Q2KHN1 245 aa13.31□□□□□ -0.28
PNKP-209ENST00000596726 SCGB3A1Q96QR1 104 aa13.31□□□□□ -0.28
PNKP-209ENST00000596726 LOC107984640A0A0U1RRK4 108 aa13.3□□□□□ -0.28
PNKP-209ENST00000596726 KIAA0087Q14695 138 aa13.3□□□□□ -0.28
PNKP-209ENST00000596726 FA2HQ7L5A8 372 aa13.3□□□□□ -0.28
PNKP-209ENST00000596726 STPG4Q8N801 248 aa13.3□□□□□ -0.28
PNKP-209ENST00000596726 C18orf32Q8TCD1 76 aa13.29□□□□□ -0.28
PNKP-209ENST00000596726 MRPL35Q9NZE8 188 aaKnown RBP13.29□□□□□ -0.28
PNKP-209ENST00000596726 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.28□□□□□ -0.28
PNKP-209ENST00000596726 PTTG1IPP53801 180 aa13.28□□□□□ -0.28
PNKP-209ENST00000596726 SMCO4Q9NRQ5 59 aa13.28□□□□□ -0.28
PNKP-209ENST00000596726 NDUFA1O15239 70 aa13.27□□□□□ -0.29
PNKP-209ENST00000596726 URB1-AS1Q96HZ7 61 aa13.27□□□□□ -0.29
PNKP-209ENST00000596726 A0A0J9YXV3 536 aa13.26□□□□□ -0.29
PNKP-209ENST00000596726 SEC11AP67812 179 aa13.26□□□□□ -0.29
PNKP-209ENST00000596726 C10orf25Q5T742 122 aa13.26□□□□□ -0.29
PNKP-209ENST00000596726 HERVK_113P63121 156 aa13.25□□□□□ -0.29
PNKP-209ENST00000596726 GAGE2BQ13066 116 aa13.25□□□□□ -0.29
PNKP-209ENST00000596726 UNQ6190/PRO20217Q6UXQ8 127 aa13.25□□□□□ -0.29
PNKP-209ENST00000596726 A0A096LNJ9 63 aa13.24□□□□□ -0.29
PNKP-209ENST00000596726 LINC00614P0C842 121 aa13.24□□□□□ -0.29
PNKP-209ENST00000596726 C6orf48Q9UBA6 75 aa13.23□□□□□ -0.29
PNKP-209ENST00000596726 CDKN2A-AS1Q9UH64 79 aa13.23□□□□□ -0.29
PNKP-209ENST00000596726 TLX1NBP0CAT3 122 aa13.22□□□□□ -0.29
PNKP-209ENST00000596726 HNRNPA3P51991 378 aaKnown RBP13.22□□□□□ -0.29
PNKP-209ENST00000596726 C7orf33Q8WU49 177 aa13.22□□□□□ -0.29
PNKP-209ENST00000596726 CST9LQ9H4G1 147 aa13.22□□□□□ -0.29
PNKP-209ENST00000596726 GEMIN7Q9H840 131 aaKnown RBP13.22□□□□□ -0.29
PNKP-209ENST00000596726 DMBT1Q9UGM3 2413 aaPredicted RBP13.22□□□□□ -0.29
PNKP-209ENST00000596726 CBLN2Q8IUK8 224 aa13.21□□□□□ -0.29
PNKP-209ENST00000596726 TINCRA0A1B0GVN0 87 aa13.2□□□□□ -0.3
PNKP-209ENST00000596726 RPL18AQ02543 176 aaKnown RBP13.2□□□□□ -0.3
PNKP-209ENST00000596726 PMVKQ15126 192 aa13.2□□□□□ -0.3
PNKP-209ENST00000596726 A0A1W2PNN7 141 aa13.19□□□□□ -0.3
PNKP-209ENST00000596726 KRTAP29-1A8MX34 341 aaPredicted RBP13.19□□□□□ -0.3
PNKP-209ENST00000596726 C2orf82Q6UX34 121 aa13.19□□□□□ -0.3
PNKP-209ENST00000596726 LRP1Q07954 4544 aaKnown RBP13.19□□□□□ -0.3
PNKP-209ENST00000596726 FAT3Q8TDW7 4589 aa13.19□□□□□ -0.3
PNKP-209ENST00000596726 IGLV5-45A0A087WSX0 123 aa13.18□□□□□ -0.3
PNKP-209ENST00000596726 TRBV30A0A0K0K1B3 111 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms