RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ANAPC16Q96DE5 110 aa14.68□□□□□ -0.06
LSM4-204ENST00000594828 MT-ND4LP03901 98 aa14.67□□□□□ -0.06
LSM4-204ENST00000594828 MT1HL1P0DM35 61 aa14.67□□□□□ -0.06
LSM4-204ENST00000594828 SPAG11BQ08648 103 aa14.66□□□□□ -0.06
LSM4-204ENST00000594828 IGHV3OR16-9A0A0B4J2B5 98 aa14.65□□□□□ -0.06
LSM4-204ENST00000594828 IFITM10A6NMD0 228 aa14.65□□□□□ -0.06
LSM4-204ENST00000594828 IFI27P40305 119 aaPredicted RBP14.65□□□□□ -0.06
LSM4-204ENST00000594828 OR10D4PQ8NGN7 298 aa14.65□□□□□ -0.06
LSM4-204ENST00000594828 LAMTOR2Q9Y2Q5 125 aa14.64□□□□□ -0.07
LSM4-204ENST00000594828 LOC389332A0A1B0GUA5 103 aa14.63□□□□□ -0.07
LSM4-204ENST00000594828 PRSS47A8MTI9 375 aa14.63□□□□□ -0.07
LSM4-204ENST00000594828 ORAOV1Q8WV07 137 aa14.63□□□□□ -0.07
LSM4-204ENST00000594828 PLA2G2DQ9UNK4 145 aa14.63□□□□□ -0.07
LSM4-204ENST00000594828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.62□□□□□ -0.07
LSM4-204ENST00000594828 RNF151Q2KHN1 245 aa14.62□□□□□ -0.07
LSM4-204ENST00000594828 MAP1LC3AQ9H492 121 aa14.62□□□□□ -0.07
LSM4-204ENST00000594828 PYGO1Q9Y3Y4 419 aa14.62□□□□□ -0.07
LSM4-204ENST00000594828 A0A0J9YXV3 536 aa14.6□□□□□ -0.07
LSM4-204ENST00000594828 A0A1W2PNN7 141 aa14.6□□□□□ -0.07
LSM4-204ENST00000594828 F8WDY8 70 aa14.6□□□□□ -0.07
LSM4-204ENST00000594828 RPL18AQ02543 176 aaKnown RBP14.6□□□□□ -0.07
LSM4-204ENST00000594828 Q6ZRP5 223 aa14.6□□□□□ -0.07
LSM4-204ENST00000594828 MRPL35Q9NZE8 188 aaKnown RBP14.59□□□□□ -0.07
LSM4-204ENST00000594828 IGLV4-3A0A075B6K6 122 aa14.58□□□□□ -0.08
LSM4-204ENST00000594828 TGIF2-C20orf24A0A0A6YYL0 155 aa14.58□□□□□ -0.08
LSM4-204ENST00000594828 TMEM141Q96I45 108 aa14.58□□□□□ -0.08
LSM4-204ENST00000594828 NDUFA1O15239 70 aa14.57□□□□□ -0.08
LSM4-204ENST00000594828 C9orf116Q5BN46 136 aaPredicted RBP14.57□□□□□ -0.08
LSM4-204ENST00000594828 CLLU1Q5K131 121 aa14.57□□□□□ -0.08
LSM4-204ENST00000594828 SPINK6Q6UWN8 80 aa14.57□□□□□ -0.08
LSM4-204ENST00000594828 Q8N8P6 123 aa14.57□□□□□ -0.08
LSM4-204ENST00000594828 HMCN2Q8NDA2 5059 aa14.57□□□□□ -0.08
LSM4-204ENST00000594828 LINC00242Q5T6M2 205 aa14.56□□□□□ -0.08
LSM4-204ENST00000594828 IMMP2LQ96T52 175 aa14.56□□□□□ -0.08
LSM4-204ENST00000594828 A0A087WZ39 114 aa14.55□□□□□ -0.08
LSM4-204ENST00000594828 TEX43Q6ZNM6 134 aa14.55□□□□□ -0.08
LSM4-204ENST00000594828 LINC01600Q96MT4 127 aa14.55□□□□□ -0.08
LSM4-204ENST00000594828 CYSLTR1Q9Y271 337 aa14.55□□□□□ -0.08
LSM4-204ENST00000594828 C10orf25Q5T742 122 aa14.54□□□□□ -0.08
LSM4-204ENST00000594828 C2orf66Q6UXQ4 117 aa14.54□□□□□ -0.08
LSM4-204ENST00000594828 UNQ6190/PRO20217Q6UXQ8 127 aa14.54□□□□□ -0.08
LSM4-204ENST00000594828 SRSF9Q13242 221 aaKnown RBP eCLIP14.53□□□□□ -0.08
LSM4-204ENST00000594828 ORMDL2Q53FV1 153 aa14.53□□□□□ -0.08
LSM4-204ENST00000594828 CTDSP1Q9GZU7 261 aa14.53□□□□□ -0.08
LSM4-204ENST00000594828 C2orf88Q9BSF0 95 aa14.52□□□□□ -0.09
LSM4-204ENST00000594828 K7EMI3 77 aa14.51□□□□□ -0.09
LSM4-204ENST00000594828 UBE2D1P51668 147 aa14.51□□□□□ -0.09
LSM4-204ENST00000594828 REG3GQ6UW15 175 aa14.51□□□□□ -0.09
LSM4-204ENST00000594828 Q6ZN92 141 aa14.51□□□□□ -0.09
LSM4-204ENST00000594828 C6orf48Q9UBA6 75 aa14.51□□□□□ -0.09
LSM4-204ENST00000594828 TLX1NBP0CAT3 122 aa14.5□□□□□ -0.09
LSM4-204ENST00000594828 KIAA0087Q14695 138 aa14.5□□□□□ -0.09
LSM4-204ENST00000594828 VCX2Q9H322 139 aa14.5□□□□□ -0.09
LSM4-204ENST00000594828 ZC2HC1BQ5TFG8 222 aa14.49□□□□□ -0.09
LSM4-204ENST00000594828 PHF5AQ7RTV0 110 aaKnown RBP14.49□□□□□ -0.09
LSM4-204ENST00000594828 AMELXQ99217 191 aa14.49□□□□□ -0.09
LSM4-204ENST00000594828 NXT2Q9NPJ8 142 aaKnown RBP14.49□□□□□ -0.09
LSM4-204ENST00000594828 MT-ND6P03923 174 aa14.48□□□□□ -0.09
LSM4-204ENST00000594828 UQCC3Q6UW78 93 aa14.48□□□□□ -0.09
LSM4-204ENST00000594828 PSORS1C2Q9UIG4 136 aa14.48□□□□□ -0.09
LSM4-204ENST00000594828 NPSP0C0P6 89 aa14.47□□□□□ -0.09
LSM4-204ENST00000594828 ADCYAP1P18509 176 aa14.47□□□□□ -0.09
LSM4-204ENST00000594828 LINC00173Q6ZV60 143 aa14.47□□□□□ -0.09
LSM4-204ENST00000594828 LINC01561Q8N1V8 128 aa14.47□□□□□ -0.09
LSM4-204ENST00000594828 TMEM218A2RU14 115 aa14.46□□□□□ -0.09
LSM4-204ENST00000594828 IGIPA6NJ69 53 aa14.46□□□□□ -0.09
LSM4-204ENST00000594828 GAGE2EQ4V326 116 aa14.46□□□□□ -0.09
LSM4-204ENST00000594828 GAGE2DQ9UEU5 116 aa14.46□□□□□ -0.09
LSM4-204ENST00000594828 G0S2P27469 103 aa14.45□□□□□ -0.1
LSM4-204ENST00000594828 TRBV30A0A0K0K1B3 111 aa14.44□□□□□ -0.1
LSM4-204ENST00000594828 FAM168BA1KXE4 195 aa14.44□□□□□ -0.1
LSM4-204ENST00000594828 KIAA1644Q3SXP7 199 aa14.44□□□□□ -0.1
LSM4-204ENST00000594828 C2orf82Q6UX34 121 aa14.44□□□□□ -0.1
LSM4-204ENST00000594828 TNXBP22105 4242 aa14.44□□□□□ -0.1
LSM4-204ENST00000594828 TRAV9-1A0A075B6T8 112 aa14.43□□□□□ -0.1
LSM4-204ENST00000594828 IFITM2Q01629 132 aa14.43□□□□□ -0.1
LSM4-204ENST00000594828 C1orf137Q5JT78 98 aa14.43□□□□□ -0.1
LSM4-204ENST00000594828 PACRGQ96M98 296 aaPredicted RBP14.43□□□□□ -0.1
LSM4-204ENST00000594828 KRTAP10-8P60410 259 aa14.42□□□□□ -0.1
LSM4-204ENST00000594828 PAPPA-AS1Q5QFB9 102 aa14.42□□□□□ -0.1
LSM4-204ENST00000594828 FAM19A3Q7Z5A8 133 aa14.42□□□□□ -0.1
LSM4-204ENST00000594828 FAM19A5Q7Z5A7 132 aaPredicted RBP14.41□□□□□ -0.1
LSM4-204ENST00000594828 PRSS2P07478 247 aa14.4□□□□□ -0.1
LSM4-204ENST00000594828 TOMM6Q96B49 74 aa14.4□□□□□ -0.1
LSM4-204ENST00000594828 TIMM17AQ99595 171 aa14.4□□□□□ -0.1
LSM4-204ENST00000594828 SEC11CQ9BY50 192 aa14.4□□□□□ -0.1
LSM4-204ENST00000594828 NDUFC2-KCTD14E9PQ53 114 aa14.39□□□□□ -0.11
LSM4-204ENST00000594828 SEC11AP67812 179 aa14.39□□□□□ -0.11
LSM4-204ENST00000594828 TOMM7Q9P0U1 55 aa14.39□□□□□ -0.11
LSM4-204ENST00000594828 S100PP25815 95 aa14.38□□□□□ -0.11
LSM4-204ENST00000594828 HERVK_113P63121 156 aa14.38□□□□□ -0.11
LSM4-204ENST00000594828 C6orf226Q5I0X4 101 aa14.38□□□□□ -0.11
LSM4-204ENST00000594828 CKS1BP61024 79 aa14.37□□□□□ -0.11
LSM4-204ENST00000594828 GNB1LQ9BYB4 327 aa14.37□□□□□ -0.11
LSM4-204ENST00000594828 ODF1Q14990 250 aa14.36□□□□□ -0.11
LSM4-204ENST00000594828 Q8IZM0 81 aa14.36□□□□□ -0.11
LSM4-204ENST00000594828 GEMIN7Q9H840 131 aaKnown RBP14.36□□□□□ -0.11
LSM4-204ENST00000594828 CDKN2A-AS1Q9UH64 79 aa14.36□□□□□ -0.11
LSM4-204ENST00000594828 IGLV7-43P04211 117 aa14.35□□□□□ -0.11
LSM4-204ENST00000594828 ERASQ7Z444 233 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms