RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 KRTAP4-5Q9BYR2 181 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 PCLOQ9Y6V0 5065 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 ABCA13Q86UQ4 5058 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 COLCA2A8K830 154 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 XCL1P47992 114 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 GNB1LQ9BYB4 327 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 MAP1LC3AQ9H492 121 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 LAMTOR2Q9Y2Q5 125 aa10.01□□□□□ -0.81
USE1-206ENST00000595101 CCL25O15444 150 aa10□□□□□ -0.81
USE1-206ENST00000595101 RAB5AP20339 215 aa10□□□□□ -0.81
USE1-206ENST00000595101 FOXI1Q12951 378 aa10□□□□□ -0.81
USE1-206ENST00000595101 RNF151Q2KHN1 245 aa10□□□□□ -0.81
USE1-206ENST00000595101 SMCO4Q9NRQ5 59 aa10□□□□□ -0.81
USE1-206ENST00000595101 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
USE1-206ENST00000595101 TSPAN13O95857 204 aa9.99□□□□□ -0.81
USE1-206ENST00000595101 IFI27P40305 119 aaPredicted RBP9.99□□□□□ -0.81
USE1-206ENST00000595101 SLPIP03973 132 aa9.98□□□□□ -0.81
USE1-206ENST00000595101 UBE2V1Q13404 147 aa9.98□□□□□ -0.81
USE1-206ENST00000595101 Q8N8P6 123 aa9.98□□□□□ -0.81
USE1-206ENST00000595101 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
USE1-206ENST00000595101 TRAV13-1A0A0B4J241 112 aa9.98□□□□□ -0.81
USE1-206ENST00000595101 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
USE1-206ENST00000595101 hDV102S1A0JD36 115 aa9.97□□□□□ -0.81
USE1-206ENST00000595101 VAMP3Q15836 100 aa9.97□□□□□ -0.81
USE1-206ENST00000595101 C14orf177Q52M58 125 aa9.97□□□□□ -0.81
USE1-206ENST00000595101 COL5A1-AS1Q5SY13 56 aa9.97□□□□□ -0.81
USE1-206ENST00000595101 TIMM21Q9BVV7 248 aa9.97□□□□□ -0.81
USE1-206ENST00000595101 MRPL18Q9H0U6 180 aaKnown RBP9.97□□□□□ -0.81
USE1-206ENST00000595101 HIGD2BQ4VC39 106 aa9.96□□□□□ -0.81
USE1-206ENST00000595101 OCIAD2Q56VL3 154 aa9.96□□□□□ -0.81
USE1-206ENST00000595101 CBLN2Q8IUK8 224 aa9.96□□□□□ -0.81
USE1-206ENST00000595101 SS18Q15532 418 aa9.95□□□□□ -0.82
USE1-206ENST00000595101 YPEL4Q96NS1 127 aa9.95□□□□□ -0.82
USE1-206ENST00000595101 SPANXA1Q9NS26 97 aa9.95□□□□□ -0.82
USE1-206ENST00000595101 JOSD1Q15040 202 aaPredicted RBP9.94□□□□□ -0.82
USE1-206ENST00000595101 ZC2HC1BQ5TFG8 222 aa9.94□□□□□ -0.82
USE1-206ENST00000595101 C2orf66Q6UXQ4 117 aa9.94□□□□□ -0.82
USE1-206ENST00000595101 BOD1L2Q8IYS8 172 aa9.94□□□□□ -0.82
USE1-206ENST00000595101 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
USE1-206ENST00000595101 SMR3BP02814 79 aaPredicted RBP9.93□□□□□ -0.82
USE1-206ENST00000595101 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
USE1-206ENST00000595101 Q6ZSA8 131 aa9.93□□□□□ -0.82
USE1-206ENST00000595101 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
USE1-206ENST00000595101 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
USE1-206ENST00000595101 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
USE1-206ENST00000595101 SMAGPQ0VAQ4 97 aa9.93□□□□□ -0.82
USE1-206ENST00000595101 TRAPPC1Q9Y5R8 145 aa9.93□□□□□ -0.82
USE1-206ENST00000595101 MT-ND6P03923 174 aa9.92□□□□□ -0.82
USE1-206ENST00000595101 C9orf163Q8N9P6 203 aa9.92□□□□□ -0.82
USE1-206ENST00000595101 PRO1933Q9H354 126 aa9.92□□□□□ -0.82
USE1-206ENST00000595101 ORMDL2Q53FV1 153 aa9.91□□□□□ -0.82
USE1-206ENST00000595101 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
USE1-206ENST00000595101 Q8N1X5 172 aa9.91□□□□□ -0.82
USE1-206ENST00000595101 PRSS3P2Q8NHM4 247 aa9.91□□□□□ -0.82
USE1-206ENST00000595101 CYSLTR1Q9Y271 337 aa9.91□□□□□ -0.82
USE1-206ENST00000595101 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
USE1-206ENST00000595101 PANO1I0J062 215 aa9.91□□□□□ -0.82
USE1-206ENST00000595101 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
USE1-206ENST00000595101 GVQW2A0A096LPI5 108 aaPredicted RBP9.89□□□□□ -0.83
USE1-206ENST00000595101 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
USE1-206ENST00000595101 IFITM10A6NMD0 228 aa9.89□□□□□ -0.83
USE1-206ENST00000595101 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
USE1-206ENST00000595101 LINC00173Q6ZV60 143 aa9.89□□□□□ -0.83
USE1-206ENST00000595101 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
USE1-206ENST00000595101 URB1-AS1Q96HZ7 61 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 TMEM141Q96I45 108 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 K7EMI3 77 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 COX7A2LO14548 114 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 COX6A2Q02221 97 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 SCXQ7RTU7 201 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 OR10D4PQ8NGN7 298 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 TOMM6Q96B49 74 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 AP5S1Q9NUS5 200 aa9.88□□□□□ -0.83
USE1-206ENST00000595101 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
USE1-206ENST00000595101 IGHV3OR16-9A0A0B4J2B5 98 aa9.87□□□□□ -0.83
USE1-206ENST00000595101 IGHV1-58A0A0C4DH39 117 aa9.87□□□□□ -0.83
USE1-206ENST00000595101 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
USE1-206ENST00000595101 MALP21145 153 aa9.86□□□□□ -0.83
USE1-206ENST00000595101 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
USE1-206ENST00000595101 TEX43Q6ZNM6 134 aa9.86□□□□□ -0.83
USE1-206ENST00000595101 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
USE1-206ENST00000595101 AMELXQ99217 191 aa9.86□□□□□ -0.83
USE1-206ENST00000595101 CHAC1Q9BUX1 264 aa9.86□□□□□ -0.83
USE1-206ENST00000595101 UBE2D1P51668 147 aa9.85□□□□□ -0.83
USE1-206ENST00000595101 FA2HQ7L5A8 372 aa9.85□□□□□ -0.83
USE1-206ENST00000595101 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.83
USE1-206ENST00000595101 CHTF8P0CG12 524 aa9.84□□□□□ -0.83
USE1-206ENST00000595101 CKS1BP61024 79 aa9.84□□□□□ -0.83
USE1-206ENST00000595101 A0A096LNJ9 63 aa9.83□□□□□ -0.84
USE1-206ENST00000595101 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.83□□□□□ -0.84
USE1-206ENST00000595101 PMCHL1Q16048 86 aa9.83□□□□□ -0.84
USE1-206ENST00000595101 HIST3H2BBQ8N257 126 aa9.83□□□□□ -0.84
USE1-206ENST00000595101 SCGB3A1Q96QR1 104 aa9.83□□□□□ -0.84
USE1-206ENST00000595101 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
USE1-206ENST00000595101 IGHV3-64A0A075B6Q5 118 aa9.83□□□□□ -0.84
USE1-206ENST00000595101 ZNF561-AS1K7EIQ3 104 aa9.83□□□□□ -0.84
USE1-206ENST00000595101 Q5VSD8 79 aa9.83□□□□□ -0.84
USE1-206ENST00000595101 TIMM17AQ99595 171 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms