RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 SMDT1Q9H4I9 107 aa11.62□□□□□ -0.55
TRIM47-205ENST00000587774 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
TRIM47-205ENST00000587774 F8W036 122 aa11.61□□□□□ -0.55
TRIM47-205ENST00000587774 OPRPNQ99935 248 aaPredicted RBP11.61□□□□□ -0.55
TRIM47-205ENST00000587774 S100A8P05109 93 aa11.6□□□□□ -0.55
TRIM47-205ENST00000587774 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRIM47-205ENST00000587774 REG3GQ6UW15 175 aa11.6□□□□□ -0.55
TRIM47-205ENST00000587774 OR10D4PQ8NGN7 298 aa11.6□□□□□ -0.55
TRIM47-205ENST00000587774 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
TRIM47-205ENST00000587774 IGHV3OR16-9A0A0B4J2B5 98 aa11.59□□□□□ -0.55
TRIM47-205ENST00000587774 C9orf116Q5BN46 136 aaPredicted RBP11.59□□□□□ -0.55
TRIM47-205ENST00000587774 ORAOV1Q8WV07 137 aa11.59□□□□□ -0.55
TRIM47-205ENST00000587774 MRPS36P82909 103 aaKnown RBP11.58□□□□□ -0.56
TRIM47-205ENST00000587774 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
TRIM47-205ENST00000587774 PPBPP02775 128 aa11.57□□□□□ -0.56
TRIM47-205ENST00000587774 KRTAP10-8P60410 259 aa11.56□□□□□ -0.56
TRIM47-205ENST00000587774 RNF151Q2KHN1 245 aa11.56□□□□□ -0.56
TRIM47-205ENST00000587774 ORMDL3Q8N138 153 aa11.56□□□□□ -0.56
TRIM47-205ENST00000587774 MRPL35Q9NZE8 188 aaKnown RBP11.56□□□□□ -0.56
TRIM47-205ENST00000587774 PSORS1C2Q9UIG4 136 aa11.56□□□□□ -0.56
TRIM47-205ENST00000587774 RNF213Q63HN8 5207 aa11.56□□□□□ -0.56
TRIM47-205ENST00000587774 PHF5AQ7RTV0 110 aaKnown RBP11.55□□□□□ -0.56
TRIM47-205ENST00000587774 ATP5L2Q7Z4Y8 100 aa11.55□□□□□ -0.56
TRIM47-205ENST00000587774 NDUFA1O15239 70 aa11.54□□□□□ -0.56
TRIM47-205ENST00000587774 MT-ND6P03923 174 aa11.53□□□□□ -0.56
TRIM47-205ENST00000587774 IFI27P40305 119 aaPredicted RBP11.53□□□□□ -0.56
TRIM47-205ENST00000587774 C10orf25Q5T742 122 aa11.53□□□□□ -0.56
TRIM47-205ENST00000587774 PRELID3AQ96N28 172 aa11.53□□□□□ -0.56
TRIM47-205ENST00000587774 F8WDY8 70 aa11.52□□□□□ -0.57
TRIM47-205ENST00000587774 RAB5AP20339 215 aa11.52□□□□□ -0.57
TRIM47-205ENST00000587774 TMEM136Q6ZRR5 245 aa11.52□□□□□ -0.57
TRIM47-205ENST00000587774 IGLV4-3A0A075B6K6 122 aa11.51□□□□□ -0.57
TRIM47-205ENST00000587774 TGIF2-C20orf24A0A0A6YYL0 155 aa11.51□□□□□ -0.57
TRIM47-205ENST00000587774 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
TRIM47-205ENST00000587774 IMMP2LQ96T52 175 aa11.51□□□□□ -0.57
TRIM47-205ENST00000587774 C6orf48Q9UBA6 75 aa11.51□□□□□ -0.57
TRIM47-205ENST00000587774 FAM168BA1KXE4 195 aa11.5□□□□□ -0.57
TRIM47-205ENST00000587774 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
TRIM47-205ENST00000587774 C1orf137Q5JT78 98 aa11.5□□□□□ -0.57
TRIM47-205ENST00000587774 PYGO1Q9Y3Y4 419 aa11.5□□□□□ -0.57
TRIM47-205ENST00000587774 A0A087WZ39 114 aa11.49□□□□□ -0.57
TRIM47-205ENST00000587774 LINC00242Q5T6M2 205 aa11.49□□□□□ -0.57
TRIM47-205ENST00000587774 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
TRIM47-205ENST00000587774 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
TRIM47-205ENST00000587774 KIAA0087Q14695 138 aa11.48□□□□□ -0.57
TRIM47-205ENST00000587774 PRSS47A8MTI9 375 aa11.47□□□□□ -0.57
TRIM47-205ENST00000587774 FAM19A5Q7Z5A7 132 aaPredicted RBP11.47□□□□□ -0.57
TRIM47-205ENST00000587774 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
TRIM47-205ENST00000587774 LAMTOR2Q9Y2Q5 125 aa11.47□□□□□ -0.57
TRIM47-205ENST00000587774 PNRC1Q12796 327 aaPredicted RBP11.46□□□□□ -0.57
TRIM47-205ENST00000587774 GAGE2EQ4V326 116 aa11.46□□□□□ -0.57
TRIM47-205ENST00000587774 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
TRIM47-205ENST00000587774 KRTAP11-1Q8IUC1 163 aa11.46□□□□□ -0.57
TRIM47-205ENST00000587774 GAGE2DQ9UEU5 116 aa11.46□□□□□ -0.57
TRIM47-205ENST00000587774 UBE2D1P51668 147 aa11.45□□□□□ -0.58
TRIM47-205ENST00000587774 LPAP08519 4548 aa11.44□□□□□ -0.58
TRIM47-205ENST00000587774 IGLV7-43P04211 117 aa11.44□□□□□ -0.58
TRIM47-205ENST00000587774 ZC2HC1BQ5TFG8 222 aa11.44□□□□□ -0.58
TRIM47-205ENST00000587774 C2orf82Q6UX34 121 aa11.44□□□□□ -0.58
TRIM47-205ENST00000587774 LINC00173Q6ZV60 143 aa11.44□□□□□ -0.58
TRIM47-205ENST00000587774 KRTAP7-1Q8IUC3 87 aa11.44□□□□□ -0.58
TRIM47-205ENST00000587774 Q8N8P6 123 aa11.44□□□□□ -0.58
TRIM47-205ENST00000587774 CYSLTR1Q9Y271 337 aa11.44□□□□□ -0.58
TRIM47-205ENST00000587774 C2orf66Q6UXQ4 117 aa11.43□□□□□ -0.58
TRIM47-205ENST00000587774 ANAPC16Q96DE5 110 aa11.43□□□□□ -0.58
TRIM47-205ENST00000587774 C2orf88Q9BSF0 95 aa11.43□□□□□ -0.58
TRIM47-205ENST00000587774 TRBV30A0A0K0K1B3 111 aa11.42□□□□□ -0.58
TRIM47-205ENST00000587774 MT-ND4LP03901 98 aa11.42□□□□□ -0.58
TRIM47-205ENST00000587774 M0QXV9 152 aa11.41□□□□□ -0.58
TRIM47-205ENST00000587774 Q6ZN92 141 aa11.41□□□□□ -0.58
TRIM47-205ENST00000587774 DIRC1Q969H9 104 aa11.41□□□□□ -0.58
TRIM47-205ENST00000587774 AMELXQ99217 191 aa11.41□□□□□ -0.58
TRIM47-205ENST00000587774 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.58
TRIM47-205ENST00000587774 ORMDL2Q53FV1 153 aa11.4□□□□□ -0.58
TRIM47-205ENST00000587774 LINC01561Q8N1V8 128 aa11.4□□□□□ -0.58
TRIM47-205ENST00000587774 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
TRIM47-205ENST00000587774 PACRGQ96M98 296 aaPredicted RBP11.39□□□□□ -0.59
TRIM47-205ENST00000587774 H0Y9J4 135 aa11.38□□□□□ -0.59
TRIM47-205ENST00000587774 VCX2Q9H322 139 aa11.38□□□□□ -0.59
TRIM47-205ENST00000587774 IGIPA6NJ69 53 aa11.37□□□□□ -0.59
TRIM47-205ENST00000587774 K7EMI3 77 aa11.37□□□□□ -0.59
TRIM47-205ENST00000587774 UBE2BP63146 152 aa11.37□□□□□ -0.59
TRIM47-205ENST00000587774 PRR26Q8N8Z3 221 aa11.37□□□□□ -0.59
TRIM47-205ENST00000587774 TOMM7Q9P0U1 55 aa11.37□□□□□ -0.59
TRIM47-205ENST00000587774 PRSS2P07478 247 aa11.36□□□□□ -0.59
TRIM47-205ENST00000587774 NPSP0C0P6 89 aa11.36□□□□□ -0.59
TRIM47-205ENST00000587774 RAB14P61106 215 aa11.36□□□□□ -0.59
TRIM47-205ENST00000587774 FAM19A3Q7Z5A8 133 aa11.36□□□□□ -0.59
TRIM47-205ENST00000587774 CTDSP1Q9GZU7 261 aa11.36□□□□□ -0.59
TRIM47-205ENST00000587774 NXT2Q9NPJ8 142 aaKnown RBP11.36□□□□□ -0.59
TRIM47-205ENST00000587774 CKS1BP61024 79 aa11.34□□□□□ -0.59
TRIM47-205ENST00000587774 Q8IZM0 81 aa11.34□□□□□ -0.59
TRIM47-205ENST00000587774 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
TRIM47-205ENST00000587774 KRTAP1-4P0C5Y4 121 aa11.32□□□□□ -0.6
TRIM47-205ENST00000587774 HERVK_113P63121 156 aa11.32□□□□□ -0.6
TRIM47-205ENST00000587774 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
TRIM47-205ENST00000587774 TIMM17AQ99595 171 aa11.32□□□□□ -0.6
TRIM47-205ENST00000587774 ALKBH7Q9BT30 221 aaPredicted RBP11.32□□□□□ -0.6
TRIM47-205ENST00000587774 ADCYAP1P18509 176 aa11.31□□□□□ -0.6
TRIM47-205ENST00000587774 KIAA1644Q3SXP7 199 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms