RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PATE1Q8WXA2 126 aa1.98□□□□□ -2.09
TUBD1-208ENST00000588009 ARL11Q969Q4 196 aa1.98□□□□□ -2.09
TUBD1-208ENST00000588009 SDF2Q99470 211 aa1.98□□□□□ -2.09
TUBD1-208ENST00000588009 CST11Q9H112 138 aa1.98□□□□□ -2.09
TUBD1-208ENST00000588009 TPST1O60507 370 aa1.97□□□□□ -2.09
TUBD1-208ENST00000588009 IGF2P01344 180 aa1.97□□□□□ -2.09
TUBD1-208ENST00000588009 CXCL8P10145 99 aa1.97□□□□□ -2.09
TUBD1-208ENST00000588009 CIRBPQ14011 172 aaKnown RBP1.97□□□□□ -2.09
TUBD1-208ENST00000588009 FOXI2Q6ZQN5 318 aa1.97□□□□□ -2.09
TUBD1-208ENST00000588009 ZCCHC23Q6ZST2 131 aa1.97□□□□□ -2.09
TUBD1-208ENST00000588009 SLC35B3Q9H1N7 401 aa1.97□□□□□ -2.09
TUBD1-208ENST00000588009 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
TUBD1-208ENST00000588009 STARD9Q9P2P6 4700 aa1.96□□□□□ -2.09
TUBD1-208ENST00000588009 LY6G6CO95867 125 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 HMGA1P17096 107 aaKnown RBP1.96□□□□□ -2.1
TUBD1-208ENST00000588009 PCBD1P61457 104 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 LSM3P62310 102 aaKnown RBP1.96□□□□□ -2.1
TUBD1-208ENST00000588009 EMX2Q04743 252 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 CLLU1Q5K131 121 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 GLIPR1L1Q6UWM5 242 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 OR5AS1Q8N127 324 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 OR5AK2Q8NH90 309 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 CDC42SE1Q9NRR8 79 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 DNAH7Q8WXX0 4024 aa1.96□□□□□ -2.1
TUBD1-208ENST00000588009 LOC110117498A0A087WWA1 95 aa1.95□□□□□ -2.1
TUBD1-208ENST00000588009 C3orf85A0A1B0GTC6 90 aa1.95□□□□□ -2.1
TUBD1-208ENST00000588009 PITX3O75364 302 aa1.95□□□□□ -2.1
TUBD1-208ENST00000588009 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
TUBD1-208ENST00000588009 ASB16-AS1Q495Z4 193 aa1.95□□□□□ -2.1
TUBD1-208ENST00000588009 C10orf111Q8N326 155 aa1.95□□□□□ -2.1
TUBD1-208ENST00000588009 MPC1Q9Y5U8 109 aa1.95□□□□□ -2.1
TUBD1-208ENST00000588009 LRP2P98164 4655 aa1.95□□□□□ -2.1
TUBD1-208ENST00000588009 NEBP20929 6669 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 HUWE1Q7Z6Z7 4374 aaKnown RBP1.94□□□□□ -2.1
TUBD1-208ENST00000588009 C10orf142B7Z368 130 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 CKS2P33552 79 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 ETV6P41212 452 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 PLGLB1Q02325 96 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 FAM74A1Q5RGS3 127 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 C10orf105Q8TEF2 133 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 LINC00052Q96N35 136 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 ORMDL1Q9P0S3 153 aa1.94□□□□□ -2.1
TUBD1-208ENST00000588009 TRBV20-1A0A075B6N2 111 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 A0A096LNT2 108 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 LOC107984156A0A0G2JMH3 177 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 SPTY2D1-AS1A0A0U1RR47 76 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 LOC100130705A0A1B0GUX0 176 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 M0R2N4 97 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 GEMIN2O14893 280 aaKnown RBP1.93□□□□□ -2.1
TUBD1-208ENST00000588009 APOC1P02654 83 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 UBA52P62987 128 aaKnown RBP1.93□□□□□ -2.1
TUBD1-208ENST00000588009 IZUMO2Q6UXV1 221 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 ARL17AQ8IVW1 177 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 FAT2Q9NYQ8 4349 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
TUBD1-208ENST00000588009 DNAH10Q8IVF4 4471 aa1.92□□□□□ -2.1
TUBD1-208ENST00000588009 IGHV1-24A0A0C4DH33 117 aa1.92□□□□□ -2.1
TUBD1-208ENST00000588009 TRBV6-4A0A1B0GX49 114 aa1.92□□□□□ -2.1
TUBD1-208ENST00000588009 INE1O15225 51 aa1.92□□□□□ -2.1
TUBD1-208ENST00000588009 MPV17LQ2QL34 196 aa1.92□□□□□ -2.1
TUBD1-208ENST00000588009 ZNF431Q8TF32 576 aaPredicted RBP1.92□□□□□ -2.1
TUBD1-208ENST00000588009 TMEM191AQ9H0A3 160 aa1.92□□□□□ -2.1
TUBD1-208ENST00000588009 DYNC1H1Q14204 4646 aaKnown RBP1.92□□□□□ -2.1
TUBD1-208ENST00000588009 TRBV6-7A0A0A0MS04 114 aa1.91□□□□□ -2.1
TUBD1-208ENST00000588009 TRAV17A0A0B4J275 112 aa1.91□□□□□ -2.1
TUBD1-208ENST00000588009 PNMA8CA0A1B0GUJ8 204 aa1.91□□□□□ -2.1
TUBD1-208ENST00000588009 M0R2P5 195 aa1.91□□□□□ -2.1
TUBD1-208ENST00000588009 EDF1O60869 148 aaKnown RBP1.91□□□□□ -2.1
TUBD1-208ENST00000588009 CCSMST1Q4G0I0 132 aa1.91□□□□□ -2.1
TUBD1-208ENST00000588009 CASC2Q6XLA1 102 aa1.91□□□□□ -2.1
TUBD1-208ENST00000588009 Q6ZSA8 131 aa1.91□□□□□ -2.1
TUBD1-208ENST00000588009 GKN2Q86XP6 184 aa1.91□□□□□ -2.1
TUBD1-208ENST00000588009 CIB3Q96Q77 187 aaPredicted RBP1.91□□□□□ -2.1
TUBD1-208ENST00000588009 PLECQ15149 4684 aaKnown RBP1.9□□□□□ -2.11
TUBD1-208ENST00000588009 MIF4GDA9UHW6 222 aaKnown RBP1.9□□□□□ -2.11
TUBD1-208ENST00000588009 F8W1H4 67 aa1.9□□□□□ -2.11
TUBD1-208ENST00000588009 LYNX1P0DP58 116 aa1.9□□□□□ -2.11
TUBD1-208ENST00000588009 DPH3Q96FX2 82 aa1.9□□□□□ -2.11
TUBD1-208ENST00000588009 ALMS1Q8TCU4 4167 aa1.9□□□□□ -2.11
TUBD1-208ENST00000588009 A0A0G2JMM0 328 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 A0A1W2PPB8 328 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 KIR3DP1A8MWS1 328 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 FAM25AB3EWG3 89 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 FAM25CB3EWG5 89 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 FAM25GB3EWG6 89 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 RBP4P02753 201 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 MIC13Q5XKP0 118 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 C5orf17Q8NAS9 161 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 OBSCN-AS1Q96MR7 158 aa1.89□□□□□ -2.11
TUBD1-208ENST00000588009 SYNE2Q8WXH0 6885 aaKnown RBP1.89□□□□□ -2.11
TUBD1-208ENST00000588009 FAM92AA1XBS5 289 aa1.88□□□□□ -2.11
TUBD1-208ENST00000588009 IFITM5A6NNB3 132 aa1.88□□□□□ -2.11
TUBD1-208ENST00000588009 CDC42EP2O14613 210 aa1.88□□□□□ -2.11
TUBD1-208ENST00000588009 CCL25O15444 150 aa1.88□□□□□ -2.11
TUBD1-208ENST00000588009 PYYP10082 97 aa1.88□□□□□ -2.11
TUBD1-208ENST00000588009 COX7CP15954 63 aa1.88□□□□□ -2.11
TUBD1-208ENST00000588009 ZNF25P17030 456 aaPredicted RBP1.88□□□□□ -2.11
TUBD1-208ENST00000588009 SPRNQ5BIV9 151 aa1.88□□□□□ -2.11
TUBD1-208ENST00000588009 ATP11AUNQ6ZP68 121 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms