RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SDIM1Q6ZPB5 146 aa6.5□□□□□ -1.37
BRCA1-227ENST00000591849 FA2HQ7L5A8 372 aa6.5□□□□□ -1.37
BRCA1-227ENST00000591849 LINC00526Q96FQ7 95 aa6.5□□□□□ -1.37
BRCA1-227ENST00000591849 SMCO4Q9NRQ5 59 aa6.5□□□□□ -1.37
BRCA1-227ENST00000591849 PKIGQ9Y2B9 76 aa6.5□□□□□ -1.37
BRCA1-227ENST00000591849 TRAPPC1Q9Y5R8 145 aa6.5□□□□□ -1.37
BRCA1-227ENST00000591849 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
BRCA1-227ENST00000591849 SLPIP03973 132 aa6.49□□□□□ -1.37
BRCA1-227ENST00000591849 INAFM2P0DMQ5 153 aa6.49□□□□□ -1.37
BRCA1-227ENST00000591849 SYCNQ0VAF6 134 aa6.49□□□□□ -1.37
BRCA1-227ENST00000591849 PAPPA-AS1Q5QFB9 102 aa6.49□□□□□ -1.37
BRCA1-227ENST00000591849 LINC00528Q8N1L1 170 aa6.49□□□□□ -1.37
BRCA1-227ENST00000591849 CIRBP-AS1Q8TBR5 109 aa6.49□□□□□ -1.37
BRCA1-227ENST00000591849 CARD19Q96LW7 228 aa6.49□□□□□ -1.37
BRCA1-227ENST00000591849 ALKBH7Q9BT30 221 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-227ENST00000591849 COX6A2Q02221 97 aa6.48□□□□□ -1.37
BRCA1-227ENST00000591849 SCGB3A1Q96QR1 104 aa6.48□□□□□ -1.37
BRCA1-227ENST00000591849 CAMK2N2Q96S95 79 aa6.48□□□□□ -1.37
BRCA1-227ENST00000591849 IGLV4-69A0A075B6H9 119 aa6.47□□□□□ -1.37
BRCA1-227ENST00000591849 LINC01549A6NIU2 74 aa6.47□□□□□ -1.37
BRCA1-227ENST00000591849 SPAG11BQ08648 103 aa6.47□□□□□ -1.37
BRCA1-227ENST00000591849 ORAOV1Q8WV07 137 aa6.47□□□□□ -1.37
BRCA1-227ENST00000591849 HERC1Q15751 4861 aa6.47□□□□□ -1.37
BRCA1-227ENST00000591849 IGKV2-24A0A0C4DH68 120 aa6.46□□□□□ -1.38
BRCA1-227ENST00000591849 NPSP0C0P6 89 aa6.46□□□□□ -1.38
BRCA1-227ENST00000591849 MAJINQ3KP22 176 aa6.46□□□□□ -1.38
BRCA1-227ENST00000591849 TOMM6Q96B49 74 aa6.46□□□□□ -1.38
BRCA1-227ENST00000591849 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-227ENST00000591849 IGHV3OR16-9A0A0B4J2B5 98 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 CHTF8P0CG12 524 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 LINC00242Q5T6M2 205 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 ZC2HC1BQ5TFG8 222 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 OR10D4PQ8NGN7 298 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 C2orf48Q96LS8 159 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 TIMM17AQ99595 171 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 GEMIN7Q9H840 131 aaKnown RBP6.45□□□□□ -1.38
BRCA1-227ENST00000591849 LINC00474Q9P2X8 69 aa6.45□□□□□ -1.38
BRCA1-227ENST00000591849 A0A087WYN8 130 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 LOC107984640A0A0U1RRK4 108 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 IGIPA6NJ69 53 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 PRSS2P07478 247 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 UBE2D1P51668 147 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 RAB5BP61020 215 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 SEC11AP67812 179 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 GAGE2BQ13066 116 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 Q6ZRU5 148 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 ERASQ7Z444 233 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 AMELXQ99217 191 aa6.44□□□□□ -1.38
BRCA1-227ENST00000591849 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-227ENST00000591849 A0A087WZ39 114 aa6.43□□□□□ -1.38
BRCA1-227ENST00000591849 F8WDY8 70 aa6.43□□□□□ -1.38
BRCA1-227ENST00000591849 PANO1I0J062 215 aa6.43□□□□□ -1.38
BRCA1-227ENST00000591849 NDUFA1O15239 70 aa6.43□□□□□ -1.38
BRCA1-227ENST00000591849 RPL37AP61513 92 aaKnown RBP6.43□□□□□ -1.38
BRCA1-227ENST00000591849 HERVK_113P63121 156 aa6.43□□□□□ -1.38
BRCA1-227ENST00000591849 PACRGQ96M98 296 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-227ENST00000591849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-227ENST00000591849 LINC00614P0C842 121 aa6.42□□□□□ -1.38
BRCA1-227ENST00000591849 NDUFA6P56556 154 aa6.42□□□□□ -1.38
BRCA1-227ENST00000591849 RPL18AQ02543 176 aaKnown RBP6.42□□□□□ -1.38
BRCA1-227ENST00000591849 STPG4Q8N801 248 aa6.42□□□□□ -1.38
BRCA1-227ENST00000591849 SPACA4Q8TDM5 124 aa6.42□□□□□ -1.38
BRCA1-227ENST00000591849 C7orf33Q8WU49 177 aa6.42□□□□□ -1.38
BRCA1-227ENST00000591849 TOMM7Q9P0U1 55 aa6.42□□□□□ -1.38
BRCA1-227ENST00000591849 DNAH8Q96JB1 4490 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 A0A096LNI7 61 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 LINC01546A6NGU7 62 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 CIRBPQ14011 172 aaKnown RBP6.41□□□□□ -1.38
BRCA1-227ENST00000591849 C6orf226Q5I0X4 101 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 LINC00173Q6ZV60 143 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 CBLN2Q8IUK8 224 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 LINC01561Q8N1V8 128 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 C18orf32Q8TCD1 76 aa6.41□□□□□ -1.38
BRCA1-227ENST00000591849 CKS1BP61024 79 aa6.4□□□□□ -1.38
BRCA1-227ENST00000591849 PMVKQ15126 192 aa6.4□□□□□ -1.38
BRCA1-227ENST00000591849 RNF151Q2KHN1 245 aa6.4□□□□□ -1.38
BRCA1-227ENST00000591849 UNQ6190/PRO20217Q6UXQ8 127 aa6.4□□□□□ -1.38
BRCA1-227ENST00000591849 LINC00469Q8N7U9 141 aa6.4□□□□□ -1.38
BRCA1-227ENST00000591849 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.38
BRCA1-227ENST00000591849 PLAC8Q9NZF1 115 aa6.4□□□□□ -1.38
BRCA1-227ENST00000591849 HBDP02042 147 aa6.39□□□□□ -1.39
BRCA1-227ENST00000591849 PTTG1IPP53801 180 aa6.39□□□□□ -1.39
BRCA1-227ENST00000591849 CST9LQ9H4G1 147 aa6.39□□□□□ -1.39
BRCA1-227ENST00000591849 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
BRCA1-227ENST00000591849 SRRM2Q9UQ35 2752 aaKnown RBP6.39□□□□□ -1.39
BRCA1-227ENST00000591849 TINCRA0A1B0GVN0 87 aa6.38□□□□□ -1.39
BRCA1-227ENST00000591849 ATP5LO75964 103 aa6.38□□□□□ -1.39
BRCA1-227ENST00000591849 PMCHL1Q16048 86 aa6.38□□□□□ -1.39
BRCA1-227ENST00000591849 FAM19A3Q7Z5A8 133 aa6.38□□□□□ -1.39
BRCA1-227ENST00000591849 BAGE3Q86Y29 109 aa6.38□□□□□ -1.39
BRCA1-227ENST00000591849 YPEL4Q96NS1 127 aa6.38□□□□□ -1.39
BRCA1-227ENST00000591849 CDKN2A-AS1Q9UH64 79 aa6.38□□□□□ -1.39
BRCA1-227ENST00000591849 FAT1Q14517 4588 aa6.37□□□□□ -1.39
BRCA1-227ENST00000591849 H3BRM9 83 aa6.37□□□□□ -1.39
BRCA1-227ENST00000591849 GAGE2EQ4V326 116 aa6.37□□□□□ -1.39
BRCA1-227ENST00000591849 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
BRCA1-227ENST00000591849 C2orf82Q6UX34 121 aa6.37□□□□□ -1.39
BRCA1-227ENST00000591849 GAGE2DQ9UEU5 116 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms