RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 GAGE2EQ4V326 116 aa6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 FAM104BQ5XKR9 115 aa6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 GAGE2DQ9UEU5 116 aa6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 TCAPO15273 167 aa6.41□□□□□ -1.38
CHMP2A-202ENST00000596708 UNQ6190/PRO20217Q6UXQ8 127 aa6.41□□□□□ -1.38
CHMP2A-202ENST00000596708 FAM19A5Q7Z5A7 132 aaPredicted RBP6.41□□□□□ -1.38
CHMP2A-202ENST00000596708 C20orf78Q9BR46 151 aa6.41□□□□□ -1.38
CHMP2A-202ENST00000596708 IGHV3OR16-9A0A0B4J2B5 98 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 H0Y9J4 135 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 TNFRSF6BO95407 300 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 UBE2BP63146 152 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 HBBP68871 147 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 FAM74A3Q4VXF1 159 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 KRTAP11-1Q8IUC1 163 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 C6orf48Q9UBA6 75 aa6.4□□□□□ -1.38
CHMP2A-202ENST00000596708 TRBV24-1A0A075B6N3 115 aa6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 IFITM10A6NMD0 228 aa6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 TLX1NBP0CAT3 122 aa6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 RPL23P62829 140 aaKnown RBP6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 RPL32P62910 135 aaKnown RBP6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 ADIRFQ15847 76 aa6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 AKAP14Q86UN6 197 aa6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 SMIM2Q9BVW6 85 aa6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 SPANXA1Q9NS26 97 aa6.39□□□□□ -1.39
CHMP2A-202ENST00000596708 IGLV1-50A0A075B6I6 118 aa6.38□□□□□ -1.39
CHMP2A-202ENST00000596708 TGIF2-C20orf24A0A0A6YYL0 155 aa6.38□□□□□ -1.39
CHMP2A-202ENST00000596708 D6R8Y8 96 aa6.38□□□□□ -1.39
CHMP2A-202ENST00000596708 UBE2D1P51668 147 aa6.38□□□□□ -1.39
CHMP2A-202ENST00000596708 MRPS36P82909 103 aaKnown RBP6.38□□□□□ -1.39
CHMP2A-202ENST00000596708 FAM104AQ969W3 186 aa6.38□□□□□ -1.39
CHMP2A-202ENST00000596708 A0A1B0GW15 77 aa6.37□□□□□ -1.39
CHMP2A-202ENST00000596708 SMIM27A0A1W2PRY6 76 aa6.37□□□□□ -1.39
CHMP2A-202ENST00000596708 M0QXV9 152 aa6.37□□□□□ -1.39
CHMP2A-202ENST00000596708 MRPL54Q6P161 138 aaKnown RBP6.37□□□□□ -1.39
CHMP2A-202ENST00000596708 SMDT1Q9H4I9 107 aa6.37□□□□□ -1.39
CHMP2A-202ENST00000596708 hCG_2014768A0A024R1R8 64 aa6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 F8W036 122 aa6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 NPYP01303 97 aa6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 S100A8P05109 93 aa6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 RAB5AP20339 215 aa6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 IFI27P40305 119 aaPredicted RBP6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 PRR4Q16378 134 aa6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 PACRGQ96M98 296 aaPredicted RBP6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 NAT8Q9UHE5 227 aa6.36□□□□□ -1.39
CHMP2A-202ENST00000596708 TRBV30A0A0K0K1B3 111 aa6.35□□□□□ -1.39
CHMP2A-202ENST00000596708 KRTAP1-4P0C5Y4 121 aa6.35□□□□□ -1.39
CHMP2A-202ENST00000596708 KIAA0087Q14695 138 aa6.35□□□□□ -1.39
CHMP2A-202ENST00000596708 NDUFC2-KCTD14E9PQ53 114 aa6.34□□□□□ -1.39
CHMP2A-202ENST00000596708 PPBPP02775 128 aa6.34□□□□□ -1.39
CHMP2A-202ENST00000596708 RPL13AP40429 203 aaKnown RBP6.34□□□□□ -1.39
CHMP2A-202ENST00000596708 LINC00242Q5T6M2 205 aa6.34□□□□□ -1.39
CHMP2A-202ENST00000596708 C2orf82Q6UX34 121 aa6.34□□□□□ -1.39
CHMP2A-202ENST00000596708 KRTAP7-1Q8IUC3 87 aa6.34□□□□□ -1.39
CHMP2A-202ENST00000596708 C9orf129Q5T035 196 aaKnown RBP6.33□□□□□ -1.4
CHMP2A-202ENST00000596708 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
CHMP2A-202ENST00000596708 TMEM141Q96I45 108 aa6.33□□□□□ -1.4
CHMP2A-202ENST00000596708 PYGO1Q9Y3Y4 419 aa6.33□□□□□ -1.4
CHMP2A-202ENST00000596708 IGLV4-3A0A075B6K6 122 aa6.32□□□□□ -1.4
CHMP2A-202ENST00000596708 C9JQL5 133 aa6.32□□□□□ -1.4
CHMP2A-202ENST00000596708 PRSS2P07478 247 aa6.32□□□□□ -1.4
CHMP2A-202ENST00000596708 PEA15Q15121 130 aa6.32□□□□□ -1.4
CHMP2A-202ENST00000596708 TEX43Q6ZNM6 134 aa6.32□□□□□ -1.4
CHMP2A-202ENST00000596708 ORMDL3Q8N138 153 aa6.32□□□□□ -1.4
CHMP2A-202ENST00000596708 PRELID3AQ96N28 172 aa6.32□□□□□ -1.4
CHMP2A-202ENST00000596708 TOMM7Q9P0U1 55 aa6.32□□□□□ -1.4
CHMP2A-202ENST00000596708 LOC389332A0A1B0GUA5 103 aa6.31□□□□□ -1.4
CHMP2A-202ENST00000596708 A0A1B0GXF2 115 aa6.31□□□□□ -1.4
CHMP2A-202ENST00000596708 ZNF861PO60384 105 aa6.31□□□□□ -1.4
CHMP2A-202ENST00000596708 LINC00469Q8N7U9 141 aa6.31□□□□□ -1.4
CHMP2A-202ENST00000596708 C2orf88Q9BSF0 95 aa6.31□□□□□ -1.4
CHMP2A-202ENST00000596708 CARHSP1Q9Y2V2 147 aaKnown RBP6.31□□□□□ -1.4
CHMP2A-202ENST00000596708 TSPAN13O95857 204 aa6.3□□□□□ -1.4
CHMP2A-202ENST00000596708 CKS1BP61024 79 aa6.3□□□□□ -1.4
CHMP2A-202ENST00000596708 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
CHMP2A-202ENST00000596708 C6orf226Q5I0X4 101 aa6.3□□□□□ -1.4
CHMP2A-202ENST00000596708 ZC2HC1BQ5TFG8 222 aa6.3□□□□□ -1.4
CHMP2A-202ENST00000596708 Q6ZN92 141 aa6.3□□□□□ -1.4
CHMP2A-202ENST00000596708 LINC01561Q8N1V8 128 aa6.3□□□□□ -1.4
CHMP2A-202ENST00000596708 C22orf24Q9Y442 160 aa6.3□□□□□ -1.4
CHMP2A-202ENST00000596708 NUPR1O60356 82 aa6.29□□□□□ -1.4
CHMP2A-202ENST00000596708 LBHQ53QV2 105 aaPredicted RBP6.29□□□□□ -1.4
CHMP2A-202ENST00000596708 C2orf66Q6UXQ4 117 aa6.29□□□□□ -1.4
CHMP2A-202ENST00000596708 VCX2Q9H322 139 aa6.29□□□□□ -1.4
CHMP2A-202ENST00000596708 CYSLTR1Q9Y271 337 aa6.29□□□□□ -1.4
CHMP2A-202ENST00000596708 A0A0U1RQV1 116 aa6.28□□□□□ -1.4
CHMP2A-202ENST00000596708 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
CHMP2A-202ENST00000596708 ALKBH7Q9BT30 221 aaPredicted RBP6.28□□□□□ -1.4
CHMP2A-202ENST00000596708 CTDSP1Q9GZU7 261 aa6.28□□□□□ -1.4
CHMP2A-202ENST00000596708 MAP1LC3AQ9H492 121 aa6.28□□□□□ -1.4
CHMP2A-202ENST00000596708 XAGE1AQ9HD64 81 aa6.28□□□□□ -1.4
CHMP2A-202ENST00000596708 PRSS47A8MTI9 375 aa6.27□□□□□ -1.41
CHMP2A-202ENST00000596708 Q8IZM0 81 aa6.27□□□□□ -1.41
CHMP2A-202ENST00000596708 Q8N8P6 123 aa6.27□□□□□ -1.41
CHMP2A-202ENST00000596708 AMELXQ99217 191 aa6.27□□□□□ -1.41
CHMP2A-202ENST00000596708 LAMTOR2Q9Y2Q5 125 aa6.27□□□□□ -1.41
CHMP2A-202ENST00000596708 ORMDL2Q53FV1 153 aa6.26□□□□□ -1.41
CHMP2A-202ENST00000596708 LINC00173Q6ZV60 143 aa6.26□□□□□ -1.41
CHMP2A-202ENST00000596708 RPL28P46779 137 aaKnown RBP6.25□□□□□ -1.41
CHMP2A-202ENST00000596708 MRPL55Q7Z7F7 128 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms