RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TGIF2-C20orf24A0A0A6YYL0 155 aa6.39□□□□□ -1.39
CASC3-208ENST00000583649 C4orf48Q5BLP8 95 aa6.39□□□□□ -1.39
CASC3-208ENST00000583649 RNASE13Q5GAN3 156 aaKnown RBP6.39□□□□□ -1.39
CASC3-208ENST00000583649 KRTAP7-1Q8IUC3 87 aa6.39□□□□□ -1.39
CASC3-208ENST00000583649 C11orf52Q96A22 123 aa6.39□□□□□ -1.39
CASC3-208ENST00000583649 H2AFB1P0C5Y9 115 aa6.38□□□□□ -1.39
CASC3-208ENST00000583649 UBE2AP49459 152 aa6.38□□□□□ -1.39
CASC3-208ENST00000583649 C9orf129Q5T035 196 aaKnown RBP6.38□□□□□ -1.39
CASC3-208ENST00000583649 TIMM21Q9BVV7 248 aa6.38□□□□□ -1.39
CASC3-208ENST00000583649 RNASE7Q9H1E1 156 aaKnown RBP6.38□□□□□ -1.39
CASC3-208ENST00000583649 NDUFA13Q9P0J0 144 aa6.38□□□□□ -1.39
CASC3-208ENST00000583649 TP73-AS1Q9UF72 201 aa6.38□□□□□ -1.39
CASC3-208ENST00000583649 IGHV3OR16-9A0A0B4J2B5 98 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 TEX46H3BTG2 121 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 TCAPO15273 167 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 POLR2KP53803 58 aaKnown RBP6.37□□□□□ -1.39
CASC3-208ENST00000583649 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 MRPL55Q7Z7F7 128 aaKnown RBP6.37□□□□□ -1.39
CASC3-208ENST00000583649 NUDT10Q8NFP7 164 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 ANAPC11Q9NYG5 84 aa6.37□□□□□ -1.39
CASC3-208ENST00000583649 ZNF727A8MUV8 499 aa6.36□□□□□ -1.39
CASC3-208ENST00000583649 PDE6DO43924 150 aa6.36□□□□□ -1.39
CASC3-208ENST00000583649 PRSS2P07478 247 aa6.36□□□□□ -1.39
CASC3-208ENST00000583649 Q6ZUT4 128 aa6.36□□□□□ -1.39
CASC3-208ENST00000583649 GNG13Q9P2W3 67 aa6.36□□□□□ -1.39
CASC3-208ENST00000583649 NDUFA12Q9UI09 145 aa6.36□□□□□ -1.39
CASC3-208ENST00000583649 GIPP09681 153 aaPredicted RBP6.35□□□□□ -1.39
CASC3-208ENST00000583649 FOXA3P55318 350 aaPredicted RBP6.35□□□□□ -1.39
CASC3-208ENST00000583649 CKS1BP61024 79 aa6.35□□□□□ -1.39
CASC3-208ENST00000583649 HBBP68871 147 aa6.35□□□□□ -1.39
CASC3-208ENST00000583649 LINC00242Q5T6M2 205 aa6.35□□□□□ -1.39
CASC3-208ENST00000583649 IFITM10A6NMD0 228 aa6.34□□□□□ -1.39
CASC3-208ENST00000583649 PPP1R2P9O14990 202 aa6.34□□□□□ -1.39
CASC3-208ENST00000583649 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
CASC3-208ENST00000583649 MED9Q9NWA0 146 aa6.34□□□□□ -1.39
CASC3-208ENST00000583649 TRBV20OR9-2A0A075B6H5 130 aa6.33□□□□□ -1.4
CASC3-208ENST00000583649 A8MWL6 223 aa6.33□□□□□ -1.4
CASC3-208ENST00000583649 DAND5Q8N907 189 aa6.33□□□□□ -1.4
CASC3-208ENST00000583649 SPANXA1Q9NS26 97 aa6.33□□□□□ -1.4
CASC3-208ENST00000583649 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.32□□□□□ -1.4
CASC3-208ENST00000583649 SUMO2P61956 95 aaKnown RBP6.32□□□□□ -1.4
CASC3-208ENST00000583649 TMEM191AQ9H0A3 160 aa6.32□□□□□ -1.4
CASC3-208ENST00000583649 KIAA0087Q14695 138 aa6.31□□□□□ -1.4
CASC3-208ENST00000583649 Q5BKY6 102 aa6.31□□□□□ -1.4
CASC3-208ENST00000583649 C2orf82Q6UX34 121 aa6.31□□□□□ -1.4
CASC3-208ENST00000583649 LINC00469Q8N7U9 141 aa6.31□□□□□ -1.4
CASC3-208ENST00000583649 XAGE1AQ9HD64 81 aa6.31□□□□□ -1.4
CASC3-208ENST00000583649 RPL37AP8A6NKH3 93 aa6.3□□□□□ -1.4
CASC3-208ENST00000583649 M0R2T5 61 aa6.3□□□□□ -1.4
CASC3-208ENST00000583649 ARPC5O15511 151 aa6.3□□□□□ -1.4
CASC3-208ENST00000583649 MRPS36P82909 103 aaKnown RBP6.3□□□□□ -1.4
CASC3-208ENST00000583649 C6orf226Q5I0X4 101 aa6.3□□□□□ -1.4
CASC3-208ENST00000583649 LINC01561Q8N1V8 128 aa6.3□□□□□ -1.4
CASC3-208ENST00000583649 A0A1B0GUT8 65 aa6.29□□□□□ -1.4
CASC3-208ENST00000583649 GATCO43716 136 aaKnown RBP6.29□□□□□ -1.4
CASC3-208ENST00000583649 RAB4AP20338 218 aa6.29□□□□□ -1.4
CASC3-208ENST00000583649 IFITM3Q01628 133 aa6.29□□□□□ -1.4
CASC3-208ENST00000583649 KRTAP4-1Q9BYQ7 146 aa6.29□□□□□ -1.4
CASC3-208ENST00000583649 TNFRSF6BO95407 300 aa6.28□□□□□ -1.4
CASC3-208ENST00000583649 MT1HP80294 61 aa6.28□□□□□ -1.4
CASC3-208ENST00000583649 FAM19A2Q8N3H0 131 aa6.28□□□□□ -1.4
CASC3-208ENST00000583649 NKAPP1Q8N9T2 125 aa6.28□□□□□ -1.4
CASC3-208ENST00000583649 LINC00167Q96N53 147 aa6.28□□□□□ -1.4
CASC3-208ENST00000583649 TAGLN2P37802 199 aaKnown RBP6.27□□□□□ -1.41
CASC3-208ENST00000583649 IFI27P40305 119 aaPredicted RBP6.27□□□□□ -1.41
CASC3-208ENST00000583649 RPL32P62910 135 aaKnown RBP6.27□□□□□ -1.41
CASC3-208ENST00000583649 Q6ZN92 141 aa6.27□□□□□ -1.41
CASC3-208ENST00000583649 AMN1Q8IY45 258 aa6.27□□□□□ -1.41
CASC3-208ENST00000583649 GNB1LQ9BYB4 327 aa6.27□□□□□ -1.41
CASC3-208ENST00000583649 TOMM7Q9P0U1 55 aa6.27□□□□□ -1.41
CASC3-208ENST00000583649 SPINK1P00995 79 aa6.26□□□□□ -1.41
CASC3-208ENST00000583649 CT83Q5H943 113 aa6.26□□□□□ -1.41
CASC3-208ENST00000583649 KRTAP13-1Q8IUC0 172 aa6.26□□□□□ -1.41
CASC3-208ENST00000583649 C20orf78Q9BR46 151 aa6.26□□□□□ -1.41
CASC3-208ENST00000583649 C2orf88Q9BSF0 95 aa6.26□□□□□ -1.41
CASC3-208ENST00000583649 ALKBH7Q9BT30 221 aaPredicted RBP6.26□□□□□ -1.41
CASC3-208ENST00000583649 KANTRA0A1W2PQU2 76 aa6.25□□□□□ -1.41
CASC3-208ENST00000583649 GAGE10A6NGK3 116 aa6.25□□□□□ -1.41
CASC3-208ENST00000583649 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
CASC3-208ENST00000583649 RPL39P62891 51 aaKnown RBP6.25□□□□□ -1.41
CASC3-208ENST00000583649 PNRC1Q12796 327 aaPredicted RBP6.25□□□□□ -1.41
CASC3-208ENST00000583649 RIGQ13278 110 aa6.25□□□□□ -1.41
CASC3-208ENST00000583649 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
CASC3-208ENST00000583649 OCC1Q8TAD7 63 aa6.25□□□□□ -1.41
CASC3-208ENST00000583649 LINC00862A6NCI5 91 aa6.24□□□□□ -1.41
CASC3-208ENST00000583649 F8VRH5 84 aa6.24□□□□□ -1.41
CASC3-208ENST00000583649 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
CASC3-208ENST00000583649 ZNF345Q14585 488 aa6.24□□□□□ -1.41
CASC3-208ENST00000583649 FAM19A1Q7Z5A9 133 aa6.24□□□□□ -1.41
CASC3-208ENST00000583649 Q8IZM0 81 aa6.24□□□□□ -1.41
CASC3-208ENST00000583649 HIGD1CA8MV81 97 aa6.23□□□□□ -1.41
CASC3-208ENST00000583649 SMKR1H3BMG3 65 aa6.23□□□□□ -1.41
CASC3-208ENST00000583649 K7EN84 100 aa6.23□□□□□ -1.41
CASC3-208ENST00000583649 CXCL5P42830 114 aa6.23□□□□□ -1.41
CASC3-208ENST00000583649 TEX43Q6ZNM6 134 aa6.23□□□□□ -1.41
CASC3-208ENST00000583649 FAM231DQ6ZW35 169 aa6.23□□□□□ -1.41
CASC3-208ENST00000583649 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms