RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 CHTF8P0CG12 524 aa7.12□□□□□ -1.27
VRK3-210ENST00000596121 COX6A2Q02221 97 aa7.12□□□□□ -1.27
VRK3-210ENST00000596121 COX19Q49B96 90 aa7.12□□□□□ -1.27
VRK3-210ENST00000596121 ORMDL2Q53FV1 153 aa7.12□□□□□ -1.27
VRK3-210ENST00000596121 LINC00242Q5T6M2 205 aa7.12□□□□□ -1.27
VRK3-210ENST00000596121 URB1-AS1Q96HZ7 61 aa7.12□□□□□ -1.27
VRK3-210ENST00000596121 CYSLTR1Q9Y271 337 aa7.12□□□□□ -1.27
VRK3-210ENST00000596121 IGHV3-64A0A075B6Q5 118 aa7.11□□□□□ -1.27
VRK3-210ENST00000596121 K7EMI3 77 aa7.11□□□□□ -1.27
VRK3-210ENST00000596121 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
VRK3-210ENST00000596121 PRSS3P2Q8NHM4 247 aa7.11□□□□□ -1.27
VRK3-210ENST00000596121 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
VRK3-210ENST00000596121 AMELXQ99217 191 aa7.11□□□□□ -1.27
VRK3-210ENST00000596121 TRAPPC1Q9Y5R8 145 aa7.11□□□□□ -1.27
VRK3-210ENST00000596121 IGLV4-69A0A075B6H9 119 aa7.1□□□□□ -1.27
VRK3-210ENST00000596121 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.1□□□□□ -1.27
VRK3-210ENST00000596121 UBE2D1P51668 147 aa7.1□□□□□ -1.27
VRK3-210ENST00000596121 CBLN2Q8IUK8 224 aa7.1□□□□□ -1.27
VRK3-210ENST00000596121 LINC00528Q8N1L1 170 aa7.1□□□□□ -1.27
VRK3-210ENST00000596121 TOMM6Q96B49 74 aa7.1□□□□□ -1.27
VRK3-210ENST00000596121 SMCO4Q9NRQ5 59 aa7.1□□□□□ -1.27
VRK3-210ENST00000596121 FLG2Q5D862 2391 aaPredicted RBP7.09□□□□□ -1.27
VRK3-210ENST00000596121 MALP21145 153 aa7.09□□□□□ -1.27
VRK3-210ENST00000596121 KRTAP10-4P60372 401 aaPredicted RBP7.09□□□□□ -1.27
VRK3-210ENST00000596121 MYCBP2O75592 4640 aa7.09□□□□□ -1.27
VRK3-210ENST00000596121 A0A096LNJ9 63 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 SYCNQ0VAF6 134 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 TEX43Q6ZNM6 134 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 Q6ZRU5 148 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 C18orf32Q8TCD1 76 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 SPACA4Q8TDM5 124 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 VCX2Q9H322 139 aa7.08□□□□□ -1.28
VRK3-210ENST00000596121 A0A087WZ39 114 aa7.07□□□□□ -1.28
VRK3-210ENST00000596121 A0A096LNI7 61 aa7.07□□□□□ -1.28
VRK3-210ENST00000596121 SCO1O75880 301 aa7.07□□□□□ -1.28
VRK3-210ENST00000596121 NPSP0C0P6 89 aa7.07□□□□□ -1.28
VRK3-210ENST00000596121 INAFM2P0DMQ5 153 aa7.07□□□□□ -1.28
VRK3-210ENST00000596121 ERASQ7Z444 233 aa7.07□□□□□ -1.28
VRK3-210ENST00000596121 CARD19Q96LW7 228 aa7.07□□□□□ -1.28
VRK3-210ENST00000596121 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
VRK3-210ENST00000596121 A0A087WYN8 130 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 SPAG11BQ08648 103 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 KIAA0087Q14695 138 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 C10orf25Q5T742 122 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 FA2HQ7L5A8 372 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 FAM19A3Q7Z5A8 133 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 ORAOV1Q8WV07 137 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 SCGB3A1Q96QR1 104 aa7.06□□□□□ -1.28
VRK3-210ENST00000596121 IGKV2-24A0A0C4DH68 120 aa7.05□□□□□ -1.28
VRK3-210ENST00000596121 A0A0J9YXV3 536 aa7.05□□□□□ -1.28
VRK3-210ENST00000596121 COLCA2A8K830 154 aa7.05□□□□□ -1.28
VRK3-210ENST00000596121 APOMO95445 188 aa7.05□□□□□ -1.28
VRK3-210ENST00000596121 Q6ZN92 141 aa7.05□□□□□ -1.28
VRK3-210ENST00000596121 OR10D4PQ8NGN7 298 aa7.05□□□□□ -1.28
VRK3-210ENST00000596121 CAMK2N2Q96S95 79 aa7.05□□□□□ -1.28
VRK3-210ENST00000596121 C2orf88Q9BSF0 95 aa7.05□□□□□ -1.28
VRK3-210ENST00000596121 LINC00614P0C842 121 aa7.04□□□□□ -1.28
VRK3-210ENST00000596121 G0S2P27469 103 aa7.04□□□□□ -1.28
VRK3-210ENST00000596121 PMCHL1Q16048 86 aa7.04□□□□□ -1.28
VRK3-210ENST00000596121 MAJINQ3KP22 176 aa7.04□□□□□ -1.28
VRK3-210ENST00000596121 DPH3Q96FX2 82 aa7.04□□□□□ -1.28
VRK3-210ENST00000596121 PLAC8Q9NZF1 115 aa7.04□□□□□ -1.28
VRK3-210ENST00000596121 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
VRK3-210ENST00000596121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
VRK3-210ENST00000596121 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
VRK3-210ENST00000596121 CST9LQ9H4G1 147 aa7.03□□□□□ -1.28
VRK3-210ENST00000596121 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
VRK3-210ENST00000596121 PLA2G1BP04054 148 aaKnown RBP7.02□□□□□ -1.29
VRK3-210ENST00000596121 PDZD11Q5EBL8 140 aa7.02□□□□□ -1.29
VRK3-210ENST00000596121 C2orf82Q6UX34 121 aa7.02□□□□□ -1.29
VRK3-210ENST00000596121 LINC01561Q8N1V8 128 aa7.02□□□□□ -1.29
VRK3-210ENST00000596121 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
VRK3-210ENST00000596121 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
VRK3-210ENST00000596121 TRGC2P03986 189 aa7.01□□□□□ -1.29
VRK3-210ENST00000596121 HNRNPA3P51991 378 aaKnown RBP7.01□□□□□ -1.29
VRK3-210ENST00000596121 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
VRK3-210ENST00000596121 GAGE2BQ13066 116 aa7.01□□□□□ -1.29
VRK3-210ENST00000596121 RNF151Q2KHN1 245 aa7.01□□□□□ -1.29
VRK3-210ENST00000596121 PAPPA-AS1Q5QFB9 102 aa7.01□□□□□ -1.29
VRK3-210ENST00000596121 STPG4Q8N801 248 aa7.01□□□□□ -1.29
VRK3-210ENST00000596121 MRPL35Q9NZE8 188 aaKnown RBP7.01□□□□□ -1.29
VRK3-210ENST00000596121 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
VRK3-210ENST00000596121 LOC107984640A0A0U1RRK4 108 aa7□□□□□ -1.29
VRK3-210ENST00000596121 A0A1W2PNN7 141 aa7□□□□□ -1.29
VRK3-210ENST00000596121 HERVK_113P63121 156 aa7□□□□□ -1.29
VRK3-210ENST00000596121 PMVKQ15126 192 aa7□□□□□ -1.29
VRK3-210ENST00000596121 HERC1Q15751 4861 aa7□□□□□ -1.29
VRK3-210ENST00000596121 IGLV5-45A0A087WSX0 123 aa6.99□□□□□ -1.29
VRK3-210ENST00000596121 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
VRK3-210ENST00000596121 LINC01549A6NIU2 74 aa6.99□□□□□ -1.29
VRK3-210ENST00000596121 F8WDY8 70 aa6.99□□□□□ -1.29
VRK3-210ENST00000596121 NDUFA1O15239 70 aa6.99□□□□□ -1.29
VRK3-210ENST00000596121 HBDP02042 147 aa6.99□□□□□ -1.29
VRK3-210ENST00000596121 RPL37AP61513 92 aaKnown RBP6.99□□□□□ -1.29
VRK3-210ENST00000596121 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
VRK3-210ENST00000596121 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
VRK3-210ENST00000596121 LINC00310P59036 64 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms