RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 IGHV3OR16-9A0A0B4J2B5 98 aa17.25■□□□□ 0.35
SMAD4-213ENST00000591914 PKIGQ9Y2B9 76 aa17.25■□□□□ 0.35
SMAD4-213ENST00000591914 CARHSP1Q9Y2V2 147 aaKnown RBP17.25■□□□□ 0.35
SMAD4-213ENST00000591914 A0A096LNI7 61 aa17.24■□□□□ 0.35
SMAD4-213ENST00000591914 IGKV2-24A0A0C4DH68 120 aa17.24■□□□□ 0.35
SMAD4-213ENST00000591914 APOMO95445 188 aa17.24■□□□□ 0.35
SMAD4-213ENST00000591914 S100PP25815 95 aa17.24■□□□□ 0.35
SMAD4-213ENST00000591914 ORMDL2Q53FV1 153 aa17.24■□□□□ 0.35
SMAD4-213ENST00000591914 NXT2Q9NPJ8 142 aaKnown RBP17.24■□□□□ 0.35
SMAD4-213ENST00000591914 CYSLTR1Q9Y271 337 aa17.24■□□□□ 0.35
SMAD4-213ENST00000591914 MAJINQ3KP22 176 aa17.23■□□□□ 0.35
SMAD4-213ENST00000591914 C2orf66Q6UXQ4 117 aa17.23■□□□□ 0.35
SMAD4-213ENST00000591914 TMEM141Q96I45 108 aa17.23■□□□□ 0.35
SMAD4-213ENST00000591914 KIAA1644Q3SXP7 199 aa17.22■□□□□ 0.35
SMAD4-213ENST00000591914 C2orf48Q96LS8 159 aa17.22■□□□□ 0.35
SMAD4-213ENST00000591914 RHEBQ15382 184 aa17.21■□□□□ 0.35
SMAD4-213ENST00000591914 Q6ZRU5 148 aa17.21■□□□□ 0.35
SMAD4-213ENST00000591914 OR10D4PQ8NGN7 298 aa17.21■□□□□ 0.35
SMAD4-213ENST00000591914 GNB1LQ9BYB4 327 aa17.21■□□□□ 0.35
SMAD4-213ENST00000591914 LINC00474Q9P2X8 69 aa17.21■□□□□ 0.35
SMAD4-213ENST00000591914 SPAG11BQ08648 103 aa17.19■□□□□ 0.34
SMAD4-213ENST00000591914 CAMK2N2Q96S95 79 aa17.19■□□□□ 0.34
SMAD4-213ENST00000591914 STPG4Q8N801 248 aa17.18■□□□□ 0.34
SMAD4-213ENST00000591914 KRTAP29-1A8MX34 341 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-213ENST00000591914 NPSP0C0P6 89 aa17.17■□□□□ 0.34
SMAD4-213ENST00000591914 LINC00242Q5T6M2 205 aa17.17■□□□□ 0.34
SMAD4-213ENST00000591914 TEX43Q6ZNM6 134 aa17.17■□□□□ 0.34
SMAD4-213ENST00000591914 PKHD1L1Q86WI1 4243 aa17.17■□□□□ 0.34
SMAD4-213ENST00000591914 TGIF2-C20orf24A0A0A6YYL0 155 aa17.16■□□□□ 0.34
SMAD4-213ENST00000591914 IGIPA6NJ69 53 aa17.16■□□□□ 0.34
SMAD4-213ENST00000591914 COX19Q49B96 90 aa17.16■□□□□ 0.34
SMAD4-213ENST00000591914 ORAOV1Q8WV07 137 aa17.16■□□□□ 0.34
SMAD4-213ENST00000591914 RPS10P5Q9NQ39 176 aa17.16■□□□□ 0.34
SMAD4-213ENST00000591914 HNRNPA3P51991 378 aaKnown RBP17.15■□□□□ 0.34
SMAD4-213ENST00000591914 LINC00173Q6ZV60 143 aa17.15■□□□□ 0.34
SMAD4-213ENST00000591914 AMELXQ99217 191 aa17.15■□□□□ 0.34
SMAD4-213ENST00000591914 A0A087WZ39 114 aa17.14■□□□□ 0.33
SMAD4-213ENST00000591914 LOC107984640A0A0U1RRK4 108 aa17.14■□□□□ 0.33
SMAD4-213ENST00000591914 UBE2D1P51668 147 aa17.14■□□□□ 0.33
SMAD4-213ENST00000591914 Q6ZN92 141 aa17.14■□□□□ 0.33
SMAD4-213ENST00000591914 C2orf88Q9BSF0 95 aa17.14■□□□□ 0.33
SMAD4-213ENST00000591914 G0S2P27469 103 aa17.13■□□□□ 0.33
SMAD4-213ENST00000591914 PTTG1IPP53801 180 aa17.13■□□□□ 0.33
SMAD4-213ENST00000591914 ALKBH7Q9BT30 221 aaPredicted RBP17.13■□□□□ 0.33
SMAD4-213ENST00000591914 F8WDY8 70 aa17.12■□□□□ 0.33
SMAD4-213ENST00000591914 J3QL48 77 aa17.12■□□□□ 0.33
SMAD4-213ENST00000591914 MT-ND6P03923 174 aa17.12■□□□□ 0.33
SMAD4-213ENST00000591914 ZC2HC1BQ5TFG8 222 aa17.12■□□□□ 0.33
SMAD4-213ENST00000591914 C7orf33Q8WU49 177 aa17.12■□□□□ 0.33
SMAD4-213ENST00000591914 VCX2Q9H322 139 aa17.12■□□□□ 0.33
SMAD4-213ENST00000591914 RNF151Q2KHN1 245 aa17.11■□□□□ 0.33
SMAD4-213ENST00000591914 TOMM6Q96B49 74 aa17.11■□□□□ 0.33
SMAD4-213ENST00000591914 LRP1Q07954 4544 aaKnown RBP17.11■□□□□ 0.33
SMAD4-213ENST00000591914 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.1■□□□□ 0.33
SMAD4-213ENST00000591914 LINC01546A6NGU7 62 aa17.09■□□□□ 0.33
SMAD4-213ENST00000591914 TIMM17AQ99595 171 aa17.09■□□□□ 0.33
SMAD4-213ENST00000591914 MRPL18Q9H0U6 180 aaKnown RBP17.09■□□□□ 0.33
SMAD4-213ENST00000591914 MRPL35Q9NZE8 188 aaKnown RBP17.09■□□□□ 0.33
SMAD4-213ENST00000591914 GAGE2BQ13066 116 aa17.08■□□□□ 0.32
SMAD4-213ENST00000591914 FAM19A3Q7Z5A8 133 aa17.08■□□□□ 0.32
SMAD4-213ENST00000591914 PAPPA-AS1Q5QFB9 102 aa17.07■□□□□ 0.32
SMAD4-213ENST00000591914 LINC01561Q8N1V8 128 aa17.07■□□□□ 0.32
SMAD4-213ENST00000591914 A0A0J9YXV3 536 aa17.06■□□□□ 0.32
SMAD4-213ENST00000591914 NDUFA1O15239 70 aa17.06■□□□□ 0.32
SMAD4-213ENST00000591914 OXTP01178 125 aa17.06■□□□□ 0.32
SMAD4-213ENST00000591914 APOC3P02656 99 aa17.06■□□□□ 0.32
SMAD4-213ENST00000591914 FABP9Q0Z7S8 132 aa17.06■□□□□ 0.32
SMAD4-213ENST00000591914 KIAA0087Q14695 138 aa17.06■□□□□ 0.32
SMAD4-213ENST00000591914 FAT3Q8TDW7 4589 aa17.06■□□□□ 0.32
SMAD4-213ENST00000591914 C10orf25Q5T742 122 aa17.04■□□□□ 0.32
SMAD4-213ENST00000591914 ERASQ7Z444 233 aa17.04■□□□□ 0.32
SMAD4-213ENST00000591914 RPL18AQ02543 176 aaKnown RBP17.03■□□□□ 0.32
SMAD4-213ENST00000591914 UNQ6190/PRO20217Q6UXQ8 127 aa17.03■□□□□ 0.32
SMAD4-213ENST00000591914 SVBPQ8N300 66 aa17.03■□□□□ 0.32
SMAD4-213ENST00000591914 LINC01549A6NIU2 74 aa17.02■□□□□ 0.32
SMAD4-213ENST00000591914 SNAPINO95295 136 aa17.02■□□□□ 0.32
SMAD4-213ENST00000591914 NDUFA5Q16718 116 aa17.02■□□□□ 0.32
SMAD4-213ENST00000591914 SCGB3A1Q96QR1 104 aa17.02■□□□□ 0.32
SMAD4-213ENST00000591914 PRR3P79522 188 aaKnown RBP17.01■□□□□ 0.31
SMAD4-213ENST00000591914 C6orf48Q9UBA6 75 aa17.01■□□□□ 0.31
SMAD4-213ENST00000591914 SEC11AP67812 179 aa17■□□□□ 0.31
SMAD4-213ENST00000591914 A0A1W2PNN7 141 aa16.99■□□□□ 0.31
SMAD4-213ENST00000591914 TLX1NBP0CAT3 122 aa16.99■□□□□ 0.31
SMAD4-213ENST00000591914 HERVK_113P63121 156 aa16.99■□□□□ 0.31
SMAD4-213ENST00000591914 FA2HQ7L5A8 372 aa16.99■□□□□ 0.31
SMAD4-213ENST00000591914 C9orf116Q5BN46 136 aaPredicted RBP16.97■□□□□ 0.31
SMAD4-213ENST00000591914 TRAPPC1Q9Y5R8 145 aa16.97■□□□□ 0.31
SMAD4-213ENST00000591914 C2orf82Q6UX34 121 aa16.96■□□□□ 0.31
SMAD4-213ENST00000591914 Q6ZRP5 223 aa16.96■□□□□ 0.31
SMAD4-213ENST00000591914 SMCO4Q9NRQ5 59 aa16.96■□□□□ 0.31
SMAD4-213ENST00000591914 CDKN2A-AS1Q9UH64 79 aa16.96■□□□□ 0.31
SMAD4-213ENST00000591914 TRBV30A0A0K0K1B3 111 aa16.95■□□□□ 0.3
SMAD4-213ENST00000591914 GEMIN7Q9H840 131 aaKnown RBP16.95■□□□□ 0.3
SMAD4-213ENST00000591914 Q8IZM0 81 aa16.92■□□□□ 0.3
SMAD4-213ENST00000591914 C18orf32Q8TCD1 76 aa16.92■□□□□ 0.3
SMAD4-213ENST00000591914 PRSS2P07478 247 aa16.91■□□□□ 0.3
SMAD4-213ENST00000591914 URB1-AS1Q96HZ7 61 aa16.91■□□□□ 0.3
SMAD4-213ENST00000591914 CST9LQ9H4G1 147 aa16.91■□□□□ 0.3
SMAD4-213ENST00000591914 TINCRA0A1B0GVN0 87 aa16.9■□□□□ 0.3
SMAD4-213ENST00000591914 PACRGQ96M98 296 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms