RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 INAFM2P0DMQ5 153 aa12.37□□□□□ -0.43
ARHGEF1-213ENST00000595897 MIR7-3HGQ8N6C7 128 aa12.37□□□□□ -0.43
ARHGEF1-213ENST00000595897 NOP10Q9NPE3 64 aaKnown RBP12.37□□□□□ -0.43
ARHGEF1-213ENST00000595897 NAV2Q8IVL1 2488 aa12.37□□□□□ -0.43
ARHGEF1-213ENST00000595897 DNAL4O96015 105 aa12.36□□□□□ -0.43
ARHGEF1-213ENST00000595897 C11orf44Q8N8P7 122 aa12.36□□□□□ -0.43
ARHGEF1-213ENST00000595897 SND1-IT1Q9HBX3 110 aa12.36□□□□□ -0.43
ARHGEF1-213ENST00000595897 EPG5Q9HCE0 2579 aa12.35□□□□□ -0.43
ARHGEF1-213ENST00000595897 FSHBP01225 129 aa12.35□□□□□ -0.43
ARHGEF1-213ENST00000595897 PF4P02776 101 aa12.35□□□□□ -0.43
ARHGEF1-213ENST00000595897 MALP21145 153 aa12.35□□□□□ -0.43
ARHGEF1-213ENST00000595897 LINC00158P58513 81 aa12.35□□□□□ -0.43
ARHGEF1-213ENST00000595897 JMJD1CQ15652 2540 aa12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 TRGV2A0A075B6R0 118 aa12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 A0A1W2PRX2 142 aa12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 IGHV4-31P0DP07 118 aa12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 FAM222AQ5U5X8 452 aa12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 SETD2Q9BYW2 2564 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF1-213ENST00000595897 RPL28P46779 137 aaKnown RBP12.33□□□□□ -0.43
ARHGEF1-213ENST00000595897 LRRK2Q5S007 2527 aa12.33□□□□□ -0.44
ARHGEF1-213ENST00000595897 TEX15Q9BXT5 2789 aa12.33□□□□□ -0.44
ARHGEF1-213ENST00000595897 C22orf24Q9Y442 160 aa12.33□□□□□ -0.44
ARHGEF1-213ENST00000595897 ABCA12Q86UK0 2595 aa12.32□□□□□ -0.44
ARHGEF1-213ENST00000595897 SONP18583 2426 aaKnown RBP12.32□□□□□ -0.44
ARHGEF1-213ENST00000595897 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
ARHGEF1-213ENST00000595897 FAM110AQ9BQ89 295 aa12.32□□□□□ -0.44
ARHGEF1-213ENST00000595897 TMEM126AQ9H061 195 aa12.32□□□□□ -0.44
ARHGEF1-213ENST00000595897 LOC100131303A0A0U1RQF7 123 aa12.31□□□□□ -0.44
ARHGEF1-213ENST00000595897 IGKV2-28A0A075B6P5 120 aa12.3□□□□□ -0.44
ARHGEF1-213ENST00000595897 IGKV2D-28P01615 120 aa12.3□□□□□ -0.44
ARHGEF1-213ENST00000595897 SMIM11BQ8TCY0 68 aa12.3□□□□□ -0.44
ARHGEF1-213ENST00000595897 FBN2P35556 2912 aa12.29□□□□□ -0.44
ARHGEF1-213ENST00000595897 OVOL2Q9BRP0 275 aa12.29□□□□□ -0.44
ARHGEF1-213ENST00000595897 IGSF10Q6WRI0 2623 aa12.29□□□□□ -0.44
ARHGEF1-213ENST00000595897 A0A087WYN8 130 aa12.29□□□□□ -0.44
ARHGEF1-213ENST00000595897 PFN2P35080 140 aa12.29□□□□□ -0.44
ARHGEF1-213ENST00000595897 SDIM1Q6ZPB5 146 aa12.29□□□□□ -0.44
ARHGEF1-213ENST00000595897 TRAV25A0A0B4J276 109 aa12.28□□□□□ -0.44
ARHGEF1-213ENST00000595897 C3orf22Q8N5N4 141 aa12.28□□□□□ -0.44
ARHGEF1-213ENST00000595897 PPDPFQ9H3Y8 114 aa12.28□□□□□ -0.44
ARHGEF1-213ENST00000595897 TRGV4A0A0C4DH28 118 aa12.28□□□□□ -0.44
ARHGEF1-213ENST00000595897 OR13C6PQ8NH95 151 aa12.27□□□□□ -0.44
ARHGEF1-213ENST00000595897 C14orf132Q9NPU4 83 aa12.27□□□□□ -0.44
ARHGEF1-213ENST00000595897 PIEZO1Q92508 2521 aa12.27□□□□□ -0.44
ARHGEF1-213ENST00000595897 ATP5G1P05496 136 aa12.27□□□□□ -0.45
ARHGEF1-213ENST00000595897 CXCL5P42830 114 aa12.27□□□□□ -0.45
ARHGEF1-213ENST00000595897 UQCRQO14949 82 aa12.26□□□□□ -0.45
ARHGEF1-213ENST00000595897 PAX4O43316 350 aa12.26□□□□□ -0.45
ARHGEF1-213ENST00000595897 CCL18P55774 89 aa12.26□□□□□ -0.45
ARHGEF1-213ENST00000595897 IGLV4-60A0A075B6I1 120 aa12.25□□□□□ -0.45
ARHGEF1-213ENST00000595897 CFAP161Q6P656 301 aa12.25□□□□□ -0.45
ARHGEF1-213ENST00000595897 C5orf38Q86SI9 138 aa12.25□□□□□ -0.45
ARHGEF1-213ENST00000595897 H0YGX0 51 aa12.25□□□□□ -0.45
ARHGEF1-213ENST00000595897 CCL24O00175 119 aa12.25□□□□□ -0.45
ARHGEF1-213ENST00000595897 RPL35AP18077 110 aaKnown RBP12.24□□□□□ -0.45
ARHGEF1-213ENST00000595897 LECT2O14960 151 aa12.24□□□□□ -0.45
ARHGEF1-213ENST00000595897 C9orf129Q5T035 196 aaKnown RBP12.24□□□□□ -0.45
ARHGEF1-213ENST00000595897 C16orf74Q96GX8 76 aa12.24□□□□□ -0.45
ARHGEF1-213ENST00000595897 C11orf68Q9H3H3 251 aaKnown RBP12.24□□□□□ -0.45
ARHGEF1-213ENST00000595897 TRBV6-4A0A1B0GX49 114 aa12.23□□□□□ -0.45
ARHGEF1-213ENST00000595897 ZFYVE26Q68DK2 2539 aa12.23□□□□□ -0.45
ARHGEF1-213ENST00000595897 IGHV3OR16-9A0A0B4J2B5 98 aa12.23□□□□□ -0.45
ARHGEF1-213ENST00000595897 WFDC10AQ9H1F0 79 aa12.23□□□□□ -0.45
ARHGEF1-213ENST00000595897 IBA57-AS1B1ANH7 110 aa12.22□□□□□ -0.45
ARHGEF1-213ENST00000595897 NF1P21359 2839 aa12.22□□□□□ -0.45
ARHGEF1-213ENST00000595897 NIPBLQ6KC79 2804 aaeCLIP12.21□□□□□ -0.45
ARHGEF1-213ENST00000595897 TRBV6-8A0A0A6YYG3 113 aa12.21□□□□□ -0.45
ARHGEF1-213ENST00000595897 PLA2G2AP14555 144 aa12.21□□□□□ -0.45
ARHGEF1-213ENST00000595897 LINC00526Q96FQ7 95 aa12.21□□□□□ -0.45
ARHGEF1-213ENST00000595897 C6orf226Q5I0X4 101 aa12.21□□□□□ -0.45
ARHGEF1-213ENST00000595897 LRRC75A-AS1Q8N1F1 130 aa12.21□□□□□ -0.45
ARHGEF1-213ENST00000595897 CCDC168Q8NDH2 2452 aa12.2□□□□□ -0.46
ARHGEF1-213ENST00000595897 IGKV3D-7A0A0C4DH55 119 aa12.2□□□□□ -0.46
ARHGEF1-213ENST00000595897 PLAC8L1A1L4L8 177 aa12.2□□□□□ -0.46
ARHGEF1-213ENST00000595897 SLPIP03973 132 aa12.2□□□□□ -0.46
ARHGEF1-213ENST00000595897 GIG44P09565 113 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF1-213ENST00000595897 ZNF462Q96JM2 2506 aa12.2□□□□□ -0.46
ARHGEF1-213ENST00000595897 A0A087WZ39 114 aa12.19□□□□□ -0.46
ARHGEF1-213ENST00000595897 NCR3O14931 201 aa12.19□□□□□ -0.46
ARHGEF1-213ENST00000595897 COX7CP15954 63 aa12.19□□□□□ -0.46
ARHGEF1-213ENST00000595897 KRTAP10-9P60411 292 aa12.19□□□□□ -0.46
ARHGEF1-213ENST00000595897 ATOX1O00244 68 aa12.18□□□□□ -0.46
ARHGEF1-213ENST00000595897 LINC00846Q9NV44 126 aa12.18□□□□□ -0.46
ARHGEF1-213ENST00000595897 SETXQ7Z333 2677 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-213ENST00000595897 CR1P17927 2039 aa12.17□□□□□ -0.46
ARHGEF1-213ENST00000595897 KLK5Q9Y337 293 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-213ENST00000595897 XCL1P47992 114 aa12.16□□□□□ -0.46
ARHGEF1-213ENST00000595897 DEFB113Q30KQ7 82 aa12.15□□□□□ -0.46
ARHGEF1-213ENST00000595897 FHL2Q14192 279 aa12.15□□□□□ -0.46
ARHGEF1-213ENST00000595897 ORMDL1Q9P0S3 153 aa12.15□□□□□ -0.46
ARHGEF1-213ENST00000595897 LINC00959A0A1B0GUT2 108 aa12.15□□□□□ -0.47
ARHGEF1-213ENST00000595897 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.47
ARHGEF1-213ENST00000595897 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
ARHGEF1-213ENST00000595897 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
ARHGEF1-213ENST00000595897 CMC4P56277 68 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF1-213ENST00000595897 FN1P02751 2386 aaKnown RBP12.14□□□□□ -0.47
ARHGEF1-213ENST00000595897 TMEM86BQ8N661 226 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 231.3 ms