RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 KNCNA6PVL3 124 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 A8MWV9 139 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 F6UB75 175 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 M0R3E3 92 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 SPINK8P0C7L1 97 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 ID1P41134 155 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 UBE2D1P51668 147 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 TMEM78Q5T7P6 136 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 CFAP126Q5VTH2 177 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 TEN1Q86WV5 123 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 RNF182Q8N6D2 247 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 LINC00612Q8N6U2 182 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 POM121L12Q8N7R1 296 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 TOMM6Q96B49 74 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 LINC01600Q96MT4 127 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 C18orf15Q96N68 181 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 ODF3Q96PU9 254 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 SCGB3A1Q96QR1 104 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 SMIM2Q9BVW6 85 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 MRPL35Q9NZE8 188 aaKnown RBP3.62□□□□□ -1.83
NF1-223ENST00000584328 TP53TG1Q9Y2A0 90 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
NF1-223ENST00000584328 NBEAL2Q6ZNJ1 2754 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 TMSB15BA0A087X1C1 80 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 TRBV7-9A0A0J9YWB2 115 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 SMKR1H3BMG3 65 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 SCGB1C2P0DMR2 95 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 UBE2D3P61077 147 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 UBE2D2P62837 147 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 ERCC8Q13216 396 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 SRSF9Q13242 221 aaKnown RBP eCLIP3.61□□□□□ -1.83
NF1-223ENST00000584328 MRPL23Q16540 153 aaKnown RBP3.61□□□□□ -1.83
NF1-223ENST00000584328 DEFB121Q5J5C9 76 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 SPANXN1Q5VSR9 72 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 ZFAND6Q6FIF0 208 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 MORN3Q6PF18 240 aaPredicted RBP3.61□□□□□ -1.83
NF1-223ENST00000584328 Q6Q795 121 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 TMEM141Q96I45 108 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 LINC00477Q96M19 166 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 EDA2RQ9HAV5 297 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 PRR34Q9NV39 138 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 ERG28Q9UKR5 140 aa3.61□□□□□ -1.83
NF1-223ENST00000584328 STAB2Q8WWQ8 2551 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 IGKV2-40A0A087WW87 121 aaPredicted RBP3.6□□□□□ -1.83
NF1-223ENST00000584328 KLLNB2CW77 178 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 K7ERJ3 54 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 TSPAN13O95857 204 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 IGKV2D-40P01614 121 aaPredicted RBP3.6□□□□□ -1.83
NF1-223ENST00000584328 RBMY1A1P0DJD3 496 aaKnown RBP3.6□□□□□ -1.83
NF1-223ENST00000584328 RBMY1CP0DJD4 496 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 ZNF80P51504 273 aaPredicted RBP3.6□□□□□ -1.83
NF1-223ENST00000584328 APOC4P55056 127 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 RBMY1FQ15415 496 aaKnown RBP3.6□□□□□ -1.83
NF1-223ENST00000584328 SCGB1D4Q6XE38 83 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 Q6ZUT4 128 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 STHQ8IWL8 128 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 DPH3P1Q9H4G8 78 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 SPANXCQ9NY87 97 aa3.6□□□□□ -1.83
NF1-223ENST00000584328 TRAV26-1A0A087WT03 109 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.59□□□□□ -1.83
NF1-223ENST00000584328 TRAV21A0A0B4J279 112 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 ZNF815PA8K554 130 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 DUSP14O95147 198 aaKnown RBP3.59□□□□□ -1.83
NF1-223ENST00000584328 P0DMU3 169 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 FAM231AP0DMU4 169 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 FAM231CP0DMU5 169 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 PSMB2P49721 201 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 FXYD7P58549 80 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 C1orf158Q8N1D5 194 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 C10orf126Q8N4M7 172 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 ZFAND2AQ8N6M9 145 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 Q8NAQ8 132 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 PRADC1Q9BSG0 188 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 AGPAT4-IT1Q9H0P7 198 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 C11orf68Q9H3H3 251 aaKnown RBP3.59□□□□□ -1.83
NF1-223ENST00000584328 RETNQ9HD89 108 aa3.59□□□□□ -1.83
NF1-223ENST00000584328 DNAH1Q9P2D7 4330 aa3.59□□□□□ -1.84
NF1-223ENST00000584328 LOC107984156A0A0G2JMH3 177 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 C11orf86A6NJI1 115 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 PMVKQ15126 192 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 DEFB135Q30KP9 77 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 HIGD2BQ4VC39 106 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 PRR9Q5T870 116 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 C2orf66Q6UXQ4 117 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 ARL17AQ8IVW1 177 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 SLC25A29Q8N8R3 303 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 LINC00467Q9BRT7 94 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 PRO1854Q9UHT4 67 aa3.58□□□□□ -1.84
NF1-223ENST00000584328 A0A0B4J2C4 111 aa3.57□□□□□ -1.84
NF1-223ENST00000584328 A0A0J9YY99 117 aa3.57□□□□□ -1.84
NF1-223ENST00000584328 K7EQD1 137 aa3.57□□□□□ -1.84
NF1-223ENST00000584328 SNCGO76070 127 aa3.57□□□□□ -1.84
NF1-223ENST00000584328 PRB4P10163 310 aaPredicted RBP3.57□□□□□ -1.84
NF1-223ENST00000584328 MIFP14174 115 aa3.57□□□□□ -1.84
NF1-223ENST00000584328 S100A4P26447 101 aaKnown RBP3.57□□□□□ -1.84
NF1-223ENST00000584328 RPL13AP40429 203 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms