RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 A0A087WVE0 104 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 IGHV3-21A0A0B4J1V1 117 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 TRAV21A0A0B4J279 112 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 IGKV6-21A0A0C4DH24 114 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 TRBV6-1A0A0K0K1D8 114 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 CXorf51AA0A1B0GTR3 108 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 HMGN4O00479 90 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 NDUFA3O95167 84 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 PRB2P02812 416 aaPredicted RBP2.22□□□□□ -2.05
VMP1-212ENST00000591782 BAALC-AS2P0C853 105 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 GDF5OSQ5U4N7 250 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 Q8N814 137 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 C20orf203Q8NBC4 194 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 PRR15LQ9BU68 103 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 BPESC1Q9GZL8 116 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 FGF23Q9GZV9 251 aaPredicted RBP2.22□□□□□ -2.05
VMP1-212ENST00000591782 ORMDL1Q9P0S3 153 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 SNURFQ9Y675 71 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 LHFPL6Q9Y693 200 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 DSCAMO60469 2012 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 PTPN13Q12923 2485 aa2.22□□□□□ -2.05
VMP1-212ENST00000591782 DNAH14Q0VDD8 3507 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 IGLV3-9A0A075B6K5 115 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 A0A096LNJ9 63 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 TRBV6-6A0A0A6YYG2 114 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 IGHV3-43A0A0B4J1X8 118 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 TRAV12-3A0A0B4J271 114 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 IGHV5-10-1A0A0J9YXX1 117 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 LOC101927531A0A1B0GV80 90 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 H0YGX0 51 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 M0R1W7 72 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 ACACBO00763 2458 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 PSCAO43653 123 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 IGKV1-39P01597 117 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 IGKV1D-39P04432 117 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 IGHV3-30-3P0DP02 117 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 PRB4P10163 310 aaPredicted RBP2.21□□□□□ -2.06
VMP1-212ENST00000591782 RPL28P46779 137 aaKnown RBP2.21□□□□□ -2.06
VMP1-212ENST00000591782 TFF3Q07654 80 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 FAM229BQ4G0N7 80 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 Q5VV11 94 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 Q6ZR03 302 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 CAMK2N1Q7Z7J9 78 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 B9D2Q9BPU9 175 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 SND1-IT1Q9HBX3 110 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 LENEPQ9Y5L5 61 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 NCOR1O75376 2440 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 PCNX2A6NKB5 2137 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 MYO7BQ6PIF6 2116 aa2.21□□□□□ -2.06
VMP1-212ENST00000591782 MDC1Q14676 2089 aaKnown RBP2.21□□□□□ -2.06
VMP1-212ENST00000591782 PTPRZ1P23471 2315 aaPredicted RBP2.2□□□□□ -2.06
VMP1-212ENST00000591782 KALRNO60229 2985 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 FBN3Q75N90 2809 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 DMXL1Q9Y485 3027 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 IGHV3-49A0A0A0MS15 119 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 IGKV1-6A0A0C4DH72 117 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 LY6HO94772 140 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 CCL3P10147 92 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 COX6B1P14854 86 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 IL9P15248 144 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 C10orf113Q5VZT2 155 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 ENHOQ6UWT2 76 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 ZNF833PQ6ZTB9 187 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 LYPD6Q86Y78 171 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 ZFAND2AQ8N6M9 145 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 WFDC9Q8NEX5 89 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 LINC01560Q8TB33 94 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 KLF14Q8TD94 323 aaPredicted RBP2.2□□□□□ -2.06
VMP1-212ENST00000591782 FAM104AQ969W3 186 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 AMELXQ99217 191 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 Q9BRP9 147 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 CHCHD7Q9BUK0 85 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 LINC00574Q9H8X3 128 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 CDC42SE2Q9NRR3 84 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 ARHGAP32A7KAX9 2087 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 SPEGQ15772 3267 aa2.2□□□□□ -2.06
VMP1-212ENST00000591782 DOPEY1Q5JWR5 2465 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 ARFGEF3Q5TH69 2177 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 COL4A1P02462 1669 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 IGLV3-12A0A075B6K2 115 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 IGHV7-4-1A0A0J9YVY3 117 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 I3L3M4 83 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 FREM3P0C091 2139 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 CISD3P0C7P0 127 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 PI4KAP42356 2102 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 KRTAP21-3Q3LHN1 58 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 CASC10Q5T4H9 136 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 LINC01590Q5TEZ4 76 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 Q8IYB0 196 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 Q8N9L7 120 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 LINC00846Q9NV44 126 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 MRPL36Q9P0J6 103 aaKnown RBP2.19□□□□□ -2.06
VMP1-212ENST00000591782 C22orf24Q9Y442 160 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 ZFHX2Q9C0A1 2572 aaPredicted RBP2.19□□□□□ -2.06
VMP1-212ENST00000591782 MYO15AQ9UKN7 3530 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 FRYQ5TBA9 3013 aa2.19□□□□□ -2.06
VMP1-212ENST00000591782 TNRC6BQ9UPQ9 1833 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms