RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 MRPL18Q9H0U6 180 aaKnown RBP6.49□□□□□ -1.37
GGA3-219ENST00000584550 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
GGA3-219ENST00000584550 COX19Q49B96 90 aa6.48□□□□□ -1.37
GGA3-219ENST00000584550 LINC01600Q96MT4 127 aa6.48□□□□□ -1.37
GGA3-219ENST00000584550 TIMM21Q9BVV7 248 aa6.48□□□□□ -1.37
GGA3-219ENST00000584550 NXT2Q9NPJ8 142 aaKnown RBP6.48□□□□□ -1.37
GGA3-219ENST00000584550 SPANXA1Q9NS26 97 aa6.48□□□□□ -1.37
GGA3-219ENST00000584550 CSDC2Q9Y534 153 aaKnown RBP6.48□□□□□ -1.37
GGA3-219ENST00000584550 MT-ND6P03923 174 aa6.47□□□□□ -1.37
GGA3-219ENST00000584550 FOXI1Q12951 378 aa6.47□□□□□ -1.37
GGA3-219ENST00000584550 HIGD2BQ4VC39 106 aa6.47□□□□□ -1.37
GGA3-219ENST00000584550 CFAP161Q6P656 301 aa6.47□□□□□ -1.37
GGA3-219ENST00000584550 PRSS3P2Q8NHM4 247 aa6.47□□□□□ -1.37
GGA3-219ENST00000584550 ALKBH7Q9BT30 221 aaPredicted RBP6.47□□□□□ -1.37
GGA3-219ENST00000584550 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
GGA3-219ENST00000584550 TRAPPC1Q9Y5R8 145 aa6.47□□□□□ -1.37
GGA3-219ENST00000584550 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.38
GGA3-219ENST00000584550 C1orf196B1AJZ1 125 aa6.46□□□□□ -1.38
GGA3-219ENST00000584550 ORMDL2Q53FV1 153 aa6.46□□□□□ -1.38
GGA3-219ENST00000584550 C2orf66Q6UXQ4 117 aa6.46□□□□□ -1.38
GGA3-219ENST00000584550 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
GGA3-219ENST00000584550 C15orf56Q8N910 161 aa6.46□□□□□ -1.38
GGA3-219ENST00000584550 C9orf163Q8N9P6 203 aa6.46□□□□□ -1.38
GGA3-219ENST00000584550 CYSLTR1Q9Y271 337 aa6.46□□□□□ -1.38
GGA3-219ENST00000584550 MUC2Q02817 5179 aa6.45□□□□□ -1.38
GGA3-219ENST00000584550 IFITM10A6NMD0 228 aa6.45□□□□□ -1.38
GGA3-219ENST00000584550 RAB5BP61020 215 aa6.45□□□□□ -1.38
GGA3-219ENST00000584550 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
GGA3-219ENST00000584550 CBLN2Q8IUK8 224 aa6.45□□□□□ -1.38
GGA3-219ENST00000584550 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
GGA3-219ENST00000584550 SMCO4Q9NRQ5 59 aa6.45□□□□□ -1.38
GGA3-219ENST00000584550 SMIM6P0DI80 62 aa6.44□□□□□ -1.38
GGA3-219ENST00000584550 MALP21145 153 aa6.44□□□□□ -1.38
GGA3-219ENST00000584550 MRPS36P82909 103 aaKnown RBP6.44□□□□□ -1.38
GGA3-219ENST00000584550 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
GGA3-219ENST00000584550 FA2HQ7L5A8 372 aa6.44□□□□□ -1.38
GGA3-219ENST00000584550 C5orf38Q86SI9 138 aa6.44□□□□□ -1.38
GGA3-219ENST00000584550 LINC00526Q96FQ7 95 aa6.44□□□□□ -1.38
GGA3-219ENST00000584550 IGLV4-3A0A075B6K6 122 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 A0A087WYN8 130 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 IGHV1-58A0A0C4DH39 117 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 K7EMI3 77 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 COX7A2LO14548 114 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 SLPIP03973 132 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 CHTF8P0CG12 524 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 Q6ZN92 141 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 TMEM141Q96I45 108 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 C12orf57Q99622 126 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 PYGO1Q9Y3Y4 419 aa6.43□□□□□ -1.38
GGA3-219ENST00000584550 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
GGA3-219ENST00000584550 A0A0J9YXV3 536 aa6.42□□□□□ -1.38
GGA3-219ENST00000584550 G0S2P27469 103 aa6.42□□□□□ -1.38
GGA3-219ENST00000584550 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
GGA3-219ENST00000584550 TEX43Q6ZNM6 134 aa6.42□□□□□ -1.38
GGA3-219ENST00000584550 YPEL4Q96NS1 127 aa6.42□□□□□ -1.38
GGA3-219ENST00000584550 VCX2Q9H322 139 aa6.42□□□□□ -1.38
GGA3-219ENST00000584550 GVQW2A0A096LPI5 108 aaPredicted RBP6.41□□□□□ -1.38
GGA3-219ENST00000584550 COLCA2A8K830 154 aa6.41□□□□□ -1.38
GGA3-219ENST00000584550 ZNF561-AS1K7EIQ3 104 aa6.41□□□□□ -1.38
GGA3-219ENST00000584550 AKR1D1P51857 326 aa6.41□□□□□ -1.38
GGA3-219ENST00000584550 CNBPP62633 177 aaKnown RBP6.41□□□□□ -1.38
GGA3-219ENST00000584550 TOMM6Q96B49 74 aa6.41□□□□□ -1.38
GGA3-219ENST00000584550 SCGB3A1Q96QR1 104 aa6.41□□□□□ -1.38
GGA3-219ENST00000584550 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
GGA3-219ENST00000584550 IGHV3-64A0A075B6Q5 118 aa6.4□□□□□ -1.38
GGA3-219ENST00000584550 IGIPA6NJ69 53 aa6.4□□□□□ -1.38
GGA3-219ENST00000584550 CIRBPQ14011 172 aaKnown RBP6.4□□□□□ -1.38
GGA3-219ENST00000584550 C18orf32Q8TCD1 76 aa6.4□□□□□ -1.38
GGA3-219ENST00000584550 IGLV4-69A0A075B6H9 119 aa6.39□□□□□ -1.39
GGA3-219ENST00000584550 C5orf52A6NGY3 159 aa6.39□□□□□ -1.39
GGA3-219ENST00000584550 APOMO95445 188 aa6.39□□□□□ -1.39
GGA3-219ENST00000584550 UBE2D1P51668 147 aa6.39□□□□□ -1.39
GGA3-219ENST00000584550 COX6A2Q02221 97 aa6.39□□□□□ -1.39
GGA3-219ENST00000584550 LINC00242Q5T6M2 205 aa6.39□□□□□ -1.39
GGA3-219ENST00000584550 C7orf33Q8WU49 177 aa6.39□□□□□ -1.39
GGA3-219ENST00000584550 IGHV3OR16-9A0A0B4J2B5 98 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 LINC01546A6NGU7 62 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 S100A6P06703 90 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 LINC00614P0C842 121 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 PRR3P79522 188 aaKnown RBP6.38□□□□□ -1.39
GGA3-219ENST00000584550 SPAG11BQ08648 103 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 SYCNQ0VAF6 134 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 PMCHL1Q16048 86 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 PAPPA-AS1Q5QFB9 102 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 LINC00173Q6ZV60 143 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 ERASQ7Z444 233 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 ORAOV1Q8WV07 137 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 CARD19Q96LW7 228 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 AMELXQ99217 191 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 TIMM17AQ99595 171 aa6.38□□□□□ -1.39
GGA3-219ENST00000584550 PCP4L1A6NKN8 68 aa6.37□□□□□ -1.39
GGA3-219ENST00000584550 NPSP0C0P6 89 aa6.37□□□□□ -1.39
GGA3-219ENST00000584550 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
GGA3-219ENST00000584550 CAMK2N2Q96S95 79 aa6.37□□□□□ -1.39
GGA3-219ENST00000584550 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
GGA3-219ENST00000584550 IGKV2-24A0A0C4DH68 120 aa6.36□□□□□ -1.39
GGA3-219ENST00000584550 TRGC2P03986 189 aa6.36□□□□□ -1.39
GGA3-219ENST00000584550 NDUFA6P56556 154 aa6.36□□□□□ -1.39
GGA3-219ENST00000584550 REG3GQ6UW15 175 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms