RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 LOC389332A0A1B0GUA5 103 aa11.27□□□□□ -0.61
SHKBP1-204ENST00000594862 F8WDY8 70 aa11.27□□□□□ -0.61
SHKBP1-204ENST00000594862 J3QL48 77 aa11.27□□□□□ -0.61
SHKBP1-204ENST00000594862 MAJINQ3KP22 176 aa11.27□□□□□ -0.61
SHKBP1-204ENST00000594862 COMMD7Q86VX2 200 aa11.27□□□□□ -0.61
SHKBP1-204ENST00000594862 C7orf33Q8WU49 177 aa11.27□□□□□ -0.61
SHKBP1-204ENST00000594862 CYSLTR1Q9Y271 337 aa11.27□□□□□ -0.61
SHKBP1-204ENST00000594862 IGLV4-69A0A075B6H9 119 aa11.26□□□□□ -0.61
SHKBP1-204ENST00000594862 IGKV2-24A0A0C4DH68 120 aa11.26□□□□□ -0.61
SHKBP1-204ENST00000594862 KRTAP29-1A8MX34 341 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-204ENST00000594862 NPSP0C0P6 89 aa11.26□□□□□ -0.61
SHKBP1-204ENST00000594862 CAMK2N2Q96S95 79 aa11.26□□□□□ -0.61
SHKBP1-204ENST00000594862 TGIF2-C20orf24A0A0A6YYL0 155 aa11.25□□□□□ -0.61
SHKBP1-204ENST00000594862 COX19Q49B96 90 aa11.25□□□□□ -0.61
SHKBP1-204ENST00000594862 Q6ZN92 141 aa11.25□□□□□ -0.61
SHKBP1-204ENST00000594862 C5orf38Q86SI9 138 aa11.25□□□□□ -0.61
SHKBP1-204ENST00000594862 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
SHKBP1-204ENST00000594862 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
SHKBP1-204ENST00000594862 C2orf88Q9BSF0 95 aa11.25□□□□□ -0.61
SHKBP1-204ENST00000594862 A0A096LNI7 61 aa11.24□□□□□ -0.61
SHKBP1-204ENST00000594862 IGHV3OR16-9A0A0B4J2B5 98 aa11.24□□□□□ -0.61
SHKBP1-204ENST00000594862 LOC107984640A0A0U1RRK4 108 aa11.24□□□□□ -0.61
SHKBP1-204ENST00000594862 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
SHKBP1-204ENST00000594862 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
SHKBP1-204ENST00000594862 TEX43Q6ZNM6 134 aa11.24□□□□□ -0.61
SHKBP1-204ENST00000594862 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
SHKBP1-204ENST00000594862 IGLV4-3A0A075B6K6 122 aa11.23□□□□□ -0.61
SHKBP1-204ENST00000594862 OXTP01178 125 aa11.23□□□□□ -0.61
SHKBP1-204ENST00000594862 STPG4Q8N801 248 aa11.23□□□□□ -0.61
SHKBP1-204ENST00000594862 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-204ENST00000594862 RHEBQ15382 184 aa11.22□□□□□ -0.61
SHKBP1-204ENST00000594862 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
SHKBP1-204ENST00000594862 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
SHKBP1-204ENST00000594862 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
SHKBP1-204ENST00000594862 GNB1LQ9BYB4 327 aa11.22□□□□□ -0.61
SHKBP1-204ENST00000594862 MT-ND6P03923 174 aa11.21□□□□□ -0.61
SHKBP1-204ENST00000594862 Q6ZRU5 148 aa11.21□□□□□ -0.61
SHKBP1-204ENST00000594862 CARHSP1Q9Y2V2 147 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-204ENST00000594862 LINC01549A6NIU2 74 aa11.2□□□□□ -0.62
SHKBP1-204ENST00000594862 PTTG1IPP53801 180 aa11.2□□□□□ -0.62
SHKBP1-204ENST00000594862 C10orf91Q5T1B1 145 aa11.2□□□□□ -0.62
SHKBP1-204ENST00000594862 A0A087WZ39 114 aa11.19□□□□□ -0.62
SHKBP1-204ENST00000594862 NDUFA1O15239 70 aa11.19□□□□□ -0.62
SHKBP1-204ENST00000594862 VCX2Q9H322 139 aa11.19□□□□□ -0.62
SHKBP1-204ENST00000594862 MRPL35Q9NZE8 188 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-204ENST00000594862 LINC00242Q5T6M2 205 aa11.18□□□□□ -0.62
SHKBP1-204ENST00000594862 LINC01561Q8N1V8 128 aa11.18□□□□□ -0.62
SHKBP1-204ENST00000594862 UBE2D1P51668 147 aa11.17□□□□□ -0.62
SHKBP1-204ENST00000594862 SEC11AP67812 179 aa11.17□□□□□ -0.62
SHKBP1-204ENST00000594862 AMELXQ99217 191 aa11.17□□□□□ -0.62
SHKBP1-204ENST00000594862 TIMM17AQ99595 171 aa11.17□□□□□ -0.62
SHKBP1-204ENST00000594862 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
SHKBP1-204ENST00000594862 GAGE2BQ13066 116 aa11.16□□□□□ -0.62
SHKBP1-204ENST00000594862 KIAA1644Q3SXP7 199 aa11.16□□□□□ -0.62
SHKBP1-204ENST00000594862 RPS10P5Q9NQ39 176 aa11.16□□□□□ -0.62
SHKBP1-204ENST00000594862 NDUFA5Q16718 116 aa11.15□□□□□ -0.62
SHKBP1-204ENST00000594862 TOMM6Q96B49 74 aa11.15□□□□□ -0.62
SHKBP1-204ENST00000594862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-204ENST00000594862 RPL18AQ02543 176 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-204ENST00000594862 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
SHKBP1-204ENST00000594862 LINC00173Q6ZV60 143 aa11.13□□□□□ -0.63
SHKBP1-204ENST00000594862 ERASQ7Z444 233 aa11.13□□□□□ -0.63
SHKBP1-204ENST00000594862 ALKBH7Q9BT30 221 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-204ENST00000594862 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
SHKBP1-204ENST00000594862 HNRNPA3P51991 378 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-204ENST00000594862 HERVK_113P63121 156 aa11.12□□□□□ -0.63
SHKBP1-204ENST00000594862 PRR3P79522 188 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-204ENST00000594862 MRPL18Q9H0U6 180 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-204ENST00000594862 TRBV30A0A0K0K1B3 111 aa11.11□□□□□ -0.63
SHKBP1-204ENST00000594862 LINC01546A6NGU7 62 aa11.11□□□□□ -0.63
SHKBP1-204ENST00000594862 SNAPINO95295 136 aa11.11□□□□□ -0.63
SHKBP1-204ENST00000594862 FABP9Q0Z7S8 132 aa11.11□□□□□ -0.63
SHKBP1-204ENST00000594862 SMCO4Q9NRQ5 59 aa11.11□□□□□ -0.63
SHKBP1-204ENST00000594862 PRSS2P07478 247 aa11.1□□□□□ -0.63
SHKBP1-204ENST00000594862 FA2HQ7L5A8 372 aa11.1□□□□□ -0.63
SHKBP1-204ENST00000594862 SVBPQ8N300 66 aa11.1□□□□□ -0.63
SHKBP1-204ENST00000594862 PACRGQ96M98 296 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-204ENST00000594862 SCGB3A1Q96QR1 104 aa11.1□□□□□ -0.63
SHKBP1-204ENST00000594862 GEMIN7Q9H840 131 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-204ENST00000594862 KIAA0087Q14695 138 aa11.09□□□□□ -0.63
SHKBP1-204ENST00000594862 Q6ZRP5 223 aa11.09□□□□□ -0.63
SHKBP1-204ENST00000594862 APOC3P02656 99 aa11.08□□□□□ -0.64
SHKBP1-204ENST00000594862 UNQ6190/PRO20217Q6UXQ8 127 aa11.08□□□□□ -0.64
SHKBP1-204ENST00000594862 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
SHKBP1-204ENST00000594862 A0A0J9YXV3 536 aa11.07□□□□□ -0.64
SHKBP1-204ENST00000594862 C9orf116Q5BN46 136 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-204ENST00000594862 ZC2HC1BQ5TFG8 222 aa11.07□□□□□ -0.64
SHKBP1-204ENST00000594862 Q8IZM0 81 aa11.07□□□□□ -0.64
SHKBP1-204ENST00000594862 LRP1Q07954 4544 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-204ENST00000594862 CKS1BP61024 79 aa11.06□□□□□ -0.64
SHKBP1-204ENST00000594862 C10orf25Q5T742 122 aa11.06□□□□□ -0.64
SHKBP1-204ENST00000594862 SERTAD4-AS1Q5TG53 156 aa11.05□□□□□ -0.64
SHKBP1-204ENST00000594862 TRAPPC1Q9Y5R8 145 aa11.05□□□□□ -0.64
SHKBP1-204ENST00000594862 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
SHKBP1-204ENST00000594862 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
SHKBP1-204ENST00000594862 CXCL5P42830 114 aa11.04□□□□□ -0.64
SHKBP1-204ENST00000594862 C6orf226Q5I0X4 101 aa11.04□□□□□ -0.64
SHKBP1-204ENST00000594862 SPINK6Q6UWN8 80 aa11.04□□□□□ -0.64
SHKBP1-204ENST00000594862 TOMM7Q9P0U1 55 aa11.04□□□□□ -0.64
SHKBP1-204ENST00000594862 CDKN2A-AS1Q9UH64 79 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms