RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 KLK12Q9UKR0 248 aa17.66■□□□□ 0.42
SCAMP4-210ENST00000588555 STARD9Q9P2P6 4700 aa17.65■□□□□ 0.42
SCAMP4-210ENST00000588555 TTTY13Q9BZ97 58 aa17.64■□□□□ 0.41
SCAMP4-210ENST00000588555 DDTP30046 118 aa17.63■□□□□ 0.41
SCAMP4-210ENST00000588555 SLC25A34Q6PIV7 304 aa17.63■□□□□ 0.41
SCAMP4-210ENST00000588555 LYSTQ99698 3801 aa17.63■□□□□ 0.41
SCAMP4-210ENST00000588555 CCL25O15444 150 aa17.63■□□□□ 0.41
SCAMP4-210ENST00000588555 DNAH10OSP0CZ25 163 aa17.63■□□□□ 0.41
SCAMP4-210ENST00000588555 BOD1L2Q8IYS8 172 aa17.63■□□□□ 0.41
SCAMP4-210ENST00000588555 UPK3BQ9BT76 320 aa17.63■□□□□ 0.41
SCAMP4-210ENST00000588555 KLK5Q9Y337 293 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-210ENST00000588555 IGHV3OR16-9A0A0B4J2B5 98 aa17.62■□□□□ 0.41
SCAMP4-210ENST00000588555 SS18Q15532 418 aa17.62■□□□□ 0.41
SCAMP4-210ENST00000588555 SPINK8P0C7L1 97 aa17.61■□□□□ 0.41
SCAMP4-210ENST00000588555 ENHOQ6UWT2 76 aa17.61■□□□□ 0.41
SCAMP4-210ENST00000588555 TRAV8-3A0A0A6YYJ7 113 aa17.61■□□□□ 0.41
SCAMP4-210ENST00000588555 H3BRM9 83 aa17.61■□□□□ 0.41
SCAMP4-210ENST00000588555 TSPEAR-AS2P59090 65 aa17.61■□□□□ 0.41
SCAMP4-210ENST00000588555 IGHV3-64A0A075B6Q5 118 aa17.6■□□□□ 0.41
SCAMP4-210ENST00000588555 DLEU1O43261 78 aa17.6■□□□□ 0.41
SCAMP4-210ENST00000588555 LEPROTO15243 131 aa17.59■□□□□ 0.41
SCAMP4-210ENST00000588555 IGHV1-58A0A0C4DH39 117 aa17.58■□□□□ 0.41
SCAMP4-210ENST00000588555 SIVA1O15304 175 aa17.58■□□□□ 0.41
SCAMP4-210ENST00000588555 XCL1P47992 114 aa17.58■□□□□ 0.41
SCAMP4-210ENST00000588555 MAPKAPK5-AS1Q8N8E1 139 aa17.58■□□□□ 0.41
SCAMP4-210ENST00000588555 SMIM1B2RUZ4 78 aa17.58■□□□□ 0.4
SCAMP4-210ENST00000588555 IGLV5-39A0A0G2JS06 123 aa17.57■□□□□ 0.4
SCAMP4-210ENST00000588555 CHCHD10Q8WYQ3 142 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-210ENST00000588555 IGLV10-54A0A075B6I4 117 aa17.56■□□□□ 0.4
SCAMP4-210ENST00000588555 J3QQQ9 107 aa17.56■□□□□ 0.4
SCAMP4-210ENST00000588555 UBE2WQ96B02 151 aa17.56■□□□□ 0.4
SCAMP4-210ENST00000588555 DNAH1Q9P2D7 4330 aa17.55■□□□□ 0.4
SCAMP4-210ENST00000588555 A0A087WZ39 114 aa17.55■□□□□ 0.4
SCAMP4-210ENST00000588555 PLEKHB2Q96CS7 222 aa17.55■□□□□ 0.4
SCAMP4-210ENST00000588555 CRPP02741 224 aa17.54■□□□□ 0.4
SCAMP4-210ENST00000588555 CD164L2Q6UWJ8 174 aa17.54■□□□□ 0.4
SCAMP4-210ENST00000588555 C2orf91Q6ZV80 131 aa17.53■□□□□ 0.4
SCAMP4-210ENST00000588555 LINC00587B1AMM8 73 aa17.53■□□□□ 0.4
SCAMP4-210ENST00000588555 C5orf38Q86SI9 138 aa17.53■□□□□ 0.4
SCAMP4-210ENST00000588555 HNRNPA3P51991 378 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-210ENST00000588555 MIAQ16674 131 aa17.52■□□□□ 0.4
SCAMP4-210ENST00000588555 ZFAND6Q6FIF0 208 aa17.52■□□□□ 0.4
SCAMP4-210ENST00000588555 TRAV8-4A0A0B4J246 113 aa17.51■□□□□ 0.39
SCAMP4-210ENST00000588555 MYMXA0A1B0GTQ4 84 aa17.51■□□□□ 0.39
SCAMP4-210ENST00000588555 Q9H8V8 135 aa17.51■□□□□ 0.39
SCAMP4-210ENST00000588555 LGALS3P17931 250 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-210ENST00000588555 FOXI1Q12951 378 aa17.51■□□□□ 0.39
SCAMP4-210ENST00000588555 ZNF815PA8K554 130 aa17.5■□□□□ 0.39
SCAMP4-210ENST00000588555 MUC7Q8TAX7 377 aa17.5■□□□□ 0.39
SCAMP4-210ENST00000588555 UBE2DNLQ8IWF7 75 aa17.48■□□□□ 0.39
SCAMP4-210ENST00000588555 LINC01561Q8N1V8 128 aa17.48■□□□□ 0.39
SCAMP4-210ENST00000588555 GAGE12HA6NDE8 117 aa17.47■□□□□ 0.39
SCAMP4-210ENST00000588555 KRTAP26-1Q6PEX3 210 aa17.47■□□□□ 0.39
SCAMP4-210ENST00000588555 VPS13DQ5THJ4 4388 aa17.47■□□□□ 0.39
SCAMP4-210ENST00000588555 IBA57-AS1B1ANH7 110 aa17.46■□□□□ 0.39
SCAMP4-210ENST00000588555 COX7A2LO14548 114 aa17.46■□□□□ 0.39
SCAMP4-210ENST00000588555 CTAG1AP78358 180 aa17.45■□□□□ 0.38
SCAMP4-210ENST00000588555 WWC2-AS2Q96NR7 200 aa17.45■□□□□ 0.38
SCAMP4-210ENST00000588555 HIGD1BQ9P298 99 aa17.44■□□□□ 0.38
SCAMP4-210ENST00000588555 NDUFA12Q9UI09 145 aa17.44■□□□□ 0.38
SCAMP4-210ENST00000588555 C10orf126Q8N4M7 172 aa17.43■□□□□ 0.38
SCAMP4-210ENST00000588555 K7EP13 123 aa17.41■□□□□ 0.38
SCAMP4-210ENST00000588555 COX7B2Q8TF08 81 aa17.41■□□□□ 0.38
SCAMP4-210ENST00000588555 C1orf43Q9BWL3 253 aa17.4■□□□□ 0.38
SCAMP4-210ENST00000588555 NDUFA1O15239 70 aa17.4■□□□□ 0.38
SCAMP4-210ENST00000588555 SCGB1D4Q6XE38 83 aa17.39■□□□□ 0.37
SCAMP4-210ENST00000588555 KRTAP1-5Q9BYS1 174 aa17.39■□□□□ 0.37
SCAMP4-210ENST00000588555 Q9HAA7 133 aa17.39■□□□□ 0.37
SCAMP4-210ENST00000588555 ZNF625Q96I27 306 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-210ENST00000588555 MALP21145 153 aa17.38■□□□□ 0.37
SCAMP4-210ENST00000588555 TOMM7Q9P0U1 55 aa17.38■□□□□ 0.37
SCAMP4-210ENST00000588555 IGKV2D-24A0A075B6R9 120 aa17.36■□□□□ 0.37
SCAMP4-210ENST00000588555 A0A0J9YXY3 114 aa17.36■□□□□ 0.37
SCAMP4-210ENST00000588555 Q8IZM0 81 aa17.35■□□□□ 0.37
SCAMP4-210ENST00000588555 KIAA0087Q14695 138 aa17.35■□□□□ 0.37
SCAMP4-210ENST00000588555 ORAOV1Q8WV07 137 aa17.35■□□□□ 0.37
SCAMP4-210ENST00000588555 APOMO95445 188 aa17.32■□□□□ 0.36
SCAMP4-210ENST00000588555 HSD52Q0P140 79 aa17.31■□□□□ 0.36
SCAMP4-210ENST00000588555 C6orf226Q5I0X4 101 aa17.31■□□□□ 0.36
SCAMP4-210ENST00000588555 SNHG12Q9BXW3 62 aa17.3■□□□□ 0.36
SCAMP4-210ENST00000588555 PRSS2P07478 247 aa17.3■□□□□ 0.36
SCAMP4-210ENST00000588555 CASC10Q5T4H9 136 aa17.3■□□□□ 0.36
SCAMP4-210ENST00000588555 LITAFQ99732 161 aa17.3■□□□□ 0.36
SCAMP4-210ENST00000588555 HINT1P49773 126 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-210ENST00000588555 HERV-K104P63124 156 aa17.29■□□□□ 0.36
SCAMP4-210ENST00000588555 SPANXB1Q9NS25 103 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-210ENST00000588555 EREGO14944 169 aa17.28■□□□□ 0.36
SCAMP4-210ENST00000588555 RMI2Q96E14 147 aa17.28■□□□□ 0.36
SCAMP4-210ENST00000588555 C15orf56Q8N910 161 aa17.28■□□□□ 0.36
SCAMP4-210ENST00000588555 NBDYA0A0U1RRE5 68 aa17.27■□□□□ 0.35
SCAMP4-210ENST00000588555 M0R143 59 aa17.27■□□□□ 0.35
SCAMP4-210ENST00000588555 SPAG11BQ08648 103 aa17.27■□□□□ 0.35
SCAMP4-210ENST00000588555 TAL2Q16559 108 aa17.27■□□□□ 0.35
SCAMP4-210ENST00000588555 BVES-AS1Q5T3Y7 98 aa17.27■□□□□ 0.35
SCAMP4-210ENST00000588555 DNAH10Q8IVF4 4471 aa17.27■□□□□ 0.35
SCAMP4-210ENST00000588555 SFTA2Q6UW10 78 aa17.26■□□□□ 0.35
SCAMP4-210ENST00000588555 C2orf82Q6UX34 121 aa17.26■□□□□ 0.35
SCAMP4-210ENST00000588555 HIST1H4GQ99525 98 aa17.26■□□□□ 0.35
SCAMP4-210ENST00000588555 TTC32Q5I0X7 151 aa17.25■□□□□ 0.35
SCAMP4-210ENST00000588555 TIMM17BO60830 172 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms