RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 TAGLN2P37802 199 aaKnown RBP3.46□□□□□ -1.86
LINC01539-202ENST00000589293 CTRLP40313 264 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 UBE2D1P51668 147 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 RGS21Q2M5E4 152 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 C1orf137Q5JT78 98 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 CD164L2Q6UWJ8 174 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 DIRC1Q969H9 104 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
LINC01539-202ENST00000589293 LINC00526Q96FQ7 95 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 BATF3Q9NR55 127 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 PSORS1C2Q9UIG4 136 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 C7orf77A4D0Y5 90 aa3.45□□□□□ -1.86
LINC01539-202ENST00000589293 HMSDA8MTL9 139 aa3.45□□□□□ -1.86
LINC01539-202ENST00000589293 A8MWL6 223 aa3.45□□□□□ -1.86
LINC01539-202ENST00000589293 SMLR1H3BR10 107 aa3.45□□□□□ -1.86
LINC01539-202ENST00000589293 GATCO43716 136 aaKnown RBP3.45□□□□□ -1.86
LINC01539-202ENST00000589293 A0A087WZ39 114 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 TRAV1-1A0A0B4J248 108 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 PPP1R17O96001 155 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 BCL2P10415 239 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 SRSF9Q13242 221 aaKnown RBP eCLIP3.44□□□□□ -1.86
LINC01539-202ENST00000589293 C9orf116Q5BN46 136 aaPredicted RBP3.44□□□□□ -1.86
LINC01539-202ENST00000589293 C2orf48Q96LS8 159 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 IMMP2LQ96T52 175 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 KIR2DL4Q99706 377 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 CNFNQ9BYD5 112 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 RNASE7Q9H1E1 156 aaKnown RBP3.44□□□□□ -1.86
LINC01539-202ENST00000589293 TMEM242Q9NWH2 141 aa3.44□□□□□ -1.86
LINC01539-202ENST00000589293 LRP2P98164 4655 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 TRAV13-1A0A0B4J241 112 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 TRBV6-5A0A0K0K1A5 114 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 RPL13AP40429 203 aaKnown RBP3.43□□□□□ -1.86
LINC01539-202ENST00000589293 CEBPGP53567 150 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 UBE2BP63146 152 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 SPAG11BQ08648 103 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 PRR4Q16378 134 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 MRPL52Q86TS9 123 aaKnown RBP3.43□□□□□ -1.86
LINC01539-202ENST00000589293 NUP35Q8NFH5 326 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 CDC42SE2Q9NRR3 84 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 RNF213Q63HN8 5207 aa3.43□□□□□ -1.86
LINC01539-202ENST00000589293 TRBV20OR9-2A0A075B6H5 130 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 IGLV1-50A0A075B6I6 118 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 A0A1B0GUT8 65 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 A0A1W2PNN7 141 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 F8WDY8 70 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 G3V3Q6 166 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 PPP1R2P9O14990 202 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 NDUFA1O15239 70 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 TCAPO15273 167 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 IGLV7-43P04211 117 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 CFC1BP0CG36 223 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 CFC1P0CG37 223 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 VPREB1P12018 145 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 PHF5AQ7RTV0 110 aaKnown RBP3.42□□□□□ -1.86
LINC01539-202ENST00000589293 C5orf38Q86SI9 138 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 OR10D4PQ8NGN7 298 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 OCC1Q8TAD7 63 aa3.42□□□□□ -1.86
LINC01539-202ENST00000589293 OPRPNQ99935 248 aaPredicted RBP3.42□□□□□ -1.86
LINC01539-202ENST00000589293 TRBV27A0A0K0K1C4 114 aa3.41□□□□□ -1.86
LINC01539-202ENST00000589293 H0Y9J4 135 aa3.41□□□□□ -1.86
LINC01539-202ENST00000589293 ESDP10768 282 aa3.41□□□□□ -1.86
LINC01539-202ENST00000589293 FOXA3P55318 350 aaPredicted RBP3.41□□□□□ -1.86
LINC01539-202ENST00000589293 RIGQ13278 110 aa3.41□□□□□ -1.86
LINC01539-202ENST00000589293 TMEM241Q24JQ0 296 aa3.41□□□□□ -1.86
LINC01539-202ENST00000589293 FAM19A5Q7Z5A7 132 aaPredicted RBP3.41□□□□□ -1.86
LINC01539-202ENST00000589293 ORAOV1Q8WV07 137 aa3.41□□□□□ -1.86
LINC01539-202ENST00000589293 TMEM191AQ9H0A3 160 aa3.41□□□□□ -1.86
LINC01539-202ENST00000589293 CSDC2Q9Y534 153 aaKnown RBP3.41□□□□□ -1.86
LINC01539-202ENST00000589293 TGIF2-C20orf24A0A0A6YYL0 155 aa3.4□□□□□ -1.87
LINC01539-202ENST00000589293 HIGD1CA8MV81 97 aa3.4□□□□□ -1.87
LINC01539-202ENST00000589293 TMEM250H0YL14 139 aa3.4□□□□□ -1.87
LINC01539-202ENST00000589293 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.4□□□□□ -1.87
LINC01539-202ENST00000589293 K7EN84 100 aa3.4□□□□□ -1.87
LINC01539-202ENST00000589293 RNASE13Q5GAN3 156 aaKnown RBP3.4□□□□□ -1.87
LINC01539-202ENST00000589293 FAM231DQ6ZW35 169 aa3.4□□□□□ -1.87
LINC01539-202ENST00000589293 SLC51BQ86UW2 128 aa3.4□□□□□ -1.87
LINC01539-202ENST00000589293 PACRGQ96M98 296 aaPredicted RBP3.4□□□□□ -1.87
LINC01539-202ENST00000589293 MRPL35Q9NZE8 188 aaKnown RBP3.4□□□□□ -1.87
LINC01539-202ENST00000589293 TNXBP22105 4242 aa3.39□□□□□ -1.87
LINC01539-202ENST00000589293 M0QXV9 152 aa3.39□□□□□ -1.87
LINC01539-202ENST00000589293 RAB4AP20338 218 aa3.39□□□□□ -1.87
LINC01539-202ENST00000589293 POLR2KP53803 58 aaKnown RBP3.39□□□□□ -1.87
LINC01539-202ENST00000589293 HBBP68871 147 aa3.39□□□□□ -1.87
LINC01539-202ENST00000589293 Q6ZUT4 128 aa3.39□□□□□ -1.87
LINC01539-202ENST00000589293 AMN1Q8IY45 258 aa3.39□□□□□ -1.87
LINC01539-202ENST00000589293 SMIM7Q9BQ49 75 aa3.39□□□□□ -1.87
LINC01539-202ENST00000589293 EIF5A2Q9GZV4 153 aaKnown RBP3.39□□□□□ -1.87
LINC01539-202ENST00000589293 UBE2D4Q9Y2X8 147 aa3.39□□□□□ -1.87
LINC01539-202ENST00000589293 ZNF727A8MUV8 499 aa3.38□□□□□ -1.87
LINC01539-202ENST00000589293 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
LINC01539-202ENST00000589293 S100A8P05109 93 aa3.38□□□□□ -1.87
LINC01539-202ENST00000589293 RAB5AP20339 215 aa3.38□□□□□ -1.87
LINC01539-202ENST00000589293 CKS2P33552 79 aa3.38□□□□□ -1.87
LINC01539-202ENST00000589293 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
LINC01539-202ENST00000589293 TIMM21Q9BVV7 248 aa3.38□□□□□ -1.87
LINC01539-202ENST00000589293 SPANXA1Q9NS26 97 aa3.38□□□□□ -1.87
LINC01539-202ENST00000589293 IGLV9-49A0A0B4J1Y8 123 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
LINC01539-202ENST00000589293 A0A1B0GW15 77 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms