RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 SIGLEC8Q9NYZ4 499 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 TRBV20-1A0A075B6N2 111 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 TRAV9-2A0A087WT02 112 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 A6NDN8 102 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 C3orf79P0CE67 100 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 CRISP2P16562 243 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 APOC4P55056 127 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 C1orf195Q5TG92 126 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 BAGE3Q86Y29 109 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 ZNRF2Q8NHG8 242 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 OSTCQ9NRP0 149 aa2.28□□□□□ -2.04
ZNF540-207ENST00000589285 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.05
ZNF540-207ENST00000589285 IGLV2-18A0A075B6J9 118 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 HBBP68871 147 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 HRCT1Q6UXD1 115 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 TMEM136Q6ZRR5 245 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 LINC00336Q6ZUF6 198 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 Q6ZUT4 128 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 MRPL53Q96EL3 112 aaKnown RBP2.27□□□□□ -2.05
ZNF540-207ENST00000589285 OVOL2Q9BRP0 275 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 PRADC1Q9BSG0 188 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 ST20Q9HBF5 79 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 SPCS1Q9Y6A9 102 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 A0A1B0GX51 115 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 TMEM262E9PQX1 116 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 NXPH4O95158 308 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 NPYP01303 97 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 APCSP02743 223 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 IFITM1P13164 125 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 POM121L12Q8N7R1 296 aa2.27□□□□□ -2.05
ZNF540-207ENST00000589285 SRRM2Q9UQ35 2752 aaKnown RBP2.27□□□□□ -2.05
ZNF540-207ENST00000589285 RBAKDNA6NC62 111 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 H3BUT2 72 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 M0R2N4 97 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 CRYGDP07320 174 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 FABP2P12104 132 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 IFI27P40305 119 aaPredicted RBP2.26□□□□□ -2.05
ZNF540-207ENST00000589285 RPS28P62857 69 aaKnown RBP2.26□□□□□ -2.05
ZNF540-207ENST00000589285 LINC01620Q4KN68 170 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 MRPL51Q4U2R6 128 aaKnown RBP2.26□□□□□ -2.05
ZNF540-207ENST00000589285 Q6AWC8 147 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 ATOH7Q8N100 152 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 CSNK1G2-AS1Q8NCQ2 148 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 TYMSOSQ8TAI1 123 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 IGLV10-54A0A075B6I4 117 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.26□□□□□ -2.05
ZNF540-207ENST00000589285 FAM236DA0A1B0GTK5 79 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 IGKV2-29A2NJV5 120 aaPredicted RBP2.26□□□□□ -2.05
ZNF540-207ENST00000589285 FAM236CP0DP71 79 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 RPL39P62891 51 aaKnown RBP2.26□□□□□ -2.05
ZNF540-207ENST00000589285 RIGQ13278 110 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 SLC25A29Q8N8R3 303 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 TMEM263Q8WUH6 116 aaKnown RBP2.26□□□□□ -2.05
ZNF540-207ENST00000589285 PRELID3AQ96N28 172 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 SPANXB1Q9NS25 103 aaPredicted RBP2.26□□□□□ -2.05
ZNF540-207ENST00000589285 SPANXCQ9NY87 97 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 SMIM27A0A1W2PRY6 76 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 H3BRM9 83 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 IGLC6P0CF74 106 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 SEC11AP67812 179 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 PMVKQ15126 192 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 LINC00173Q6ZV60 143 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 GATD1Q8NB37 220 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 C11orf72Q8NBR9 251 aa2.26□□□□□ -2.05
ZNF540-207ENST00000589285 DEFB131BA0A096LNP1 70 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 PLAC8L1A1L4L8 177 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 SDHAF1A6NFY7 115 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 F8W1H4 67 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 M0R2P5 195 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 ETDBQ3ZM63 59 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 LYRM7Q5U5X0 104 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 CFAP126Q5VTH2 177 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 C20orf78Q9BR46 151 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 GNB1LQ9BYB4 327 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 Q9HAA7 133 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 TP73-AS1Q9UF72 201 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 IGHV3-64A0A075B6Q5 118 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 K7EQD1 137 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 IGHV3-30P01768 117 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 IGHV3-33P01772 117 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 MT-ND6P03923 174 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 SPART-AS1P0CW21 52 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 IGHV3-30-3P0DP02 117 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 IGHV3-30-5P0DP03 117 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 FUSP35637 526 aaKnown RBP eCLIP2.25□□□□□ -2.05
ZNF540-207ENST00000589285 EGFEM1PQ0D2K5 195 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 C12orf74Q32Q52 190 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 SLC25A34Q6PIV7 304 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 ZNF493Q6ZR52 646 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 Q6ZVQ6 151 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 FAM231DQ6ZW35 169 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 SPATA12Q7Z6I5 190 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 Q8NAQ8 132 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 C18orf32Q8TCD1 76 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 FAM19A4Q96LR4 140 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 B9D2Q9BPU9 175 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 CHCHD5Q9BSY4 110 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 HHLA3Q9XRX5 114 aa2.25□□□□□ -2.05
ZNF540-207ENST00000589285 A0A1W2PPM0 123 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms