RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 IFITM10A6NMD0 228 aa10.06□□□□□ -0.8
CXXC1-209ENST00000587342 PTTG1IPP53801 180 aa10.06□□□□□ -0.8
CXXC1-209ENST00000587342 SPAG11BQ08648 103 aa10.06□□□□□ -0.8
CXXC1-209ENST00000587342 A0A0J9YXV3 536 aa10.05□□□□□ -0.8
CXXC1-209ENST00000587342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
CXXC1-209ENST00000587342 C7orf33Q8WU49 177 aa10.05□□□□□ -0.8
CXXC1-209ENST00000587342 C2orf48Q96LS8 159 aa10.05□□□□□ -0.8
CXXC1-209ENST00000587342 CAMK2N2Q96S95 79 aa10.05□□□□□ -0.8
CXXC1-209ENST00000587342 RAB5AP20339 215 aa10.04□□□□□ -0.8
CXXC1-209ENST00000587342 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
CXXC1-209ENST00000587342 LINC00474Q9P2X8 69 aa10.04□□□□□ -0.8
CXXC1-209ENST00000587342 LAMTOR2Q9Y2Q5 125 aa10.04□□□□□ -0.8
CXXC1-209ENST00000587342 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
CXXC1-209ENST00000587342 LOC107984640A0A0U1RRK4 108 aa10.03□□□□□ -0.8
CXXC1-209ENST00000587342 APOMO95445 188 aa10.03□□□□□ -0.8
CXXC1-209ENST00000587342 GAGE2BQ13066 116 aa10.03□□□□□ -0.8
CXXC1-209ENST00000587342 ZC2HC1BQ5TFG8 222 aa10.03□□□□□ -0.8
CXXC1-209ENST00000587342 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
CXXC1-209ENST00000587342 Q8N8P6 123 aa10.03□□□□□ -0.8
CXXC1-209ENST00000587342 OR10D4PQ8NGN7 298 aa10.03□□□□□ -0.8
CXXC1-209ENST00000587342 ORAOV1Q8WV07 137 aa10.03□□□□□ -0.8
CXXC1-209ENST00000587342 A0A1W2PNN7 141 aa10.02□□□□□ -0.81
CXXC1-209ENST00000587342 TMEM218A2RU14 115 aa10.02□□□□□ -0.81
CXXC1-209ENST00000587342 IFI27P40305 119 aaPredicted RBP10.02□□□□□ -0.81
CXXC1-209ENST00000587342 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.81
CXXC1-209ENST00000587342 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
CXXC1-209ENST00000587342 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
CXXC1-209ENST00000587342 UQCC3Q6UW78 93 aa10.01□□□□□ -0.81
CXXC1-209ENST00000587342 TNXBP22105 4242 aa10□□□□□ -0.81
CXXC1-209ENST00000587342 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
CXXC1-209ENST00000587342 TMEM141Q96I45 108 aa10□□□□□ -0.81
CXXC1-209ENST00000587342 IMMP2LQ96T52 175 aa10□□□□□ -0.81
CXXC1-209ENST00000587342 A0A087WZ39 114 aa9.99□□□□□ -0.81
CXXC1-209ENST00000587342 UBE2D1P51668 147 aa9.99□□□□□ -0.81
CXXC1-209ENST00000587342 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
CXXC1-209ENST00000587342 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
CXXC1-209ENST00000587342 KIAA1644Q3SXP7 199 aa9.99□□□□□ -0.81
CXXC1-209ENST00000587342 CYSLTR1Q9Y271 337 aa9.99□□□□□ -0.81
CXXC1-209ENST00000587342 IGIPA6NJ69 53 aa9.98□□□□□ -0.81
CXXC1-209ENST00000587342 RNF151Q2KHN1 245 aa9.98□□□□□ -0.81
CXXC1-209ENST00000587342 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
CXXC1-209ENST00000587342 CTDSP1Q9GZU7 261 aa9.98□□□□□ -0.81
CXXC1-209ENST00000587342 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
CXXC1-209ENST00000587342 C6orf48Q9UBA6 75 aa9.98□□□□□ -0.81
CXXC1-209ENST00000587342 TGIF2-C20orf24A0A0A6YYL0 155 aa9.97□□□□□ -0.81
CXXC1-209ENST00000587342 C9orf116Q5BN46 136 aaPredicted RBP9.97□□□□□ -0.81
CXXC1-209ENST00000587342 COMMD7Q86VX2 200 aa9.97□□□□□ -0.81
CXXC1-209ENST00000587342 AMELXQ99217 191 aa9.97□□□□□ -0.81
CXXC1-209ENST00000587342 ORMDL2Q53FV1 153 aa9.96□□□□□ -0.82
CXXC1-209ENST00000587342 TEX43Q6ZNM6 134 aa9.96□□□□□ -0.82
CXXC1-209ENST00000587342 FAM168BA1KXE4 195 aa9.95□□□□□ -0.82
CXXC1-209ENST00000587342 NDUFA1O15239 70 aa9.95□□□□□ -0.82
CXXC1-209ENST00000587342 SERTAD4-AS1Q5TG53 156 aa9.95□□□□□ -0.82
CXXC1-209ENST00000587342 C2orf82Q6UX34 121 aa9.95□□□□□ -0.82
CXXC1-209ENST00000587342 Q6ZRP5 223 aa9.95□□□□□ -0.82
CXXC1-209ENST00000587342 SEC11CQ9BY50 192 aa9.95□□□□□ -0.82
CXXC1-209ENST00000587342 NXT2Q9NPJ8 142 aaKnown RBP9.95□□□□□ -0.82
CXXC1-209ENST00000587342 TRAV9-1A0A075B6T8 112 aa9.94□□□□□ -0.82
CXXC1-209ENST00000587342 F8WDY8 70 aa9.93□□□□□ -0.82
CXXC1-209ENST00000587342 K7EMI3 77 aa9.93□□□□□ -0.82
CXXC1-209ENST00000587342 SRSF9Q13242 221 aaKnown RBP eCLIP9.93□□□□□ -0.82
CXXC1-209ENST00000587342 ODF1Q14990 250 aa9.93□□□□□ -0.82
CXXC1-209ENST00000587342 PHF5AQ7RTV0 110 aaKnown RBP9.93□□□□□ -0.82
CXXC1-209ENST00000587342 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
CXXC1-209ENST00000587342 KRTAP7-1Q8IUC3 87 aa9.93□□□□□ -0.82
CXXC1-209ENST00000587342 TLX1NBP0CAT3 122 aa9.92□□□□□ -0.82
CXXC1-209ENST00000587342 C10orf91Q5T1B1 145 aa9.92□□□□□ -0.82
CXXC1-209ENST00000587342 Q6ZN92 141 aa9.92□□□□□ -0.82
CXXC1-209ENST00000587342 FAM19A3Q7Z5A8 133 aa9.92□□□□□ -0.82
CXXC1-209ENST00000587342 C2orf88Q9BSF0 95 aa9.92□□□□□ -0.82
CXXC1-209ENST00000587342 VCX2Q9H322 139 aa9.92□□□□□ -0.82
CXXC1-209ENST00000587342 NPSP0C0P6 89 aa9.91□□□□□ -0.82
CXXC1-209ENST00000587342 TOMM6Q96B49 74 aa9.91□□□□□ -0.82
CXXC1-209ENST00000587342 LINC01600Q96MT4 127 aa9.91□□□□□ -0.82
CXXC1-209ENST00000587342 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
CXXC1-209ENST00000587342 UBR4Q5T4S7 5183 aa9.9□□□□□ -0.82
CXXC1-209ENST00000587342 SPINK6Q6UWN8 80 aa9.9□□□□□ -0.82
CXXC1-209ENST00000587342 LINC01561Q8N1V8 128 aa9.9□□□□□ -0.82
CXXC1-209ENST00000587342 TIMM17AQ99595 171 aa9.9□□□□□ -0.82
CXXC1-209ENST00000587342 ALKBH7Q9BT30 221 aaPredicted RBP9.9□□□□□ -0.82
CXXC1-209ENST00000587342 GNB1LQ9BYB4 327 aa9.9□□□□□ -0.82
CXXC1-209ENST00000587342 PLA2G2DQ9UNK4 145 aa9.9□□□□□ -0.82
CXXC1-209ENST00000587342 CARHSP1Q9Y2V2 147 aaKnown RBP9.9□□□□□ -0.82
CXXC1-209ENST00000587342 LINC01546A6NGU7 62 aa9.89□□□□□ -0.83
CXXC1-209ENST00000587342 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
CXXC1-209ENST00000587342 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
CXXC1-209ENST00000587342 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
CXXC1-209ENST00000587342 FAM19A5Q7Z5A7 132 aaPredicted RBP9.88□□□□□ -0.83
CXXC1-209ENST00000587342 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
CXXC1-209ENST00000587342 S100PP25815 95 aa9.87□□□□□ -0.83
CXXC1-209ENST00000587342 C9orf129Q5T035 196 aaKnown RBP9.87□□□□□ -0.83
CXXC1-209ENST00000587342 RHEBQ15382 184 aa9.86□□□□□ -0.83
CXXC1-209ENST00000587342 ERASQ7Z444 233 aa9.86□□□□□ -0.83
CXXC1-209ENST00000587342 MRPL18Q9H0U6 180 aaKnown RBP9.86□□□□□ -0.83
CXXC1-209ENST00000587342 RPS10P5Q9NQ39 176 aa9.86□□□□□ -0.83
CXXC1-209ENST00000587342 TOMM7Q9P0U1 55 aa9.86□□□□□ -0.83
CXXC1-209ENST00000587342 NDUFC2-KCTD14E9PQ53 114 aa9.85□□□□□ -0.83
CXXC1-209ENST00000587342 MT-ND6P03923 174 aa9.85□□□□□ -0.83
CXXC1-209ENST00000587342 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
CXXC1-209ENST00000587342 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms